RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 PRR20DP86480 221 aa8.1□□□□□ -1.11
VAPA-206ENST00000583475 PRR20BP86481 221 aa8.1□□□□□ -1.11
VAPA-206ENST00000583475 PRR20AP86496 221 aa8.1□□□□□ -1.11
VAPA-206ENST00000583475 NR6A1Q15406 480 aa8.1□□□□□ -1.11
VAPA-206ENST00000583475 TMEM132AQ24JP5 1023 aa8.1□□□□□ -1.11
VAPA-206ENST00000583475 RC3H1Q5TC82 1133 aaKnown RBP8.1□□□□□ -1.11
VAPA-206ENST00000583475 TNFRSF10AO00220 468 aa8.09□□□□□ -1.11
VAPA-206ENST00000583475 LAPTM4AQ15012 233 aa8.09□□□□□ -1.11
VAPA-206ENST00000583475 LINC01559Q495D7 138 aa8.09□□□□□ -1.11
VAPA-206ENST00000583475 BANK1Q8NDB2 785 aa8.09□□□□□ -1.11
VAPA-206ENST00000583475 EPS8L1Q8TE68 723 aa8.09□□□□□ -1.11
VAPA-206ENST00000583475 HMX1Q9NP08 348 aaPredicted RBP8.09□□□□□ -1.11
VAPA-206ENST00000583475 ZNF511Q8NB15 262 aa8.08□□□□□ -1.12
VAPA-206ENST00000583475 MRGPRX2Q96LB1 330 aa8.07□□□□□ -1.12
VAPA-206ENST00000583475 NRG2O14511 850 aaPredicted RBP8.06□□□□□ -1.12
VAPA-206ENST00000583475 SIAH2O43255 324 aa8.06□□□□□ -1.12
VAPA-206ENST00000583475 ARMC2Q8NEN0 867 aa8.06□□□□□ -1.12
VAPA-206ENST00000583475 FOXJ1Q92949 421 aa8.06□□□□□ -1.12
VAPA-206ENST00000583475 TRIM34Q9BYJ4 488 aa8.06□□□□□ -1.12
VAPA-206ENST00000583475 SNRKQ9NRH2 765 aa8.06□□□□□ -1.12
VAPA-206ENST00000583475 TOR4AQ9NXH8 423 aa8.06□□□□□ -1.12
VAPA-206ENST00000583475 GJD4Q96KN9 370 aaPredicted RBP8.05□□□□□ -1.12
VAPA-206ENST00000583475 EHBP1Q8NDI1 1231 aa8.04□□□□□ -1.12
VAPA-206ENST00000583475 FKBPLQ9UIM3 349 aa8.04□□□□□ -1.12
VAPA-206ENST00000583475 C4orf48Q5BLP8 95 aa8.03□□□□□ -1.12
VAPA-206ENST00000583475 Q6ZNB5 142 aa8.03□□□□□ -1.12
VAPA-206ENST00000583475 CYP4X1Q8N118 509 aa8.03□□□□□ -1.12
VAPA-206ENST00000583475 MTMR14Q8NCE2 650 aa8.03□□□□□ -1.12
VAPA-206ENST00000583475 SNIP1Q8TAD8 396 aaKnown RBP8.03□□□□□ -1.12
VAPA-206ENST00000583475 VARSP26640 1264 aaKnown RBP8.02□□□□□ -1.13
VAPA-206ENST00000583475 NBPF14Q5TI25 921 aa8.02□□□□□ -1.13
VAPA-206ENST00000583475 PDXDC2PQ6P474 469 aa8.02□□□□□ -1.13
VAPA-206ENST00000583475 SH3BP5LQ7L8J4 393 aa8.02□□□□□ -1.13
VAPA-206ENST00000583475 SH3RF1Q7Z6J0 888 aa8.02□□□□□ -1.13
VAPA-206ENST00000583475 GPKOWQ92917 476 aaPredicted RBP eCLIP8.02□□□□□ -1.13
VAPA-206ENST00000583475 SOCS7O14512 581 aa8.01□□□□□ -1.13
VAPA-206ENST00000583475 BPHLQ86WA6 291 aaPredicted RBP8.01□□□□□ -1.13
VAPA-206ENST00000583475 TTC24A2A3L6 582 aaPredicted RBP8□□□□□ -1.13
VAPA-206ENST00000583475 ZC3H4Q9UPT8 1303 aaKnown RBP8□□□□□ -1.13
VAPA-206ENST00000583475 J3QL48 77 aa7.99□□□□□ -1.13
VAPA-206ENST00000583475 SMPD1P17405 629 aa7.99□□□□□ -1.13
VAPA-206ENST00000583475 AGERQ15109 404 aa7.99□□□□□ -1.13
VAPA-206ENST00000583475 MPNDQ8N594 471 aa7.99□□□□□ -1.13
VAPA-206ENST00000583475 OCSTAMPQ9BR26 566 aa7.99□□□□□ -1.13
VAPA-206ENST00000583475 FAM187AA6NFU0 413 aa7.98□□□□□ -1.13
VAPA-206ENST00000583475 LCE2BO14633 110 aa7.98□□□□□ -1.13
VAPA-206ENST00000583475 DGAT1O75907 488 aa7.98□□□□□ -1.13
VAPA-206ENST00000583475 FAM174AQ8TBP5 190 aa7.98□□□□□ -1.13
VAPA-206ENST00000583475 C1QTNF2Q9BXJ5 285 aa7.98□□□□□ -1.13
VAPA-206ENST00000583475 GPR37L1O60883 481 aa7.97□□□□□ -1.13
VAPA-206ENST00000583475 ALDH1A1P00352 501 aa7.97□□□□□ -1.13
VAPA-206ENST00000583475 PNMA1Q8ND90 353 aa7.97□□□□□ -1.13
VAPA-206ENST00000583475 GPSM3Q9Y4H4 160 aa7.97□□□□□ -1.13
VAPA-206ENST00000583475 MAGEB6P1A0A0J9YX57 407 aa7.96□□□□□ -1.14
VAPA-206ENST00000583475 PTK2Q05397 1052 aa7.96□□□□□ -1.14
VAPA-206ENST00000583475 PKDCCQ504Y2 493 aa7.96□□□□□ -1.14
VAPA-206ENST00000583475 CDK15Q96Q40 435 aa7.96□□□□□ -1.14
VAPA-206ENST00000583475 ARHGAP9Q9BRR9 750 aa7.96□□□□□ -1.14
VAPA-206ENST00000583475 AVPP01185 164 aa7.95□□□□□ -1.14
VAPA-206ENST00000583475 MYT1Q01538 1121 aa7.95□□□□□ -1.14
VAPA-206ENST00000583475 ERFEQ4G0M1 354 aa7.95□□□□□ -1.14
VAPA-206ENST00000583475 TRAF7Q6Q0C0 670 aa7.95□□□□□ -1.14
VAPA-206ENST00000583475 TRMT44Q8IYL2 757 aaKnown RBP7.95□□□□□ -1.14
VAPA-206ENST00000583475 CARD14Q9BXL6 1004 aa7.95□□□□□ -1.14
VAPA-206ENST00000583475 TLL2Q9Y6L7 1015 aa7.95□□□□□ -1.14
VAPA-206ENST00000583475 GRM5P41594 1212 aa7.94□□□□□ -1.14
VAPA-206ENST00000583475 MCM6Q14566 821 aa7.94□□□□□ -1.14
VAPA-206ENST00000583475 ZBTB33Q86T24 672 aa7.94□□□□□ -1.14
VAPA-206ENST00000583475 HPS1Q92902 700 aa7.94□□□□□ -1.14
VAPA-206ENST00000583475 NDUFB9Q9Y6M9 179 aa7.94□□□□□ -1.14
VAPA-206ENST00000583475 APBB1O00213 710 aa7.93□□□□□ -1.14
VAPA-206ENST00000583475 ARID5BQ14865 1188 aa7.93□□□□□ -1.14
VAPA-206ENST00000583475 ADAM32Q8TC27 787 aa7.93□□□□□ -1.14
VAPA-206ENST00000583475 TBC1D2BQ9UPU7 963 aa7.93□□□□□ -1.14
VAPA-206ENST00000583475 ZBBXA8MT70 800 aa7.92□□□□□ -1.14
VAPA-206ENST00000583475 FBXO45P0C2W1 286 aa7.92□□□□□ -1.14
VAPA-206ENST00000583475 WASF2Q9Y6W5 498 aa7.92□□□□□ -1.14
VAPA-206ENST00000583475 ADH1CP00326 375 aa7.91□□□□□ -1.14
VAPA-206ENST00000583475 MAP4K5Q9Y4K4 846 aa7.91□□□□□ -1.14
VAPA-206ENST00000583475 GDPD2Q9HCC8 539 aa7.9□□□□□ -1.14
VAPA-206ENST00000583475 AAASQ9NRG9 546 aa7.9□□□□□ -1.14
VAPA-206ENST00000583475 ST8SIA5O15466 376 aa7.89□□□□□ -1.15
VAPA-206ENST00000583475 SMCPP49901 116 aaPredicted RBP7.89□□□□□ -1.15
VAPA-206ENST00000583475 FLIIQ13045 1269 aa7.89□□□□□ -1.15
VAPA-206ENST00000583475 NR5A1Q13285 461 aa7.89□□□□□ -1.15
VAPA-206ENST00000583475 IRF5Q13568 498 aa7.89□□□□□ -1.15
VAPA-206ENST00000583475 VASH1Q7L8A9 365 aaPredicted RBP7.89□□□□□ -1.15
VAPA-206ENST00000583475 CRIPAKQ8N1N5 446 aa7.89□□□□□ -1.15
VAPA-206ENST00000583475 PRM3Q9NNZ6 103 aa7.89□□□□□ -1.15
VAPA-206ENST00000583475 NR3C2P08235 984 aa7.88□□□□□ -1.15
VAPA-206ENST00000583475 NR1H3Q13133 447 aa7.88□□□□□ -1.15
VAPA-206ENST00000583475 NNTQ13423 1086 aa7.88□□□□□ -1.15
VAPA-206ENST00000583475 CTC1Q2NKJ3 1217 aa7.88□□□□□ -1.15
VAPA-206ENST00000583475 KLF16Q9BXK1 252 aaPredicted RBP7.88□□□□□ -1.15
VAPA-206ENST00000583475 COG6Q9Y2V7 657 aa7.88□□□□□ -1.15
VAPA-206ENST00000583475 AXIN1O15169 862 aa7.87□□□□□ -1.15
VAPA-206ENST00000583475 DZIP3Q86Y13 1208 aaKnown RBP7.87□□□□□ -1.15
VAPA-206ENST00000583475 SLC10A4Q96EP9 437 aa7.87□□□□□ -1.15
VAPA-206ENST00000583475 KCTD15Q96SI1 283 aaPredicted RBP7.87□□□□□ -1.15
VAPA-206ENST00000583475 DACH1Q9UI36 760 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms