RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 BBXQ8WY36 941 aaPredicted RBP7.55□□□□□ -1.2
KPNB1-208ENST00000580019 BMP2P12643 396 aa7.54□□□□□ -1.2
KPNB1-208ENST00000580019 VARSP26640 1264 aaKnown RBP7.54□□□□□ -1.2
KPNB1-208ENST00000580019 DCAF5Q96JK2 942 aa7.54□□□□□ -1.2
KPNB1-208ENST00000580019 DNMT3LQ9UJW3 386 aa7.53□□□□□ -1.2
KPNB1-208ENST00000580019 SOS2Q07890 1332 aaPredicted RBP7.52□□□□□ -1.2
KPNB1-208ENST00000580019 PHF20L1A8MW92 1017 aa7.52□□□□□ -1.21
KPNB1-208ENST00000580019 ZIC2O95409 532 aaPredicted RBP7.52□□□□□ -1.21
KPNB1-208ENST00000580019 ITGB2P05107 769 aa7.52□□□□□ -1.21
KPNB1-208ENST00000580019 MAP3K10Q02779 954 aa7.52□□□□□ -1.21
KPNB1-208ENST00000580019 SPRYD3Q8NCJ5 442 aa7.52□□□□□ -1.21
KPNB1-208ENST00000580019 KDM4AO75164 1064 aa7.51□□□□□ -1.21
KPNB1-208ENST00000580019 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.51□□□□□ -1.21
KPNB1-208ENST00000580019 LINC00528Q8N1L1 170 aa7.51□□□□□ -1.21
KPNB1-208ENST00000580019 ZFAND3Q9H8U3 227 aa7.51□□□□□ -1.21
KPNB1-208ENST00000580019 USP46P62068 366 aa7.5□□□□□ -1.21
KPNB1-208ENST00000580019 LINC01559Q495D7 138 aa7.5□□□□□ -1.21
KPNB1-208ENST00000580019 PTSQ03393 145 aa7.49□□□□□ -1.21
KPNB1-208ENST00000580019 ITPKCQ96DU7 683 aa7.49□□□□□ -1.21
KPNB1-208ENST00000580019 GNPATO15228 680 aa7.48□□□□□ -1.21
KPNB1-208ENST00000580019 CCNYL3P0C7X3 344 aa7.48□□□□□ -1.21
KPNB1-208ENST00000580019 CD46P15529 392 aa7.48□□□□□ -1.21
KPNB1-208ENST00000580019 BAP1Q92560 729 aa7.48□□□□□ -1.21
KPNB1-208ENST00000580019 UNC93B1Q9H1C4 597 aa7.48□□□□□ -1.21
KPNB1-208ENST00000580019 ENAMQ9NRM1 1142 aa7.48□□□□□ -1.21
KPNB1-208ENST00000580019 BTBD11A6QL63 1104 aa7.47□□□□□ -1.21
KPNB1-208ENST00000580019 LYPD4Q6UWN0 246 aa7.47□□□□□ -1.21
KPNB1-208ENST00000580019 ZNF511Q8NB15 262 aa7.47□□□□□ -1.21
KPNB1-208ENST00000580019 HLA-CQ95604 372 aa7.47□□□□□ -1.21
KPNB1-208ENST00000580019 KRTAP4-12Q9BQ66 201 aa7.47□□□□□ -1.21
KPNB1-208ENST00000580019 ADAMTS2O95450 1211 aa7.46□□□□□ -1.22
KPNB1-208ENST00000580019 MEIOBQ8N635 442 aa7.46□□□□□ -1.22
KPNB1-208ENST00000580019 CCDC155Q8N6L0 562 aa7.46□□□□□ -1.22
KPNB1-208ENST00000580019 FAM174AQ8TBP5 190 aa7.46□□□□□ -1.22
KPNB1-208ENST00000580019 PHOX2BQ99453 314 aa7.46□□□□□ -1.22
KPNB1-208ENST00000580019 SV2AQ7L0J3 742 aa7.45□□□□□ -1.22
KPNB1-208ENST00000580019 RETREG3Q86VR2 466 aa7.45□□□□□ -1.22
KPNB1-208ENST00000580019 VWA5B2Q8N398 1253 aa7.45□□□□□ -1.22
KPNB1-208ENST00000580019 HOXA2O43364 376 aa7.44□□□□□ -1.22
KPNB1-208ENST00000580019 MS4A1P11836 297 aa7.44□□□□□ -1.22
KPNB1-208ENST00000580019 BAG6P46379 1132 aa7.44□□□□□ -1.22
KPNB1-208ENST00000580019 NR5A1Q13285 461 aa7.44□□□□□ -1.22
KPNB1-208ENST00000580019 BEND7Q8N7W2 519 aaPredicted RBP7.44□□□□□ -1.22
KPNB1-208ENST00000580019 CDK15Q96Q40 435 aa7.44□□□□□ -1.22
KPNB1-208ENST00000580019 CDC14CA4D256 554 aa7.43□□□□□ -1.22
KPNB1-208ENST00000580019 TTLL8A6PVC2 850 aa7.43□□□□□ -1.22
KPNB1-208ENST00000580019 SPTLC1O15269 473 aa7.43□□□□□ -1.22
KPNB1-208ENST00000580019 CELA2BP08218 269 aaPredicted RBP7.43□□□□□ -1.22
KPNB1-208ENST00000580019 PODNQ7Z5L7 613 aa7.43□□□□□ -1.22
KPNB1-208ENST00000580019 SYMPKQ92797 1274 aaKnown RBP7.43□□□□□ -1.22
KPNB1-208ENST00000580019 CNTNAP5Q8WYK1 1306 aa7.43□□□□□ -1.22
KPNB1-208ENST00000580019 SRSF11Q05519 484 aaKnown RBP7.42□□□□□ -1.22
KPNB1-208ENST00000580019 ARID5BQ14865 1188 aa7.42□□□□□ -1.22
KPNB1-208ENST00000580019 TSEN34Q9BSV6 310 aaKnown RBP7.42□□□□□ -1.22
KPNB1-208ENST00000580019 EVA1BQ9NVM1 165 aa7.42□□□□□ -1.22
KPNB1-208ENST00000580019 ITGA6P23229 1130 aa7.41□□□□□ -1.22
KPNB1-208ENST00000580019 PTPRNQ16849 979 aa7.41□□□□□ -1.22
KPNB1-208ENST00000580019 KRTAP9-9Q9BYP9 154 aa7.41□□□□□ -1.22
KPNB1-208ENST00000580019 KRTAP9-4Q9BYQ2 154 aa7.41□□□□□ -1.22
KPNB1-208ENST00000580019 SLC35F4A4IF30 521 aa7.4□□□□□ -1.22
KPNB1-208ENST00000580019 NR3C2P08235 984 aa7.4□□□□□ -1.22
KPNB1-208ENST00000580019 FURINP09958 794 aa7.4□□□□□ -1.22
KPNB1-208ENST00000580019 GUCA2AQ02747 115 aa7.4□□□□□ -1.22
KPNB1-208ENST00000580019 KCNH2Q12809 1159 aa7.4□□□□□ -1.22
KPNB1-208ENST00000580019 FIGNL2A6NMB9 653 aa7.39□□□□□ -1.23
KPNB1-208ENST00000580019 KCNV2Q8TDN2 545 aa7.39□□□□□ -1.23
KPNB1-208ENST00000580019 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.39□□□□□ -1.23
KPNB1-208ENST00000580019 KRTAP4-8A0A0G2JLE6 195 aa7.37□□□□□ -1.23
KPNB1-208ENST00000580019 SH3RF1Q7Z6J0 888 aa7.36□□□□□ -1.23
KPNB1-208ENST00000580019 NEDD1Q8NHV4 660 aa7.35□□□□□ -1.23
KPNB1-208ENST00000580019 GPR37O15354 613 aa7.34□□□□□ -1.23
KPNB1-208ENST00000580019 GRM5P41594 1212 aa7.34□□□□□ -1.23
KPNB1-208ENST00000580019 C6orf229H3BNL8 230 aa7.33□□□□□ -1.24
KPNB1-208ENST00000580019 SEMA3EO15041 775 aa7.32□□□□□ -1.24
KPNB1-208ENST00000580019 RBM26Q5T8P6 1007 aaKnown RBP7.32□□□□□ -1.24
KPNB1-208ENST00000580019 FOXJ1Q92949 421 aa7.31□□□□□ -1.24
KPNB1-208ENST00000580019 KRBA1A5PL33 1030 aa7.3□□□□□ -1.24
KPNB1-208ENST00000580019 BCRP11274 1271 aa7.3□□□□□ -1.24
KPNB1-208ENST00000580019 GAS6Q14393 721 aa7.3□□□□□ -1.24
KPNB1-208ENST00000580019 CFAP44Q96MT7 982 aa7.3□□□□□ -1.24
KPNB1-208ENST00000580019 EMILIN1Q9Y6C2 1016 aa7.3□□□□□ -1.24
KPNB1-208ENST00000580019 SPINT1O43278 529 aa7.29□□□□□ -1.24
KPNB1-208ENST00000580019 FDX1P10109 184 aa7.29□□□□□ -1.24
KPNB1-208ENST00000580019 ALYREFQ86V81 257 aaKnown RBP7.29□□□□□ -1.24
KPNB1-208ENST00000580019 PAXIP1Q6ZW49 1069 aaPredicted RBP7.28□□□□□ -1.24
KPNB1-208ENST00000580019 NUTM1Q86Y26 1132 aa7.28□□□□□ -1.24
KPNB1-208ENST00000580019 MBIPQ9NS73 344 aa7.27□□□□□ -1.25
KPNB1-208ENST00000580019 PCDHGC3Q9UN70 934 aa7.27□□□□□ -1.25
KPNB1-208ENST00000580019 FSHRP23945 695 aa7.26□□□□□ -1.25
KPNB1-208ENST00000580019 CTHP32929 405 aa7.26□□□□□ -1.25
KPNB1-208ENST00000580019 AGERQ15109 404 aa7.26□□□□□ -1.25
KPNB1-208ENST00000580019 ZMYM1Q5SVZ6 1142 aa7.26□□□□□ -1.25
KPNB1-208ENST00000580019 SMYD5Q6GMV2 418 aa7.26□□□□□ -1.25
KPNB1-208ENST00000580019 DESI1Q6ICB0 168 aa7.26□□□□□ -1.25
KPNB1-208ENST00000580019 PRR7Q8TB68 274 aa7.25□□□□□ -1.25
KPNB1-208ENST00000580019 LRRC4BQ9NT99 713 aa7.25□□□□□ -1.25
KPNB1-208ENST00000580019 IGF1RP08069 1367 aa7.24□□□□□ -1.25
KPNB1-208ENST00000580019 BPHLQ86WA6 291 aaPredicted RBP7.24□□□□□ -1.25
KPNB1-208ENST00000580019 CCDC116Q8IYX3 515 aa7.24□□□□□ -1.25
KPNB1-208ENST00000580019 SENP3-EIF4A1A0A087X0R7 540 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms