RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 COL14A1Q05707 1796 aaKnown RBP28.39■■■□□ 2.13
NDEL1-209ENST00000580738 ADGRB2O60241 1585 aa28.38■■■□□ 2.13
NDEL1-209ENST00000580738 ALS2Q96Q42 1657 aa28.38■■■□□ 2.13
NDEL1-209ENST00000580738 MINK1Q8N4C8 1332 aaPredicted RBP28.38■■■□□ 2.13
NDEL1-209ENST00000580738 ADGRB1O14514 1584 aa28.35■■■□□ 2.13
NDEL1-209ENST00000580738 RGPD1P0DJD0 1748 aa28.35■■■□□ 2.13
NDEL1-209ENST00000580738 PAK3O75914 559 aaPredicted RBP28.34■■■□□ 2.13
NDEL1-209ENST00000580738 EZH2Q15910 746 aaKnown RBP28.34■■■□□ 2.13
NDEL1-209ENST00000580738 PRDM11Q9NQV5 511 aa28.34■■■□□ 2.13
NDEL1-209ENST00000580738 DISP2A7MBM2 1401 aa28.33■■■□□ 2.13
NDEL1-209ENST00000580738 THSD7AQ9UPZ6 1657 aa28.32■■■□□ 2.12
NDEL1-209ENST00000580738 WASLO00401 505 aaPredicted RBP28.32■■■□□ 2.12
NDEL1-209ENST00000580738 NGDNQ8NEJ9 315 aaKnown RBP28.32■■■□□ 2.12
NDEL1-209ENST00000580738 TULP4Q9NRJ4 1543 aa28.3■■■□□ 2.12
NDEL1-209ENST00000580738 EIF3AQ14152 1382 aaKnown RBP28.29■■■□□ 2.12
NDEL1-209ENST00000580738 TNS1Q9HBL0 1735 aaKnown RBP28.29■■■□□ 2.12
NDEL1-209ENST00000580738 CRYBG1Q9Y4K1 1723 aa28.29■■■□□ 2.12
NDEL1-209ENST00000580738 SPATA31A1Q5TZJ5 1347 aa28.28■■■□□ 2.12
NDEL1-209ENST00000580738 TRIM37O94972 964 aa28.28■■■□□ 2.12
NDEL1-209ENST00000580738 CHRNA2Q15822 529 aa28.28■■■□□ 2.12
NDEL1-209ENST00000580738 CAMKK2Q96RR4 588 aa28.28■■■□□ 2.12
NDEL1-209ENST00000580738 KIAA0232Q92628 1395 aa28.26■■■□□ 2.12
NDEL1-209ENST00000580738 KDM2AQ9Y2K7 1162 aa28.26■■■□□ 2.11
NDEL1-209ENST00000580738 STRN4Q9NRL3 753 aa28.25■■■□□ 2.11
NDEL1-209ENST00000580738 FAM196AQ6ZSG2 479 aa28.24■■■□□ 2.11
NDEL1-209ENST00000580738 APBA3O96018 575 aa28.22■■■□□ 2.11
NDEL1-209ENST00000580738 ZC3H6P61129 1189 aaKnown RBP28.22■■■□□ 2.11
NDEL1-209ENST00000580738 NUTM2GQ5VZR2 741 aa28.21■■■□□ 2.11
NDEL1-209ENST00000580738 DCAF11Q8TEB1 546 aa28.21■■■□□ 2.11
NDEL1-209ENST00000580738 USP35Q9P2H5 1018 aa28.21■■■□□ 2.11
NDEL1-209ENST00000580738 NUDT16Q96DE0 195 aaKnown RBP28.2■■■□□ 2.1
NDEL1-209ENST00000580738 ATP7BP35670 1465 aa28.17■■■□□ 2.1
NDEL1-209ENST00000580738 PARD3Q8TEW0 1356 aa28.14■■■□□ 2.1
NDEL1-209ENST00000580738 EVA1CP58658 441 aa28.14■■■□□ 2.1
NDEL1-209ENST00000580738 PHRF1Q9P1Y6 1649 aaKnown RBP28.14■■■□□ 2.09
NDEL1-209ENST00000580738 PDE3BQ13370 1112 aa28.13■■■□□ 2.09
NDEL1-209ENST00000580738 BARGINQ6ZT62 677 aa28.13■■■□□ 2.09
NDEL1-209ENST00000580738 RAB3GAP2Q9H2M9 1393 aa28.12■■■□□ 2.09
NDEL1-209ENST00000580738 SSH2Q76I76 1423 aa28.12■■■□□ 2.09
NDEL1-209ENST00000580738 LARP1Q6PKG0 1096 aaKnown RBP28.12■■■□□ 2.09
NDEL1-209ENST00000580738 CDK19Q9BWU1 502 aa28.11■■■□□ 2.09
NDEL1-209ENST00000580738 ACEP12821 1306 aa28.1■■■□□ 2.09
NDEL1-209ENST00000580738 NBPF8Q3BBV2 869 aa28.09■■■□□ 2.09
NDEL1-209ENST00000580738 ITSN1Q15811 1721 aa28.09■■■□□ 2.09
NDEL1-209ENST00000580738 CAMTA1Q9Y6Y1 1673 aa28.08■■■□□ 2.09
NDEL1-209ENST00000580738 POLR3AO14802 1390 aaPredicted RBP28.08■■■□□ 2.09
NDEL1-209ENST00000580738 ARHGEF28Q8N1W1 1705 aaKnown RBP28.07■■■□□ 2.08
NDEL1-209ENST00000580738 TCP11L2Q8N4U5 519 aa28.07■■■□□ 2.08
NDEL1-209ENST00000580738 RREB1Q92766 1687 aa28.07■■■□□ 2.08
NDEL1-209ENST00000580738 NBPF14Q5TI25 921 aa28.06■■■□□ 2.08
NDEL1-209ENST00000580738 STAC3Q96MF2 364 aa28.06■■■□□ 2.08
NDEL1-209ENST00000580738 ABTB2Q8N961 1025 aa28.05■■■□□ 2.08
NDEL1-209ENST00000580738 NUP188Q5SRE5 1749 aa28.04■■■□□ 2.08
NDEL1-209ENST00000580738 YY1P25490 414 aa28.04■■■□□ 2.08
NDEL1-209ENST00000580738 CCDC61Q9Y6R9 512 aa28.04■■■□□ 2.08
NDEL1-209ENST00000580738 PLEKHG3A1L390 1219 aa28.03■■■□□ 2.08
NDEL1-209ENST00000580738 NRKQ7Z2Y5 1582 aa28.03■■■□□ 2.08
NDEL1-209ENST00000580738 CPDO75976 1380 aa28.02■■■□□ 2.08
NDEL1-209ENST00000580738 USP19O94966 1318 aa28.01■■■□□ 2.07
NDEL1-209ENST00000580738 TOPAZ1Q8N9V7 1692 aa28■■■□□ 2.07
NDEL1-209ENST00000580738 LMO7Q8WWI1 1683 aa28■■■□□ 2.07
NDEL1-209ENST00000580738 SPON1Q9HCB6 807 aa27.99■■■□□ 2.07
NDEL1-209ENST00000580738 GCP02774 474 aa27.98■■■□□ 2.07
NDEL1-209ENST00000580738 THRAP3Q9Y2W1 955 aaKnown RBP27.98■■■□□ 2.07
NDEL1-209ENST00000580738 PPP1R1BQ9UD71 204 aaPredicted RBP27.97■■■□□ 2.07
NDEL1-209ENST00000580738 KCNQ2O43526 872 aa27.96■■■□□ 2.07
NDEL1-209ENST00000580738 NLRP13Q86W25 1043 aa27.95■■■□□ 2.06
NDEL1-209ENST00000580738 COL5A2P05997 1499 aaPredicted RBP27.94■■■□□ 2.06
NDEL1-209ENST00000580738 ZBTB7CA1YPR0 619 aa27.91■■■□□ 2.06
NDEL1-209ENST00000580738 PARP4Q9UKK3 1724 aaKnown RBP27.91■■■□□ 2.06
NDEL1-209ENST00000580738 CRB1P82279 1406 aa27.9■■■□□ 2.06
NDEL1-209ENST00000580738 SRPK2P78362 688 aaKnown RBP27.89■■■□□ 2.06
NDEL1-209ENST00000580738 NBPF1Q3BBV0 1214 aa27.89■■■□□ 2.06
NDEL1-209ENST00000580738 PPIP5K1Q6PFW1 1433 aa27.89■■■□□ 2.06
NDEL1-209ENST00000580738 OVOS2A0A0G2JMS6 1433 aa27.88■■■□□ 2.05
NDEL1-209ENST00000580738 OVOS2A0A0J9YW53 1432 aa27.88■■■□□ 2.05
NDEL1-209ENST00000580738 C11orf95C9JLR9 678 aaPredicted RBP27.88■■■□□ 2.05
NDEL1-209ENST00000580738 OVOS2Q6IE36 1432 aa27.88■■■□□ 2.05
NDEL1-209ENST00000580738 PTF1AQ7RTS3 328 aa27.88■■■□□ 2.05
NDEL1-209ENST00000580738 NINLQ9Y2I6 1382 aa27.87■■■□□ 2.05
NDEL1-209ENST00000580738 PLSCR1O15162 318 aa27.87■■■□□ 2.05
NDEL1-209ENST00000580738 ANO8Q9HCE9 1232 aaPredicted RBP27.87■■■□□ 2.05
NDEL1-209ENST00000580738 CABP2Q9NPB3 220 aa27.87■■■□□ 2.05
NDEL1-209ENST00000580738 PEAK1Q9H792 1746 aa27.87■■■□□ 2.05
NDEL1-209ENST00000580738 DCAF8L1A6NGE4 600 aa27.85■■■□□ 2.05
NDEL1-209ENST00000580738 NLRP6P59044 892 aa27.84■■■□□ 2.05
NDEL1-209ENST00000580738 DDB1Q16531 1140 aa27.84■■■□□ 2.05
NDEL1-209ENST00000580738 PDGFDQ9GZP0 370 aaPredicted RBP27.84■■■□□ 2.05
NDEL1-209ENST00000580738 AATKQ6ZMQ8 1374 aa27.83■■■□□ 2.05
NDEL1-209ENST00000580738 TOM1L2Q6ZVM7 507 aa27.82■■■□□ 2.04
NDEL1-209ENST00000580738 PROM2Q8N271 834 aa27.82■■■□□ 2.04
NDEL1-209ENST00000580738 BCL11BQ9C0K0 894 aaPredicted RBP27.82■■■□□ 2.04
NDEL1-209ENST00000580738 LRRC37A3O60309 1634 aa27.81■■■□□ 2.04
NDEL1-209ENST00000580738 CABP1Q9NZU7 370 aa27.81■■■□□ 2.04
NDEL1-209ENST00000580738 AXIN2Q9Y2T1 843 aa27.8■■■□□ 2.04
NDEL1-209ENST00000580738 CENPJQ9HC77 1338 aaPredicted RBP27.8■■■□□ 2.04
NDEL1-209ENST00000580738 BRD4O60885 1362 aaPredicted RBP27.8■■■□□ 2.04
NDEL1-209ENST00000580738 KIAA1210Q9ULL0 1709 aa27.79■■■□□ 2.04
NDEL1-209ENST00000580738 USP6P35125 1406 aa27.79■■■□□ 2.04
NDEL1-209ENST00000580738 MARCH10Q8NA82 808 aaPredicted RBP27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms