RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 NUTM2AQ8IVF1 878 aaPredicted RBP23.69■■□□□ 1.38
VAT1-204ENST00000587147 SSH2Q76I76 1423 aa23.67■■□□□ 1.38
VAT1-204ENST00000587147 MON2Q7Z3U7 1717 aa23.67■■□□□ 1.38
VAT1-204ENST00000587147 CRYBG1Q9Y4K1 1723 aa23.67■■□□□ 1.38
VAT1-204ENST00000587147 PAK3O75914 559 aaPredicted RBP23.65■■□□□ 1.38
VAT1-204ENST00000587147 ZNF772Q68DY9 489 aaPredicted RBP23.65■■□□□ 1.38
VAT1-204ENST00000587147 NRKQ7Z2Y5 1582 aa23.65■■□□□ 1.38
VAT1-204ENST00000587147 LMOD2Q6P5Q4 547 aa23.64■■□□□ 1.37
VAT1-204ENST00000587147 TTC21AQ8NDW8 1320 aa23.63■■□□□ 1.37
VAT1-204ENST00000587147 CD163L1Q9NR16 1453 aa23.63■■□□□ 1.37
VAT1-204ENST00000587147 TERF2IPQ9NYB0 399 aa23.63■■□□□ 1.37
VAT1-204ENST00000587147 RGS17Q9UGC6 210 aaPredicted RBP23.63■■□□□ 1.37
VAT1-204ENST00000587147 KTN1Q86UP2 1357 aaKnown RBP23.62■■□□□ 1.37
VAT1-204ENST00000587147 HDGFL2Q7Z4V5 671 aaPredicted RBP23.61■■□□□ 1.37
VAT1-204ENST00000587147 FNBP4Q8N3X1 1017 aaPredicted RBP23.61■■□□□ 1.37
VAT1-204ENST00000587147 PHRF1Q9P1Y6 1649 aaKnown RBP23.6■■□□□ 1.37
VAT1-204ENST00000587147 ADAMTS2O95450 1211 aa23.6■■□□□ 1.37
VAT1-204ENST00000587147 HAP1P54257 671 aaPredicted RBP23.6■■□□□ 1.37
VAT1-204ENST00000587147 ABTB2Q8N961 1025 aa23.6■■□□□ 1.37
VAT1-204ENST00000587147 EDC4Q6P2E9 1401 aaKnown RBP23.59■■□□□ 1.37
VAT1-204ENST00000587147 HSPA5P11021 654 aaKnown RBP23.59■■□□□ 1.37
VAT1-204ENST00000587147 NLRP13Q86W25 1043 aa23.59■■□□□ 1.37
VAT1-204ENST00000587147 TMC1Q8TDI8 760 aa23.59■■□□□ 1.37
VAT1-204ENST00000587147 NGLY1Q96IV0 654 aa23.59■■□□□ 1.37
VAT1-204ENST00000587147 C8orf37Q96NL8 207 aa23.59■■□□□ 1.37
VAT1-204ENST00000587147 USP19O94966 1318 aa23.59■■□□□ 1.37
VAT1-204ENST00000587147 AFF2P51816 1311 aa23.59■■□□□ 1.37
VAT1-204ENST00000587147 SLC12A5Q9H2X9 1139 aa23.58■■□□□ 1.37
VAT1-204ENST00000587147 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.58■■□□□ 1.37
VAT1-204ENST00000587147 NWD2Q9ULI1 1742 aa23.58■■□□□ 1.37
VAT1-204ENST00000587147 TTC21BQ7Z4L5 1316 aa23.58■■□□□ 1.36
VAT1-204ENST00000587147 PIK3C2AO00443 1686 aa23.57■■□□□ 1.36
VAT1-204ENST00000587147 USP54Q70EL1 1684 aa23.57■■□□□ 1.36
VAT1-204ENST00000587147 ANKRD36BQ8N2N9 1353 aa23.57■■□□□ 1.36
VAT1-204ENST00000587147 A0A1W2PP64 1363 aa23.56■■□□□ 1.36
VAT1-204ENST00000587147 SLIT2O94813 1529 aa23.56■■□□□ 1.36
VAT1-204ENST00000587147 CABLES1Q8TDN4 633 aa23.55■■□□□ 1.36
VAT1-204ENST00000587147 COL14A1Q05707 1796 aaKnown RBP23.55■■□□□ 1.36
VAT1-204ENST00000587147 SLIT3O75094 1523 aa23.54■■□□□ 1.36
VAT1-204ENST00000587147 MYOM1P52179 1685 aa23.54■■□□□ 1.36
VAT1-204ENST00000587147 CPDO75976 1380 aa23.52■■□□□ 1.36
VAT1-204ENST00000587147 USP31Q70CQ4 1352 aa23.52■■□□□ 1.36
VAT1-204ENST00000587147 PLCH1Q4KWH8 1693 aa23.52■■□□□ 1.36
VAT1-204ENST00000587147 BCL9LQ86UU0 1499 aa23.51■■□□□ 1.35
VAT1-204ENST00000587147 NLRP6P59044 892 aa23.51■■□□□ 1.35
VAT1-204ENST00000587147 POTEAQ6S8J7 498 aa23.51■■□□□ 1.35
VAT1-204ENST00000587147 USP21Q9UK80 565 aa23.51■■□□□ 1.35
VAT1-204ENST00000587147 CDK12Q9NYV4 1490 aaPredicted RBP23.49■■□□□ 1.35
VAT1-204ENST00000587147 TRPC5Q9UL62 973 aaPredicted RBP23.49■■□□□ 1.35
VAT1-204ENST00000587147 ATRNO75882 1429 aa23.49■■□□□ 1.35
VAT1-204ENST00000587147 GCP02774 474 aa23.48■■□□□ 1.35
VAT1-204ENST00000587147 KCNH5Q8NCM2 988 aa23.48■■□□□ 1.35
VAT1-204ENST00000587147 NUTM2GQ5VZR2 741 aa23.47■■□□□ 1.35
VAT1-204ENST00000587147 UNC5CLQ8IV45 518 aa23.47■■□□□ 1.35
VAT1-204ENST00000587147 FAM83GA6ND36 823 aa23.46■■□□□ 1.35
VAT1-204ENST00000587147 ILDR2Q71H61 639 aa23.46■■□□□ 1.35
VAT1-204ENST00000587147 QTRT2Q9H974 415 aaKnown RBP23.46■■□□□ 1.35
VAT1-204ENST00000587147 PRDM11Q9NQV5 511 aa23.46■■□□□ 1.35
VAT1-204ENST00000587147 KIAA0232Q92628 1395 aa23.45■■□□□ 1.34
VAT1-204ENST00000587147 RBM6P78332 1123 aaKnown RBP23.45■■□□□ 1.34
VAT1-204ENST00000587147 NRAPQ86VF7 1730 aa23.45■■□□□ 1.34
VAT1-204ENST00000587147 ABCC6O95255 1503 aa23.44■■□□□ 1.34
VAT1-204ENST00000587147 RXRBP28702 533 aa23.44■■□□□ 1.34
VAT1-204ENST00000587147 OVOS2A0A0J9YW53 1432 aa23.43■■□□□ 1.34
VAT1-204ENST00000587147 OVOS2Q6IE36 1432 aa23.43■■□□□ 1.34
VAT1-204ENST00000587147 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.43■■□□□ 1.34
VAT1-204ENST00000587147 LMO7Q8WWI1 1683 aa23.42■■□□□ 1.34
VAT1-204ENST00000587147 PLEKHG5O94827 1062 aa23.42■■□□□ 1.34
VAT1-204ENST00000587147 NFAT5O94916 1531 aa23.42■■□□□ 1.34
VAT1-204ENST00000587147 VPS72Q15906 364 aa23.4■■□□□ 1.34
VAT1-204ENST00000587147 AATKQ6ZMQ8 1374 aa23.4■■□□□ 1.34
VAT1-204ENST00000587147 NME9Q86XW9 330 aa23.39■■□□□ 1.33
VAT1-204ENST00000587147 BTG4Q9NY30 223 aa23.39■■□□□ 1.33
VAT1-204ENST00000587147 KIF20BQ96Q89 1820 aa23.38■■□□□ 1.33
VAT1-204ENST00000587147 ZC3H6P61129 1189 aaKnown RBP23.38■■□□□ 1.33
VAT1-204ENST00000587147 GJD4Q96KN9 370 aaPredicted RBP23.37■■□□□ 1.33
VAT1-204ENST00000587147 ARHGEF25Q86VW2 580 aa23.36■■□□□ 1.33
VAT1-204ENST00000587147 COG3Q96JB2 828 aa23.36■■□□□ 1.33
VAT1-204ENST00000587147 KIF7Q2M1P5 1343 aa23.35■■□□□ 1.33
VAT1-204ENST00000587147 NSD3Q9BZ95 1437 aa23.35■■□□□ 1.33
VAT1-204ENST00000587147 COL18A1P39060 1754 aa23.35■■□□□ 1.33
VAT1-204ENST00000587147 ZEB1P37275 1124 aaPredicted RBP23.35■■□□□ 1.33
VAT1-204ENST00000587147 C11orf95C9JLR9 678 aaPredicted RBP23.34■■□□□ 1.33
VAT1-204ENST00000587147 CARD14Q9BXL6 1004 aa23.34■■□□□ 1.33
VAT1-204ENST00000587147 GLI3P10071 1580 aa23.34■■□□□ 1.33
VAT1-204ENST00000587147 CAMTA1Q9Y6Y1 1673 aa23.34■■□□□ 1.33
VAT1-204ENST00000587147 FYB1O15117 783 aa23.33■■□□□ 1.33
VAT1-204ENST00000587147 CGNL1Q0VF96 1302 aa23.33■■□□□ 1.32
VAT1-204ENST00000587147 CHRNA2Q15822 529 aa23.32■■□□□ 1.32
VAT1-204ENST00000587147 POLR3GLQ9BT43 218 aa23.31■■□□□ 1.32
VAT1-204ENST00000587147 ZRANB1Q9UGI0 708 aa23.31■■□□□ 1.32
VAT1-204ENST00000587147 LTN1O94822 1766 aa23.31■■□□□ 1.32
VAT1-204ENST00000587147 COL5A2P05997 1499 aaPredicted RBP23.3■■□□□ 1.32
VAT1-204ENST00000587147 SOCS7O14512 581 aa23.3■■□□□ 1.32
VAT1-204ENST00000587147 RGS12O14924 1447 aa23.3■■□□□ 1.32
VAT1-204ENST00000587147 SPATA31A5Q5VU36 1347 aa23.3■■□□□ 1.32
VAT1-204ENST00000587147 SPATA31A7Q8IWB4 1347 aa23.3■■□□□ 1.32
VAT1-204ENST00000587147 NSD2O96028 1365 aa23.29■■□□□ 1.32
VAT1-204ENST00000587147 CCDC7Q96M83 1385 aa23.29■■□□□ 1.32
VAT1-204ENST00000587147 ONECUT3O60422 494 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms