RNA–Protein interactions for RNA: ENST00000582818.5

ERBB2-213, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-213ENST00000582818 KRT27Q7Z3Y8 459 aa20.36■□□□□ 0.85
ERBB2-213ENST00000582818 NGDNQ8NEJ9 315 aaKnown RBP20.36■□□□□ 0.85
ERBB2-213ENST00000582818 CCDC9Q9Y3X0 531 aaKnown RBP20.36■□□□□ 0.85
ERBB2-213ENST00000582818 CRYBG1Q9Y4K1 1723 aa20.36■□□□□ 0.85
ERBB2-213ENST00000582818 ATP7BP35670 1465 aa20.33■□□□□ 0.85
ERBB2-213ENST00000582818 BTG4Q9NY30 223 aa20.33■□□□□ 0.85
ERBB2-213ENST00000582818 NUDT16Q96DE0 195 aaKnown RBP20.32■□□□□ 0.84
ERBB2-213ENST00000582818 POLR3AO14802 1390 aaPredicted RBP20.3■□□□□ 0.84
ERBB2-213ENST00000582818 SPATA31A5Q5VU36 1347 aa20.29■□□□□ 0.84
ERBB2-213ENST00000582818 SPATA31A7Q8IWB4 1347 aa20.29■□□□□ 0.84
ERBB2-213ENST00000582818 CCDC61Q9Y6R9 512 aa20.29■□□□□ 0.84
ERBB2-213ENST00000582818 TOPAZ1Q8N9V7 1692 aa20.29■□□□□ 0.84
ERBB2-213ENST00000582818 PAK3O75914 559 aaPredicted RBP20.28■□□□□ 0.84
ERBB2-213ENST00000582818 PCGF6Q9BYE7 350 aa20.28■□□□□ 0.84
ERBB2-213ENST00000582818 PRDM11Q9NQV5 511 aa20.28■□□□□ 0.84
ERBB2-213ENST00000582818 PLEKHG3A1L390 1219 aa20.27■□□□□ 0.84
ERBB2-213ENST00000582818 PLEKHG5O94827 1062 aa20.27■□□□□ 0.84
ERBB2-213ENST00000582818 FAM98CQ17RN3 349 aaKnown RBP20.27■□□□□ 0.84
ERBB2-213ENST00000582818 CDK19Q9BWU1 502 aa20.27■□□□□ 0.84
ERBB2-213ENST00000582818 BAG6P46379 1132 aa20.26■□□□□ 0.83
ERBB2-213ENST00000582818 DEFB132Q7Z7B7 95 aa20.26■□□□□ 0.83
ERBB2-213ENST00000582818 RGPD1P0DJD0 1748 aa20.26■□□□□ 0.83
ERBB2-213ENST00000582818 THSD7AQ9UPZ6 1657 aa20.26■□□□□ 0.83
ERBB2-213ENST00000582818 BRD4O60885 1362 aaPredicted RBP20.25■□□□□ 0.83
ERBB2-213ENST00000582818 PHRF1Q9P1Y6 1649 aaKnown RBP20.24■□□□□ 0.83
ERBB2-213ENST00000582818 A0A0G2JS52 829 aa20.24■□□□□ 0.83
ERBB2-213ENST00000582818 MYT1Q01538 1121 aa20.24■□□□□ 0.83
ERBB2-213ENST00000582818 DISP2A7MBM2 1401 aa20.23■□□□□ 0.83
ERBB2-213ENST00000582818 NBPF8Q3BBV2 869 aa20.23■□□□□ 0.83
ERBB2-213ENST00000582818 KIAA0232Q92628 1395 aa20.22■□□□□ 0.83
ERBB2-213ENST00000582818 ACEP12821 1306 aa20.22■□□□□ 0.83
ERBB2-213ENST00000582818 SPATA31A1Q5TZJ5 1347 aa20.22■□□□□ 0.83
ERBB2-213ENST00000582818 LRP5O75197 1615 aa20.21■□□□□ 0.83
ERBB2-213ENST00000582818 CPDO75976 1380 aa20.21■□□□□ 0.83
ERBB2-213ENST00000582818 BARGINQ6ZT62 677 aa20.18■□□□□ 0.82
ERBB2-213ENST00000582818 USP19O94966 1318 aa20.18■□□□□ 0.82
ERBB2-213ENST00000582818 FAM196AQ6ZSG2 479 aa20.17■□□□□ 0.82
ERBB2-213ENST00000582818 CENPJQ9HC77 1338 aaPredicted RBP20.17■□□□□ 0.82
ERBB2-213ENST00000582818 NBPF1Q3BBV0 1214 aa20.16■□□□□ 0.82
ERBB2-213ENST00000582818 NLRP13Q86W25 1043 aa20.16■□□□□ 0.82
ERBB2-213ENST00000582818 ABTB2Q8N961 1025 aa20.16■□□□□ 0.82
ERBB2-213ENST00000582818 NRKQ7Z2Y5 1582 aa20.16■□□□□ 0.82
ERBB2-213ENST00000582818 TNS1Q9HBL0 1735 aaKnown RBP20.15■□□□□ 0.82
ERBB2-213ENST00000582818 LMO7Q8WWI1 1683 aa20.14■□□□□ 0.81
ERBB2-213ENST00000582818 SSH2Q76I76 1423 aa20.14■□□□□ 0.81
ERBB2-213ENST00000582818 PARD3Q8TEW0 1356 aa20.14■□□□□ 0.81
ERBB2-213ENST00000582818 EVA1CP58658 441 aa20.14■□□□□ 0.81
ERBB2-213ENST00000582818 ZC3H6P61129 1189 aaKnown RBP20.14■□□□□ 0.81
ERBB2-213ENST00000582818 THRAP3Q9Y2W1 955 aaKnown RBP20.14■□□□□ 0.81
ERBB2-213ENST00000582818 PPIP5K1Q6PFW1 1433 aa20.13■□□□□ 0.81
ERBB2-213ENST00000582818 C11orf95C9JLR9 678 aaPredicted RBP20.13■□□□□ 0.81
ERBB2-213ENST00000582818 SRPK2P78362 688 aaKnown RBP20.13■□□□□ 0.81
ERBB2-213ENST00000582818 CHRNA2Q15822 529 aa20.13■□□□□ 0.81
ERBB2-213ENST00000582818 QRICH2Q9H0J4 1663 aa20.13■□□□□ 0.81
ERBB2-213ENST00000582818 STRN4Q9NRL3 753 aa20.12■□□□□ 0.81
ERBB2-213ENST00000582818 CAMTA1Q9Y6Y1 1673 aa20.12■□□□□ 0.81
ERBB2-213ENST00000582818 GCP02774 474 aa20.11■□□□□ 0.81
ERBB2-213ENST00000582818 EN1Q05925 392 aaPredicted RBP20.1■□□□□ 0.81
ERBB2-213ENST00000582818 NUTM2GQ5VZR2 741 aa20.1■□□□□ 0.81
ERBB2-213ENST00000582818 TCP11L2Q8N4U5 519 aa20.1■□□□□ 0.81
ERBB2-213ENST00000582818 PDE3BQ13370 1112 aa20.08■□□□□ 0.81
ERBB2-213ENST00000582818 USP6P35125 1406 aa20.08■□□□□ 0.8
ERBB2-213ENST00000582818 EVC2Q86UK5 1308 aa20.07■□□□□ 0.8
ERBB2-213ENST00000582818 CLSPNQ9HAW4 1339 aa20.07■□□□□ 0.8
ERBB2-213ENST00000582818 FAM182BQ5T319 152 aa20.07■□□□□ 0.8
ERBB2-213ENST00000582818 CAMKK2Q96RR4 588 aa20.07■□□□□ 0.8
ERBB2-213ENST00000582818 PARP4Q9UKK3 1724 aaKnown RBP20.07■□□□□ 0.8
ERBB2-213ENST00000582818 LARP1Q6PKG0 1096 aaKnown RBP20.06■□□□□ 0.8
ERBB2-213ENST00000582818 CABP2Q9NPB3 220 aa20.06■□□□□ 0.8
ERBB2-213ENST00000582818 AATKQ6ZMQ8 1374 aa20.06■□□□□ 0.8
ERBB2-213ENST00000582818 COL5A2P05997 1499 aaPredicted RBP20.05■□□□□ 0.8
ERBB2-213ENST00000582818 TRIM37O94972 964 aa20.05■□□□□ 0.8
ERBB2-213ENST00000582818 L3MBTL2Q969R5 705 aa20.05■□□□□ 0.8
ERBB2-213ENST00000582818 ZNF692Q9BU19 519 aaPredicted RBP20.05■□□□□ 0.8
ERBB2-213ENST00000582818 SLIT3O75094 1523 aa20.05■□□□□ 0.8
ERBB2-213ENST00000582818 TRPM1Q7Z4N2 1603 aa20.05■□□□□ 0.8
ERBB2-213ENST00000582818 PSDA5PKW4 1024 aaPredicted RBP20.04■□□□□ 0.8
ERBB2-213ENST00000582818 CABP1Q9NZU7 370 aa20.04■□□□□ 0.8
ERBB2-213ENST00000582818 USP35Q9P2H5 1018 aa20.04■□□□□ 0.8
ERBB2-213ENST00000582818 CRB1P82279 1406 aa20.03■□□□□ 0.8
ERBB2-213ENST00000582818 NLRP6P59044 892 aa20.03■□□□□ 0.8
ERBB2-213ENST00000582818 SIN3AQ96ST3 1273 aa20.03■□□□□ 0.8
ERBB2-213ENST00000582818 APBA3O96018 575 aa20.02■□□□□ 0.8
ERBB2-213ENST00000582818 NEUROD1Q13562 356 aa20.02■□□□□ 0.8
ERBB2-213ENST00000582818 EZH2Q15910 746 aaKnown RBP20.02■□□□□ 0.8
ERBB2-213ENST00000582818 RREB1Q92766 1687 aa20.02■□□□□ 0.8
ERBB2-213ENST00000582818 R3HDM1Q15032 1099 aaKnown RBP20■□□□□ 0.79
ERBB2-213ENST00000582818 COL18A1P39060 1754 aa20■□□□□ 0.79
ERBB2-213ENST00000582818 AKAP12Q02952 1782 aa20■□□□□ 0.79
ERBB2-213ENST00000582818 PIK3C2AO00443 1686 aa20■□□□□ 0.79
ERBB2-213ENST00000582818 RGPD3A6NKT7 1758 aaPredicted RBP19.99■□□□□ 0.79
ERBB2-213ENST00000582818 RGPD4Q7Z3J3 1758 aa19.99■□□□□ 0.79
ERBB2-213ENST00000582818 KCNH5Q8NCM2 988 aa19.99■□□□□ 0.79
ERBB2-213ENST00000582818 CDCA7Q9BWT1 371 aaPredicted RBP19.99■□□□□ 0.79
ERBB2-213ENST00000582818 TTC21AQ8NDW8 1320 aa19.99■□□□□ 0.79
ERBB2-213ENST00000582818 ROCK2O75116 1388 aaKnown RBP19.98■□□□□ 0.79
ERBB2-213ENST00000582818 SBNO2Q9Y2G9 1366 aa19.97■□□□□ 0.79
ERBB2-213ENST00000582818 OVOS2A0A0G2JMS6 1433 aa19.97■□□□□ 0.79
ERBB2-213ENST00000582818 OVOS2A0A0J9YW53 1432 aa19.97■□□□□ 0.79
ERBB2-213ENST00000582818 OVOS2Q6IE36 1432 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms