RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 CAMKK2Q96RR4 588 aa21.19■□□□□ 0.98
CSNK1D-224ENST00000584672 APBA3O96018 575 aa21.18■□□□□ 0.98
CSNK1D-224ENST00000584672 HIRIP3Q9BW71 556 aaPredicted RBP21.18■□□□□ 0.98
CSNK1D-224ENST00000584672 PRDM11Q9NQV5 511 aa21.18■□□□□ 0.98
CSNK1D-224ENST00000584672 POGKQ9P215 609 aa21.18■□□□□ 0.98
CSNK1D-224ENST00000584672 DHX57Q6P158 1386 aaKnown RBP21.18■□□□□ 0.98
CSNK1D-224ENST00000584672 C14orf93Q9H972 538 aaKnown RBP21.17■□□□□ 0.98
CSNK1D-224ENST00000584672 ANKARQ7Z5J8 1434 aa21.17■□□□□ 0.98
CSNK1D-224ENST00000584672 NUP188Q5SRE5 1749 aa21.16■□□□□ 0.98
CSNK1D-224ENST00000584672 RREB1Q92766 1687 aa21.16■□□□□ 0.98
CSNK1D-224ENST00000584672 GPRASP1Q5JY77 1395 aa21.16■□□□□ 0.98
CSNK1D-224ENST00000584672 STRN4Q9NRL3 753 aa21.16■□□□□ 0.98
CSNK1D-224ENST00000584672 ACIN1Q9UKV3 1341 aaKnown RBP21.15■□□□□ 0.98
CSNK1D-224ENST00000584672 PAK3O75914 559 aaPredicted RBP21.15■□□□□ 0.98
CSNK1D-224ENST00000584672 CHRNA2Q15822 529 aa21.15■□□□□ 0.98
CSNK1D-224ENST00000584672 SPATA31A1Q5TZJ5 1347 aa21.13■□□□□ 0.97
CSNK1D-224ENST00000584672 PRR36Q9H6K5 1346 aa21.13■□□□□ 0.97
CSNK1D-224ENST00000584672 FAM196AQ6ZSG2 479 aa21.13■□□□□ 0.97
CSNK1D-224ENST00000584672 USP35Q9P2H5 1018 aa21.13■□□□□ 0.97
CSNK1D-224ENST00000584672 MINK1Q8N4C8 1332 aaPredicted RBP21.12■□□□□ 0.97
CSNK1D-224ENST00000584672 KIAA0232Q92628 1395 aa21.11■□□□□ 0.97
CSNK1D-224ENST00000584672 PPP1R1BQ9UD71 204 aaPredicted RBP21.11■□□□□ 0.97
CSNK1D-224ENST00000584672 DLC1Q96QB1 1528 aa21.1■□□□□ 0.97
CSNK1D-224ENST00000584672 NGDNQ8NEJ9 315 aaKnown RBP21.1■□□□□ 0.97
CSNK1D-224ENST00000584672 MPHOSPH9Q99550 1183 aa21.1■□□□□ 0.97
CSNK1D-224ENST00000584672 PHRF1Q9P1Y6 1649 aaKnown RBP21.1■□□□□ 0.97
CSNK1D-224ENST00000584672 TRAK1Q9UPV9 953 aa21.09■□□□□ 0.97
CSNK1D-224ENST00000584672 PARD3Q8TEW0 1356 aa21.09■□□□□ 0.97
CSNK1D-224ENST00000584672 CAMTA1Q9Y6Y1 1673 aa21.09■□□□□ 0.97
CSNK1D-224ENST00000584672 TULP4Q9NRJ4 1543 aa21.08■□□□□ 0.96
CSNK1D-224ENST00000584672 ZC3H6P61129 1189 aaKnown RBP21.07■□□□□ 0.96
CSNK1D-224ENST00000584672 NBPF8Q3BBV2 869 aa21.07■□□□□ 0.96
CSNK1D-224ENST00000584672 NBPF14Q5TI25 921 aa21.07■□□□□ 0.96
CSNK1D-224ENST00000584672 NUTM2GQ5VZR2 741 aa21.07■□□□□ 0.96
CSNK1D-224ENST00000584672 PDE3BQ13370 1112 aa21.06■□□□□ 0.96
CSNK1D-224ENST00000584672 SPON1Q9HCB6 807 aa21.05■□□□□ 0.96
CSNK1D-224ENST00000584672 ADGRB1O14514 1584 aa21.03■□□□□ 0.96
CSNK1D-224ENST00000584672 EIF3AQ14152 1382 aaKnown RBP21.03■□□□□ 0.96
CSNK1D-224ENST00000584672 DCAF8L1A6NGE4 600 aa21.03■□□□□ 0.96
CSNK1D-224ENST00000584672 WASLO00401 505 aaPredicted RBP21.02■□□□□ 0.96
CSNK1D-224ENST00000584672 KCNQ2O43526 872 aa21.02■□□□□ 0.96
CSNK1D-224ENST00000584672 EVA1CP58658 441 aa21.02■□□□□ 0.96
CSNK1D-224ENST00000584672 SSH2Q76I76 1423 aa21.02■□□□□ 0.96
CSNK1D-224ENST00000584672 ITSN1Q15811 1721 aa21.01■□□□□ 0.95
CSNK1D-224ENST00000584672 NINLQ9Y2I6 1382 aa20.99■□□□□ 0.95
CSNK1D-224ENST00000584672 LARP1Q6PKG0 1096 aaKnown RBP20.99■□□□□ 0.95
CSNK1D-224ENST00000584672 ATP7BP35670 1465 aa20.97■□□□□ 0.95
CSNK1D-224ENST00000584672 BARGINQ6ZT62 677 aa20.97■□□□□ 0.95
CSNK1D-224ENST00000584672 NRKQ7Z2Y5 1582 aa20.97■□□□□ 0.95
CSNK1D-224ENST00000584672 TCP11L2Q8N4U5 519 aa20.95■□□□□ 0.94
CSNK1D-224ENST00000584672 NUDT16Q96DE0 195 aaKnown RBP20.94■□□□□ 0.94
CSNK1D-224ENST00000584672 ANO8Q9HCE9 1232 aaPredicted RBP20.94■□□□□ 0.94
CSNK1D-224ENST00000584672 KDM2AQ9Y2K7 1162 aa20.94■□□□□ 0.94
CSNK1D-224ENST00000584672 LMO7Q8WWI1 1683 aa20.93■□□□□ 0.94
CSNK1D-224ENST00000584672 PARP4Q9UKK3 1724 aaKnown RBP20.93■□□□□ 0.94
CSNK1D-224ENST00000584672 ARHGEF28Q8N1W1 1705 aaKnown RBP20.92■□□□□ 0.94
CSNK1D-224ENST00000584672 CASZ1Q86V15 1759 aa20.92■□□□□ 0.94
CSNK1D-224ENST00000584672 PDGFDQ9GZP0 370 aaPredicted RBP20.92■□□□□ 0.94
CSNK1D-224ENST00000584672 MYOM1P52179 1685 aa20.92■□□□□ 0.94
CSNK1D-224ENST00000584672 SBF2Q86WG5 1849 aa20.9■□□□□ 0.94
CSNK1D-224ENST00000584672 ZBTB7CA1YPR0 619 aa20.9■□□□□ 0.94
CSNK1D-224ENST00000584672 ZBTB7AO95365 584 aa20.9■□□□□ 0.94
CSNK1D-224ENST00000584672 ACEP12821 1306 aa20.89■□□□□ 0.93
CSNK1D-224ENST00000584672 ZNF784Q8NCA9 323 aaPredicted RBP20.89■□□□□ 0.93
CSNK1D-224ENST00000584672 PEAK1Q9H792 1746 aa20.89■□□□□ 0.93
CSNK1D-224ENST00000584672 TOPAZ1Q8N9V7 1692 aa20.89■□□□□ 0.93
CSNK1D-224ENST00000584672 PTF1AQ7RTS3 328 aa20.88■□□□□ 0.93
CSNK1D-224ENST00000584672 OVOS2A0A0G2JMS6 1433 aa20.87■□□□□ 0.93
CSNK1D-224ENST00000584672 OVOS2A0A0J9YW53 1432 aa20.87■□□□□ 0.93
CSNK1D-224ENST00000584672 OVOS2Q6IE36 1432 aa20.87■□□□□ 0.93
CSNK1D-224ENST00000584672 RGPD3A6NKT7 1758 aaPredicted RBP20.87■□□□□ 0.93
CSNK1D-224ENST00000584672 RGPD4Q7Z3J3 1758 aa20.87■□□□□ 0.93
CSNK1D-224ENST00000584672 LRRC37A3O60309 1634 aa20.87■□□□□ 0.93
CSNK1D-224ENST00000584672 ABTB2Q8N961 1025 aa20.87■□□□□ 0.93
CSNK1D-224ENST00000584672 SENP3-EIF4A1A0A087X0R7 540 aa20.86■□□□□ 0.93
CSNK1D-224ENST00000584672 DCAF11Q8TEB1 546 aa20.86■□□□□ 0.93
CSNK1D-224ENST00000584672 CDK19Q9BWU1 502 aa20.86■□□□□ 0.93
CSNK1D-224ENST00000584672 BCL11BQ9C0K0 894 aaPredicted RBP20.86■□□□□ 0.93
CSNK1D-224ENST00000584672 ATF5Q9Y2D1 282 aaPredicted RBP20.86■□□□□ 0.93
CSNK1D-224ENST00000584672 COL5A2P05997 1499 aaPredicted RBP20.86■□□□□ 0.93
CSNK1D-224ENST00000584672 CPDO75976 1380 aa20.85■□□□□ 0.93
CSNK1D-224ENST00000584672 THRAP3Q9Y2W1 955 aaKnown RBP20.85■□□□□ 0.93
CSNK1D-224ENST00000584672 POLR3AO14802 1390 aaPredicted RBP20.85■□□□□ 0.93
CSNK1D-224ENST00000584672 USP19O94966 1318 aa20.83■□□□□ 0.93
CSNK1D-224ENST00000584672 CRB1P82279 1406 aa20.82■□□□□ 0.92
CSNK1D-224ENST00000584672 PLSCR1O15162 318 aa20.81■□□□□ 0.92
CSNK1D-224ENST00000584672 GCP02774 474 aa20.81■□□□□ 0.92
CSNK1D-224ENST00000584672 PTGER2P43116 358 aa20.81■□□□□ 0.92
CSNK1D-224ENST00000584672 DDB1Q16531 1140 aa20.8■□□□□ 0.92
CSNK1D-224ENST00000584672 WNK3Q9BYP7 1800 aa20.79■□□□□ 0.92
CSNK1D-224ENST00000584672 PROM2Q8N271 834 aa20.79■□□□□ 0.92
CSNK1D-224ENST00000584672 FHDC1Q9C0D6 1143 aaPredicted RBP20.79■□□□□ 0.92
CSNK1D-224ENST00000584672 CCDC61Q9Y6R9 512 aa20.79■□□□□ 0.92
CSNK1D-224ENST00000584672 AKAP12Q02952 1782 aa20.79■□□□□ 0.92
CSNK1D-224ENST00000584672 CHD4Q14839 1912 aa20.78■□□□□ 0.92
CSNK1D-224ENST00000584672 C11orf95C9JLR9 678 aaPredicted RBP20.78■□□□□ 0.92
CSNK1D-224ENST00000584672 NLRP13Q86W25 1043 aa20.78■□□□□ 0.92
CSNK1D-224ENST00000584672 TOM1L2Q6ZVM7 507 aa20.77■□□□□ 0.92
CSNK1D-224ENST00000584672 UTRNP46939 3433 aa20.76■□□□□ 0.91
CSNK1D-224ENST00000584672 PLEKHG3A1L390 1219 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms