RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 HAP1P54257 671 aaPredicted RBP29.03■■■□□ 2.24
PPP4R1-221ENST00000582240 NGLY1Q96IV0 654 aa29.03■■■□□ 2.24
PPP4R1-221ENST00000582240 AFF2P51816 1311 aa29.02■■■□□ 2.24
PPP4R1-221ENST00000582240 TMF1P82094 1093 aa29.01■■■□□ 2.23
PPP4R1-221ENST00000582240 EIF4G2P78344 907 aaKnown RBP eCLIP28.99■■■□□ 2.23
PPP4R1-221ENST00000582240 ABTB2Q8N961 1025 aa28.98■■■□□ 2.23
PPP4R1-221ENST00000582240 ALS2Q96Q42 1657 aa28.98■■■□□ 2.23
PPP4R1-221ENST00000582240 USP6P35125 1406 aa28.97■■■□□ 2.23
PPP4R1-221ENST00000582240 PUS7Q96PZ0 661 aaKnown RBP28.96■■■□□ 2.23
PPP4R1-221ENST00000582240 ZNF692Q9BU19 519 aaPredicted RBP28.95■■■□□ 2.22
PPP4R1-221ENST00000582240 SLC24A1O60721 1099 aa28.94■■■□□ 2.22
PPP4R1-221ENST00000582240 KTN1Q86UP2 1357 aaKnown RBP28.93■■■□□ 2.22
PPP4R1-221ENST00000582240 CPSF1Q10570 1443 aaKnown RBP28.93■■■□□ 2.22
PPP4R1-221ENST00000582240 TTC21BQ7Z4L5 1316 aa28.93■■■□□ 2.22
PPP4R1-221ENST00000582240 ZNF772Q68DY9 489 aaPredicted RBP28.92■■■□□ 2.22
PPP4R1-221ENST00000582240 CD163L1Q9NR16 1453 aa28.91■■■□□ 2.22
PPP4R1-221ENST00000582240 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.91■■■□□ 2.221e-7■■□□□ 14.3
PPP4R1-221ENST00000582240 POLR3GLQ9BT43 218 aa28.91■■■□□ 2.22
PPP4R1-221ENST00000582240 SSH2Q76I76 1423 aa28.91■■■□□ 2.22
PPP4R1-221ENST00000582240 HDGFL2Q7Z4V5 671 aaPredicted RBP28.9■■■□□ 2.22
PPP4R1-221ENST00000582240 USP21Q9UK80 565 aa28.9■■■□□ 2.22
PPP4R1-221ENST00000582240 NLRP6P59044 892 aa28.89■■■□□ 2.22
PPP4R1-221ENST00000582240 FAM83GA6ND36 823 aa28.88■■■□□ 2.21
PPP4R1-221ENST00000582240 FNBP4Q8N3X1 1017 aaPredicted RBP28.88■■■□□ 2.21
PPP4R1-221ENST00000582240 QTRT2Q9H974 415 aaKnown RBP28.88■■■□□ 2.21
PPP4R1-221ENST00000582240 ZRANB1Q9UGI0 708 aa28.88■■■□□ 2.21
PPP4R1-221ENST00000582240 ZC3H6P61129 1189 aaKnown RBP28.87■■■□□ 2.21
PPP4R1-221ENST00000582240 NLRP13Q86W25 1043 aa28.87■■■□□ 2.21
PPP4R1-221ENST00000582240 TERF2IPQ9NYB0 399 aa28.87■■■□□ 2.21
PPP4R1-221ENST00000582240 A0A1W2PP64 1363 aa28.87■■■□□ 2.21
PPP4R1-221ENST00000582240 BRD4O60885 1362 aaPredicted RBP28.87■■■□□ 2.21
PPP4R1-221ENST00000582240 ABCA3Q99758 1704 aa28.86■■■□□ 2.21
PPP4R1-221ENST00000582240 AKAP12Q02952 1782 aa28.86■■■□□ 2.21
PPP4R1-221ENST00000582240 CDCA8Q53HL2 280 aa28.85■■■□□ 2.21
PPP4R1-221ENST00000582240 C11orf95C9JLR9 678 aaPredicted RBP28.83■■■□□ 2.21
PPP4R1-221ENST00000582240 CHRNA2Q15822 529 aa28.83■■■□□ 2.21
PPP4R1-221ENST00000582240 NME9Q86XW9 330 aa28.83■■■□□ 2.21
PPP4R1-221ENST00000582240 USP19O94966 1318 aa28.82■■■□□ 2.2
PPP4R1-221ENST00000582240 MARF1Q9Y4F3 1742 aaKnown RBP28.82■■■□□ 2.2
PPP4R1-221ENST00000582240 CRYBG1Q9Y4K1 1723 aa28.81■■■□□ 2.2
PPP4R1-221ENST00000582240 BCL9LQ86UU0 1499 aa28.81■■■□□ 2.2
PPP4R1-221ENST00000582240 TTC21AQ8NDW8 1320 aa28.81■■■□□ 2.2
PPP4R1-221ENST00000582240 KIAA0232Q92628 1395 aa28.8■■■□□ 2.2
PPP4R1-221ENST00000582240 ZBTB7CA1YPR0 619 aa28.8■■■□□ 2.2
PPP4R1-221ENST00000582240 SOX12O15370 315 aa28.8■■■□□ 2.2
PPP4R1-221ENST00000582240 GCP02774 474 aa28.8■■■□□ 2.2
PPP4R1-221ENST00000582240 PRDM11Q9NQV5 511 aa28.8■■■□□ 2.2
PPP4R1-221ENST00000582240 RXRBP28702 533 aa28.79■■■□□ 2.2
PPP4R1-221ENST00000582240 NINLQ9Y2I6 1382 aa28.78■■■□□ 2.2
PPP4R1-221ENST00000582240 MON2Q7Z3U7 1717 aa28.78■■■□□ 2.2
PPP4R1-221ENST00000582240 PIK3C2AO00443 1686 aa28.78■■■□□ 2.2
PPP4R1-221ENST00000582240 UNC5CLQ8IV45 518 aa28.78■■■□□ 2.2
PPP4R1-221ENST00000582240 SLIT2O94813 1529 aa28.78■■■□□ 2.2
PPP4R1-221ENST00000582240 PHRF1Q9P1Y6 1649 aaKnown RBP28.77■■■□□ 2.2
PPP4R1-221ENST00000582240 NRKQ7Z2Y5 1582 aa28.77■■■□□ 2.2
PPP4R1-221ENST00000582240 BTG4Q9NY30 223 aa28.77■■■□□ 2.2
PPP4R1-221ENST00000582240 TRPC5Q9UL62 973 aaPredicted RBP28.77■■■□□ 2.2
PPP4R1-221ENST00000582240 EDC4Q6P2E9 1401 aaKnown RBP28.76■■■□□ 2.19
PPP4R1-221ENST00000582240 ANKRD36BQ8N2N9 1353 aa28.75■■■□□ 2.19
PPP4R1-221ENST00000582240 ATRNO75882 1429 aa28.74■■■□□ 2.19
PPP4R1-221ENST00000582240 RBM6P78332 1123 aaKnown RBP28.73■■■□□ 2.19
PPP4R1-221ENST00000582240 CARD14Q9BXL6 1004 aa28.72■■■□□ 2.19
PPP4R1-221ENST00000582240 CCDC9Q9Y3X0 531 aaKnown RBP28.7■■■□□ 2.18
PPP4R1-221ENST00000582240 PLCH1Q4KWH8 1693 aa28.7■■■□□ 2.18
PPP4R1-221ENST00000582240 SLIT3O75094 1523 aa28.69■■■□□ 2.18
PPP4R1-221ENST00000582240 USP31Q70CQ4 1352 aa28.69■■■□□ 2.18
PPP4R1-221ENST00000582240 GJD4Q96KN9 370 aaPredicted RBP28.68■■■□□ 2.18
PPP4R1-221ENST00000582240 STRN4Q9NRL3 753 aa28.68■■■□□ 2.18
PPP4R1-221ENST00000582240 COL14A1Q05707 1796 aaKnown RBP28.67■■■□□ 2.18
PPP4R1-221ENST00000582240 MYOM1P52179 1685 aa28.67■■■□□ 2.18
PPP4R1-221ENST00000582240 CPDO75976 1380 aa28.66■■■□□ 2.18
PPP4R1-221ENST00000582240 VPS72Q15906 364 aa28.66■■■□□ 2.18
PPP4R1-221ENST00000582240 GGNBP2Q9H3C7 697 aa28.66■■■□□ 2.18
PPP4R1-221ENST00000582240 KCNH5Q8NCM2 988 aa28.65■■■□□ 2.18
PPP4R1-221ENST00000582240 KIF7Q2M1P5 1343 aa28.65■■■□□ 2.18
PPP4R1-221ENST00000582240 FYB1O15117 783 aa28.64■■■□□ 2.18
PPP4R1-221ENST00000582240 FBLN1P23142 703 aa28.64■■■□□ 2.18
PPP4R1-221ENST00000582240 ARHGEF25Q86VW2 580 aa28.63■■■□□ 2.17
PPP4R1-221ENST00000582240 PANK3Q9H999 370 aa28.63■■■□□ 2.17
PPP4R1-221ENST00000582240 NSD3Q9BZ95 1437 aa28.62■■■□□ 2.17
PPP4R1-221ENST00000582240 SOCS7O14512 581 aa28.62■■■□□ 2.17
PPP4R1-221ENST00000582240 EVA1CP58658 441 aa28.62■■■□□ 2.17
PPP4R1-221ENST00000582240 COG3Q96JB2 828 aa28.61■■■□□ 2.17
PPP4R1-221ENST00000582240 CAMTA1Q9Y6Y1 1673 aa28.61■■■□□ 2.17
PPP4R1-221ENST00000582240 RGS12O14924 1447 aa28.6■■■□□ 2.17
PPP4R1-221ENST00000582240 NWD2Q9ULI1 1742 aa28.6■■■□□ 2.17
PPP4R1-221ENST00000582240 AXIN2Q9Y2T1 843 aa28.6■■■□□ 2.17
PPP4R1-221ENST00000582240 NRAPQ86VF7 1730 aa28.6■■■□□ 2.17
PPP4R1-221ENST00000582240 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.6■■■□□ 2.17
PPP4R1-221ENST00000582240 OVOS2A0A0J9YW53 1432 aa28.6■■■□□ 2.17
PPP4R1-221ENST00000582240 OVOS2Q6IE36 1432 aa28.6■■■□□ 2.17
PPP4R1-221ENST00000582240 NFAT5O94916 1531 aa28.59■■■□□ 2.17
PPP4R1-221ENST00000582240 GLI3P10071 1580 aa28.58■■■□□ 2.17
PPP4R1-221ENST00000582240 LARP1Q6PKG0 1096 aaKnown RBP28.57■■■□□ 2.16
PPP4R1-221ENST00000582240 AATKQ6ZMQ8 1374 aa28.57■■■□□ 2.16
PPP4R1-221ENST00000582240 SPATA31A5Q5VU36 1347 aa28.55■■■□□ 2.16
PPP4R1-221ENST00000582240 SPATA31A7Q8IWB4 1347 aa28.55■■■□□ 2.16
PPP4R1-221ENST00000582240 USP35Q9P2H5 1018 aa28.55■■■□□ 2.16
PPP4R1-221ENST00000582240 LMO7Q8WWI1 1683 aa28.54■■■□□ 2.16
PPP4R1-221ENST00000582240 CDK12Q9NYV4 1490 aaPredicted RBP28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms