RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 NGDNQ8NEJ9 315 aaKnown RBP14.15□□□□□ -0.14
CDK5RAP3-227ENST00000583352 NRAPQ86VF7 1730 aa14.15□□□□□ -0.14
CDK5RAP3-227ENST00000583352 COL14A1Q05707 1796 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-227ENST00000583352 BTG4Q9NY30 223 aa14.14□□□□□ -0.15
CDK5RAP3-227ENST00000583352 PAK3O75914 559 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-227ENST00000583352 FAM98CQ17RN3 349 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-227ENST00000583352 ITSN1Q15811 1721 aa14.12□□□□□ -0.15
CDK5RAP3-227ENST00000583352 ARHGEF28Q8N1W1 1705 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-227ENST00000583352 PRDM11Q9NQV5 511 aa14.11□□□□□ -0.15
CDK5RAP3-227ENST00000583352 BAG6P46379 1132 aa14.1□□□□□ -0.15
CDK5RAP3-227ENST00000583352 NUDT16Q96DE0 195 aaKnown RBP14.1□□□□□ -0.15
CDK5RAP3-227ENST00000583352 ATP7BP35670 1465 aa14.1□□□□□ -0.15
CDK5RAP3-227ENST00000583352 CRYBG1Q9Y4K1 1723 aa14.1□□□□□ -0.15
CDK5RAP3-227ENST00000583352 SPATA31A5Q5VU36 1347 aa14.09□□□□□ -0.15
CDK5RAP3-227ENST00000583352 SPATA31A7Q8IWB4 1347 aa14.09□□□□□ -0.15
CDK5RAP3-227ENST00000583352 CDK19Q9BWU1 502 aa14.07□□□□□ -0.16
CDK5RAP3-227ENST00000583352 RGPD1P0DJD0 1748 aa14.06□□□□□ -0.16
CDK5RAP3-227ENST00000583352 KIAA0232Q92628 1395 aa14.06□□□□□ -0.16
CDK5RAP3-227ENST00000583352 THSD7AQ9UPZ6 1657 aa14.05□□□□□ -0.16
CDK5RAP3-227ENST00000583352 KIAA1210Q9ULL0 1709 aa14.05□□□□□ -0.16
CDK5RAP3-227ENST00000583352 POLR3AO14802 1390 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-227ENST00000583352 PHRF1Q9P1Y6 1649 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-227ENST00000583352 CHRNA2Q15822 529 aa14.04□□□□□ -0.16
CDK5RAP3-227ENST00000583352 FAM182BQ5T319 152 aa14.04□□□□□ -0.16
CDK5RAP3-227ENST00000583352 NUTM2GQ5VZR2 741 aa14.04□□□□□ -0.16
CDK5RAP3-227ENST00000583352 STRN4Q9NRL3 753 aa14.04□□□□□ -0.16
CDK5RAP3-227ENST00000583352 CCDC61Q9Y6R9 512 aa14.04□□□□□ -0.16
CDK5RAP3-227ENST00000583352 ACEP12821 1306 aa14.04□□□□□ -0.16
CDK5RAP3-227ENST00000583352 LRP5O75197 1615 aa14.04□□□□□ -0.16
CDK5RAP3-227ENST00000583352 TOPAZ1Q8N9V7 1692 aa14.04□□□□□ -0.16
CDK5RAP3-227ENST00000583352 PSDA5PKW4 1024 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-227ENST00000583352 ZC3H6P61129 1189 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-227ENST00000583352 EN1Q05925 392 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-227ENST00000583352 NBPF8Q3BBV2 869 aa14.03□□□□□ -0.16
CDK5RAP3-227ENST00000583352 SPATA31A1Q5TZJ5 1347 aa14.03□□□□□ -0.16
CDK5RAP3-227ENST00000583352 PLEKHG3A1L390 1219 aa14.02□□□□□ -0.17
CDK5RAP3-227ENST00000583352 DISP2A7MBM2 1401 aa14.01□□□□□ -0.17
CDK5RAP3-227ENST00000583352 EVA1CP58658 441 aa14.01□□□□□ -0.17
CDK5RAP3-227ENST00000583352 ABTB2Q8N961 1025 aa14.01□□□□□ -0.17
CDK5RAP3-227ENST00000583352 ZEB1P37275 1124 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-227ENST00000583352 NBPF1Q3BBV0 1214 aa14□□□□□ -0.17
CDK5RAP3-227ENST00000583352 FAM196AQ6ZSG2 479 aa14□□□□□ -0.17
CDK5RAP3-227ENST00000583352 NRKQ7Z2Y5 1582 aa14□□□□□ -0.17
CDK5RAP3-227ENST00000583352 SSH2Q76I76 1423 aa13.99□□□□□ -0.17
CDK5RAP3-227ENST00000583352 TNS1Q9HBL0 1735 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-227ENST00000583352 CENPJQ9HC77 1338 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-227ENST00000583352 SRPK2P78362 688 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-227ENST00000583352 USP35Q9P2H5 1018 aa13.99□□□□□ -0.17
CDK5RAP3-227ENST00000583352 CPDO75976 1380 aa13.98□□□□□ -0.17
CDK5RAP3-227ENST00000583352 EP400Q96L91 3159 aa13.98□□□□□ -0.17
CDK5RAP3-227ENST00000583352 USP19O94966 1318 aa13.98□□□□□ -0.17
CDK5RAP3-227ENST00000583352 BARGINQ6ZT62 677 aa13.98□□□□□ -0.17
CDK5RAP3-227ENST00000583352 NLRP13Q86W25 1043 aa13.98□□□□□ -0.17
CDK5RAP3-227ENST00000583352 PPIP5K1Q6PFW1 1433 aa13.98□□□□□ -0.17
CDK5RAP3-227ENST00000583352 TRIM37O94972 964 aa13.97□□□□□ -0.17
CDK5RAP3-227ENST00000583352 PDE3BQ13370 1112 aa13.97□□□□□ -0.17
CDK5RAP3-227ENST00000583352 EZH2Q15910 746 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-227ENST00000583352 BRD4O60885 1362 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP3-227ENST00000583352 CAMTA1Q9Y6Y1 1673 aa13.96□□□□□ -0.17
CDK5RAP3-227ENST00000583352 R3HDM1Q15032 1099 aaKnown RBP13.96□□□□□ -0.17
CDK5RAP3-227ENST00000583352 LARP1Q6PKG0 1096 aaKnown RBP13.96□□□□□ -0.17
CDK5RAP3-227ENST00000583352 TCP11L2Q8N4U5 519 aa13.96□□□□□ -0.17
CDK5RAP3-227ENST00000583352 CABP2Q9NPB3 220 aa13.96□□□□□ -0.17
CDK5RAP3-227ENST00000583352 LMO7Q8WWI1 1683 aa13.95□□□□□ -0.18
CDK5RAP3-227ENST00000583352 APBA3O96018 575 aa13.95□□□□□ -0.18
CDK5RAP3-227ENST00000583352 GCP02774 474 aa13.95□□□□□ -0.18
CDK5RAP3-227ENST00000583352 CAMKK2Q96RR4 588 aa13.95□□□□□ -0.18
CDK5RAP3-227ENST00000583352 PARD3Q8TEW0 1356 aa13.95□□□□□ -0.18
CDK5RAP3-227ENST00000583352 THRAP3Q9Y2W1 955 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-227ENST00000583352 QRICH2Q9H0J4 1663 aa13.94□□□□□ -0.18
CDK5RAP3-227ENST00000583352 ZBTB7CA1YPR0 619 aa13.92□□□□□ -0.18
CDK5RAP3-227ENST00000583352 NLRP6P59044 892 aa13.92□□□□□ -0.18
CDK5RAP3-227ENST00000583352 CCER1Q8TC90 406 aaPredicted RBP13.92□□□□□ -0.18
CDK5RAP3-227ENST00000583352 CABP1Q9NZU7 370 aa13.92□□□□□ -0.18
CDK5RAP3-227ENST00000583352 COL5A2P05997 1499 aaPredicted RBP13.92□□□□□ -0.18
CDK5RAP3-227ENST00000583352 USP6P35125 1406 aa13.91□□□□□ -0.18
CDK5RAP3-227ENST00000583352 CRB1P82279 1406 aa13.9□□□□□ -0.18
CDK5RAP3-227ENST00000583352 C11orf95C9JLR9 678 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP3-227ENST00000583352 L3MBTL2Q969R5 705 aa13.9□□□□□ -0.18
CDK5RAP3-227ENST00000583352 PARP4Q9UKK3 1724 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-227ENST00000583352 SLIT3O75094 1523 aa13.9□□□□□ -0.19
CDK5RAP3-227ENST00000583352 EVC2Q86UK5 1308 aa13.9□□□□□ -0.19
CDK5RAP3-227ENST00000583352 RREB1Q92766 1687 aa13.89□□□□□ -0.19
CDK5RAP3-227ENST00000583352 AATKQ6ZMQ8 1374 aa13.89□□□□□ -0.19
CDK5RAP3-227ENST00000583352 NBPF14Q5TI25 921 aa13.89□□□□□ -0.19
CDK5RAP3-227ENST00000583352 NUP188Q5SRE5 1749 aa13.87□□□□□ -0.19
CDK5RAP3-227ENST00000583352 TOM1L2Q6ZVM7 507 aa13.87□□□□□ -0.19
CDK5RAP3-227ENST00000583352 OVOS2A0A0G2JMS6 1433 aa13.87□□□□□ -0.19
CDK5RAP3-227ENST00000583352 OVOS2A0A0J9YW53 1432 aa13.87□□□□□ -0.19
CDK5RAP3-227ENST00000583352 OVOS2Q6IE36 1432 aa13.87□□□□□ -0.19
CDK5RAP3-227ENST00000583352 TRPM1Q7Z4N2 1603 aa13.86□□□□□ -0.19
CDK5RAP3-227ENST00000583352 PIK3C2AO00443 1686 aa13.86□□□□□ -0.19
CDK5RAP3-227ENST00000583352 ZNF692Q9BU19 519 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-227ENST00000583352 ROCK2O75116 1388 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-227ENST00000583352 DDB1Q16531 1140 aa13.85□□□□□ -0.19
CDK5RAP3-227ENST00000583352 COL18A1P39060 1754 aa13.84□□□□□ -0.19
CDK5RAP3-227ENST00000583352 LRRC37A3O60309 1634 aa13.84□□□□□ -0.19
CDK5RAP3-227ENST00000583352 KCNH5Q8NCM2 988 aa13.84□□□□□ -0.19
CDK5RAP3-227ENST00000583352 SIN3AQ96ST3 1273 aa13.84□□□□□ -0.19
CDK5RAP3-227ENST00000583352 TTC21BQ7Z4L5 1316 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms