RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 FAM98CQ17RN3 349 aaKnown RBP20.62■□□□□ 0.89
ERCC1-205ENST00000587888 TRPM3Q9HCF6 1732 aaPredicted RBP20.61■□□□□ 0.89
ERCC1-205ENST00000587888 CDK19Q9BWU1 502 aa20.61■□□□□ 0.89
ERCC1-205ENST00000587888 ALS2Q96Q42 1657 aa20.58■□□□□ 0.89
ERCC1-205ENST00000587888 NUTM2GQ5VZR2 741 aa20.58■□□□□ 0.89
ERCC1-205ENST00000587888 PRDM11Q9NQV5 511 aa20.58■□□□□ 0.89
ERCC1-205ENST00000587888 ARHGEF28Q8N1W1 1705 aaKnown RBP20.56■□□□□ 0.88
ERCC1-205ENST00000587888 NBPF1Q3BBV0 1214 aa20.55■□□□□ 0.88
ERCC1-205ENST00000587888 COL14A1Q05707 1796 aaKnown RBP20.54■□□□□ 0.88
ERCC1-205ENST00000587888 CHRNA2Q15822 529 aa20.54■□□□□ 0.88
ERCC1-205ENST00000587888 FAM182BQ5T319 152 aa20.54■□□□□ 0.88
ERCC1-205ENST00000587888 SPATA31A5Q5VU36 1347 aa20.53■□□□□ 0.88
ERCC1-205ENST00000587888 SPATA31A7Q8IWB4 1347 aa20.53■□□□□ 0.88
ERCC1-205ENST00000587888 EP400Q96L91 3159 aa20.53■□□□□ 0.88
ERCC1-205ENST00000587888 ZC3H6P61129 1189 aaKnown RBP20.53■□□□□ 0.88
ERCC1-205ENST00000587888 NBPF8Q3BBV2 869 aa20.53■□□□□ 0.88
ERCC1-205ENST00000587888 CCDC61Q9Y6R9 512 aa20.53■□□□□ 0.88
ERCC1-205ENST00000587888 NRAPQ86VF7 1730 aa20.53■□□□□ 0.88
ERCC1-205ENST00000587888 ACEP12821 1306 aa20.53■□□□□ 0.88
ERCC1-205ENST00000587888 ATP7BP35670 1465 aa20.52■□□□□ 0.88
ERCC1-205ENST00000587888 STRN4Q9NRL3 753 aa20.52■□□□□ 0.88
ERCC1-205ENST00000587888 ITSN1Q15811 1721 aa20.5■□□□□ 0.87
ERCC1-205ENST00000587888 KIAA0232Q92628 1395 aa20.5■□□□□ 0.87
ERCC1-205ENST00000587888 BAG6P46379 1132 aa20.5■□□□□ 0.87
ERCC1-205ENST00000587888 PLEKHG3A1L390 1219 aa20.49■□□□□ 0.87
ERCC1-205ENST00000587888 SRPK2P78362 688 aaKnown RBP20.49■□□□□ 0.87
ERCC1-205ENST00000587888 CRYBG1Q9Y4K1 1723 aa20.48■□□□□ 0.87
ERCC1-205ENST00000587888 EVA1CP58658 441 aa20.48■□□□□ 0.87
ERCC1-205ENST00000587888 ABTB2Q8N961 1025 aa20.48■□□□□ 0.87
ERCC1-205ENST00000587888 USP35Q9P2H5 1018 aa20.47■□□□□ 0.87
ERCC1-205ENST00000587888 POLR3AO14802 1390 aaPredicted RBP20.46■□□□□ 0.87
ERCC1-205ENST00000587888 EN1Q05925 392 aaPredicted RBP20.46■□□□□ 0.87
ERCC1-205ENST00000587888 CABP2Q9NPB3 220 aa20.46■□□□□ 0.87
ERCC1-205ENST00000587888 SPATA31A1Q5TZJ5 1347 aa20.46■□□□□ 0.87
ERCC1-205ENST00000587888 PSDA5PKW4 1024 aaPredicted RBP20.45■□□□□ 0.86
ERCC1-205ENST00000587888 KIAA1210Q9ULL0 1709 aa20.44■□□□□ 0.86
ERCC1-205ENST00000587888 CENPJQ9HC77 1338 aaPredicted RBP20.44■□□□□ 0.86
ERCC1-205ENST00000587888 PHRF1Q9P1Y6 1649 aaKnown RBP20.42■□□□□ 0.86
ERCC1-205ENST00000587888 NLRP13Q86W25 1043 aa20.41■□□□□ 0.86
ERCC1-205ENST00000587888 L3MBTL2Q969R5 705 aa20.41■□□□□ 0.86
ERCC1-205ENST00000587888 PPIP5K1Q6PFW1 1433 aa20.41■□□□□ 0.86
ERCC1-205ENST00000587888 TOPAZ1Q8N9V7 1692 aa20.41■□□□□ 0.86
ERCC1-205ENST00000587888 LARP1Q6PKG0 1096 aaKnown RBP20.4■□□□□ 0.86
ERCC1-205ENST00000587888 ZBTB7CA1YPR0 619 aa20.39■□□□□ 0.85
ERCC1-205ENST00000587888 TRIM37O94972 964 aa20.39■□□□□ 0.85
ERCC1-205ENST00000587888 FAM196AQ6ZSG2 479 aa20.39■□□□□ 0.85
ERCC1-205ENST00000587888 SIN3AQ96ST3 1273 aa20.39■□□□□ 0.85
ERCC1-205ENST00000587888 CABP1Q9NZU7 370 aa20.39■□□□□ 0.85
ERCC1-205ENST00000587888 THSD7AQ9UPZ6 1657 aa20.38■□□□□ 0.85
ERCC1-205ENST00000587888 GCP02774 474 aa20.38■□□□□ 0.85
ERCC1-205ENST00000587888 PDE3BQ13370 1112 aa20.38■□□□□ 0.85
ERCC1-205ENST00000587888 NEUROD1Q13562 356 aa20.38■□□□□ 0.85
ERCC1-205ENST00000587888 EZH2Q15910 746 aaKnown RBP20.37■□□□□ 0.85
ERCC1-205ENST00000587888 SSH2Q76I76 1423 aa20.36■□□□□ 0.85
ERCC1-205ENST00000587888 RGPD1P0DJD0 1748 aa20.36■□□□□ 0.85
ERCC1-205ENST00000587888 BARGINQ6ZT62 677 aa20.36■□□□□ 0.85
ERCC1-205ENST00000587888 CAMTA1Q9Y6Y1 1673 aa20.35■□□□□ 0.85
ERCC1-205ENST00000587888 USP19O94966 1318 aa20.35■□□□□ 0.85
ERCC1-205ENST00000587888 APBA3O96018 575 aa20.35■□□□□ 0.85
ERCC1-205ENST00000587888 NLRP6P59044 892 aa20.35■□□□□ 0.85
ERCC1-205ENST00000587888 R3HDM1Q15032 1099 aaKnown RBP20.35■□□□□ 0.85
ERCC1-205ENST00000587888 TCP11L2Q8N4U5 519 aa20.35■□□□□ 0.85
ERCC1-205ENST00000587888 CPDO75976 1380 aa20.34■□□□□ 0.85
ERCC1-205ENST00000587888 NRKQ7Z2Y5 1582 aa20.34■□□□□ 0.85
ERCC1-205ENST00000587888 QRICH2Q9H0J4 1663 aa20.32■□□□□ 0.84
ERCC1-205ENST00000587888 CAMKK2Q96RR4 588 aa20.32■□□□□ 0.84
ERCC1-205ENST00000587888 SRCAPQ6ZRS2 3230 aa20.32■□□□□ 0.84
ERCC1-205ENST00000587888 EVC2Q86UK5 1308 aa20.31■□□□□ 0.84
ERCC1-205ENST00000587888 THRAP3Q9Y2W1 955 aaKnown RBP20.3■□□□□ 0.84
ERCC1-205ENST00000587888 TNS1Q9HBL0 1735 aaKnown RBP20.3■□□□□ 0.84
ERCC1-205ENST00000587888 USP6P35125 1406 aa20.29■□□□□ 0.84
ERCC1-205ENST00000587888 BRD4O60885 1362 aaPredicted RBP20.29■□□□□ 0.84
ERCC1-205ENST00000587888 LMO7Q8WWI1 1683 aa20.29■□□□□ 0.84
ERCC1-205ENST00000587888 DISP2A7MBM2 1401 aa20.28■□□□□ 0.84
ERCC1-205ENST00000587888 ROCK2O75116 1388 aaKnown RBP20.27■□□□□ 0.84
ERCC1-205ENST00000587888 LRP5O75197 1615 aa20.27■□□□□ 0.83
ERCC1-205ENST00000587888 COL5A2P05997 1499 aaPredicted RBP20.26■□□□□ 0.83
ERCC1-205ENST00000587888 SOX12O15370 315 aa20.25■□□□□ 0.83
ERCC1-205ENST00000587888 TOM1L2Q6ZVM7 507 aa20.25■□□□□ 0.83
ERCC1-205ENST00000587888 ZNF692Q9BU19 519 aaPredicted RBP20.25■□□□□ 0.83
ERCC1-205ENST00000587888 AATKQ6ZMQ8 1374 aa20.24■□□□□ 0.83
ERCC1-205ENST00000587888 AXIN2Q9Y2T1 843 aa20.24■□□□□ 0.83
ERCC1-205ENST00000587888 CRB1P82279 1406 aa20.24■□□□□ 0.83
ERCC1-205ENST00000587888 TRPM1Q7Z4N2 1603 aa20.24■□□□□ 0.83
ERCC1-205ENST00000587888 TTC21BQ7Z4L5 1316 aa20.23■□□□□ 0.83
ERCC1-205ENST00000587888 NBPF14Q5TI25 921 aa20.22■□□□□ 0.83
ERCC1-205ENST00000587888 PARD3Q8TEW0 1356 aa20.21■□□□□ 0.83
ERCC1-205ENST00000587888 DDB1Q16531 1140 aa20.2■□□□□ 0.82
ERCC1-205ENST00000587888 KCNH5Q8NCM2 988 aa20.2■□□□□ 0.82
ERCC1-205ENST00000587888 SLIT3O75094 1523 aa20.2■□□□□ 0.82
ERCC1-205ENST00000587888 CSB-PGBD3P0DP91 1061 aa20.19■□□□□ 0.82
ERCC1-205ENST00000587888 ARHGEF25Q86VW2 580 aa20.19■□□□□ 0.82
ERCC1-205ENST00000587888 PIK3C2AO00443 1686 aa20.19■□□□□ 0.82
ERCC1-205ENST00000587888 C11orf95C9JLR9 678 aaPredicted RBP20.18■□□□□ 0.82
ERCC1-205ENST00000587888 PARP4Q9UKK3 1724 aaKnown RBP20.17■□□□□ 0.82
ERCC1-205ENST00000587888 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.17■□□□□ 0.82
ERCC1-205ENST00000587888 WDR17Q8IZU2 1322 aa20.17■□□□□ 0.82
ERCC1-205ENST00000587888 TTC21AQ8NDW8 1320 aa20.17■□□□□ 0.82
ERCC1-205ENST00000587888 KTN1Q86UP2 1357 aaKnown RBP20.17■□□□□ 0.82
ERCC1-205ENST00000587888 COL18A1P39060 1754 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms