RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 SPATA31A6Q5VVP1 1343 aa31.56■■■□□ 2.64
NDEL1-207ENST00000580012 A0A1W2PP64 1363 aa31.56■■■□□ 2.64
NDEL1-207ENST00000580012 ARHGEF10O15013 1369 aa31.56■■■□□ 2.64
NDEL1-207ENST00000580012 ANKRD36BQ8N2N9 1353 aa31.56■■■□□ 2.64
NDEL1-207ENST00000580012 TTC21BQ7Z4L5 1316 aa31.55■■■□□ 2.64
NDEL1-207ENST00000580012 PAK3O75914 559 aaPredicted RBP31.55■■■□□ 2.64
NDEL1-207ENST00000580012 TRPM3Q9HCF6 1732 aaPredicted RBP31.53■■■□□ 2.64
NDEL1-207ENST00000580012 POLR3GLQ9BT43 218 aa31.53■■■□□ 2.64
NDEL1-207ENST00000580012 WASHC2AQ641Q2 1341 aa31.52■■■□□ 2.64
NDEL1-207ENST00000580012 RGS17Q9UGC6 210 aaPredicted RBP31.52■■■□□ 2.64
NDEL1-207ENST00000580012 CCDC7Q96M83 1385 aa31.51■■■□□ 2.63
NDEL1-207ENST00000580012 TTC21AQ8NDW8 1320 aa31.5■■■□□ 2.63
NDEL1-207ENST00000580012 LMOD2Q6P5Q4 547 aa31.5■■■□□ 2.63
NDEL1-207ENST00000580012 ABTB2Q8N961 1025 aa31.49■■■□□ 2.63
NDEL1-207ENST00000580012 CARD14Q9BXL6 1004 aa31.49■■■□□ 2.63
NDEL1-207ENST00000580012 EDC4Q6P2E9 1401 aaKnown RBP31.48■■■□□ 2.63
NDEL1-207ENST00000580012 SHPRHQ149N8 1683 aa31.48■■■□□ 2.63
NDEL1-207ENST00000580012 AKAP12Q02952 1782 aa31.45■■■□□ 2.62
NDEL1-207ENST00000580012 PANK3Q9H999 370 aa31.44■■■□□ 2.62
NDEL1-207ENST00000580012 COL22A1Q8NFW1 1626 aaPredicted RBP31.44■■■□□ 2.62
NDEL1-207ENST00000580012 ALS2Q96Q42 1657 aa31.44■■■□□ 2.62
NDEL1-207ENST00000580012 NLRP13Q86W25 1043 aa31.43■■■□□ 2.62
NDEL1-207ENST00000580012 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.43■■■□□ 2.62
NDEL1-207ENST00000580012 CABLES1Q8TDN4 633 aa31.43■■■□□ 2.62
NDEL1-207ENST00000580012 NUTM2BA6NNL0 878 aaPredicted RBP31.42■■■□□ 2.62
NDEL1-207ENST00000580012 NUTM2EB1AL46 878 aaPredicted RBP31.42■■■□□ 2.62
NDEL1-207ENST00000580012 NUTM2GQ5VZR2 741 aa31.42■■■□□ 2.62
NDEL1-207ENST00000580012 NUTM2AQ8IVF1 878 aaPredicted RBP31.42■■■□□ 2.62
NDEL1-207ENST00000580012 NLRP6P59044 892 aa31.41■■■□□ 2.62
NDEL1-207ENST00000580012 USP19O94966 1318 aa31.41■■■□□ 2.62
NDEL1-207ENST00000580012 MYOM1P52179 1685 aa31.41■■■□□ 2.62
NDEL1-207ENST00000580012 USP31Q70CQ4 1352 aa31.41■■■□□ 2.62
NDEL1-207ENST00000580012 LRP6O75581 1613 aa31.39■■■□□ 2.62
NDEL1-207ENST00000580012 MON2Q7Z3U7 1717 aa31.39■■■□□ 2.62
NDEL1-207ENST00000580012 NME9Q86XW9 330 aa31.39■■■□□ 2.62
NDEL1-207ENST00000580012 NRKQ7Z2Y5 1582 aa31.38■■■□□ 2.61
NDEL1-207ENST00000580012 ZRANB1Q9UGI0 708 aa31.37■■■□□ 2.61
NDEL1-207ENST00000580012 FYB1O15117 783 aa31.36■■■□□ 2.61
NDEL1-207ENST00000580012 POTEAQ6S8J7 498 aa31.34■■■□□ 2.61
NDEL1-207ENST00000580012 NSD3Q9BZ95 1437 aa31.33■■■□□ 2.61
NDEL1-207ENST00000580012 ADAMTS2O95450 1211 aa31.33■■■□□ 2.61
NDEL1-207ENST00000580012 GCP02774 474 aa31.33■■■□□ 2.61
NDEL1-207ENST00000580012 PER1O15534 1290 aaPredicted RBP31.32■■■□□ 2.6
NDEL1-207ENST00000580012 PLEKHG5O94827 1062 aa31.31■■■□□ 2.6
NDEL1-207ENST00000580012 PIK3C2AO00443 1686 aa31.3■■■□□ 2.6
NDEL1-207ENST00000580012 HAP1P54257 671 aaPredicted RBP31.29■■■□□ 2.6
NDEL1-207ENST00000580012 CGNL1Q0VF96 1302 aa31.27■■■□□ 2.6
NDEL1-207ENST00000580012 OVOS2A0A0J9YW53 1432 aa31.27■■■□□ 2.6
NDEL1-207ENST00000580012 OVOS2Q6IE36 1432 aa31.27■■■□□ 2.6
NDEL1-207ENST00000580012 KCNH5Q8NCM2 988 aa31.27■■■□□ 2.6
NDEL1-207ENST00000580012 SLIT3O75094 1523 aa31.26■■■□□ 2.59
NDEL1-207ENST00000580012 MEX3CQ5U5Q3 659 aaKnown RBP31.26■■■□□ 2.59
NDEL1-207ENST00000580012 GGNBP2Q9H3C7 697 aa31.26■■■□□ 2.59
NDEL1-207ENST00000580012 FAM83GA6ND36 823 aa31.25■■■□□ 2.59
NDEL1-207ENST00000580012 FNBP4Q8N3X1 1017 aaPredicted RBP31.25■■■□□ 2.59
NDEL1-207ENST00000580012 COG3Q96JB2 828 aa31.25■■■□□ 2.59
NDEL1-207ENST00000580012 KNSTRNQ9Y448 316 aa31.24■■■□□ 2.59
NDEL1-207ENST00000580012 CPDO75976 1380 aa31.24■■■□□ 2.59
NDEL1-207ENST00000580012 C8orf37Q96NL8 207 aa31.23■■■□□ 2.59
NDEL1-207ENST00000580012 CRYBG1Q9Y4K1 1723 aa31.22■■■□□ 2.59
NDEL1-207ENST00000580012 ZC3H6P61129 1189 aaKnown RBP31.22■■■□□ 2.59
NDEL1-207ENST00000580012 AMER1Q5JTC6 1135 aaPredicted RBP31.22■■■□□ 2.59
NDEL1-207ENST00000580012 NGLY1Q96IV0 654 aa31.22■■■□□ 2.59
NDEL1-207ENST00000580012 KIAA0232Q92628 1395 aa31.2■■■□□ 2.59
NDEL1-207ENST00000580012 ZNF316A6NFI3 1004 aaPredicted RBP31.2■■■□□ 2.59
NDEL1-207ENST00000580012 ARHGEF25Q86VW2 580 aa31.2■■■□□ 2.59
NDEL1-207ENST00000580012 USP54Q70EL1 1684 aa31.19■■■□□ 2.58
NDEL1-207ENST00000580012 PRDM11Q9NQV5 511 aa31.18■■■□□ 2.58
NDEL1-207ENST00000580012 ABCA3Q99758 1704 aa31.18■■■□□ 2.58
NDEL1-207ENST00000580012 MARF1Q9Y4F3 1742 aaKnown RBP31.17■■■□□ 2.58
NDEL1-207ENST00000580012 AFF2P51816 1311 aa31.16■■■□□ 2.58
NDEL1-207ENST00000580012 NSD2O96028 1365 aa31.16■■■□□ 2.58
NDEL1-207ENST00000580012 PHRF1Q9P1Y6 1649 aaKnown RBP31.15■■■□□ 2.58
NDEL1-207ENST00000580012 SLIT2O94813 1529 aa31.14■■■□□ 2.58
NDEL1-207ENST00000580012 NFAT5O94916 1531 aa31.14■■■□□ 2.58
NDEL1-207ENST00000580012 NPC1L1Q9UHC9 1359 aa31.14■■■□□ 2.58
NDEL1-207ENST00000580012 SOX12O15370 315 aa31.13■■■□□ 2.57
NDEL1-207ENST00000580012 CHRNA2Q15822 529 aa31.13■■■□□ 2.57
NDEL1-207ENST00000580012 AATKQ6ZMQ8 1374 aa31.12■■■□□ 2.57
NDEL1-207ENST00000580012 BCL9LQ86UU0 1499 aa31.12■■■□□ 2.57
NDEL1-207ENST00000580012 FBLN1P23142 703 aa31.11■■■□□ 2.57
NDEL1-207ENST00000580012 DDX10Q13206 875 aaKnown RBP31.11■■■□□ 2.57
NDEL1-207ENST00000580012 ZNF772Q68DY9 489 aaPredicted RBP31.11■■■□□ 2.57
NDEL1-207ENST00000580012 UNC5CLQ8IV45 518 aa31.1■■■□□ 2.57
NDEL1-207ENST00000580012 USP21Q9UK80 565 aa31.1■■■□□ 2.57
NDEL1-207ENST00000580012 BTG4Q9NY30 223 aa31.09■■■□□ 2.57
NDEL1-207ENST00000580012 AXIN2Q9Y2T1 843 aa31.06■■■□□ 2.56
NDEL1-207ENST00000580012 MAP3K19Q56UN5 1328 aa31.05■■■□□ 2.56
NDEL1-207ENST00000580012 MORC1Q86VD1 984 aa31.05■■■□□ 2.56
NDEL1-207ENST00000580012 COL14A1Q05707 1796 aaKnown RBP31.03■■■□□ 2.56
NDEL1-207ENST00000580012 IP6K1Q92551 441 aa31.03■■■□□ 2.56
NDEL1-207ENST00000580012 RRS1Q15050 365 aaKnown RBP31.02■■■□□ 2.56
NDEL1-207ENST00000580012 CC2D1BQ5T0F9 858 aaKnown RBP31.02■■■□□ 2.56
NDEL1-207ENST00000580012 QTRT2Q9H974 415 aaKnown RBP31.02■■■□□ 2.56
NDEL1-207ENST00000580012 KIF20BQ96Q89 1820 aa31.02■■■□□ 2.56
NDEL1-207ENST00000580012 CAMTA1Q9Y6Y1 1673 aa31.02■■■□□ 2.56
NDEL1-207ENST00000580012 ZBTB7CA1YPR0 619 aa31.01■■■□□ 2.55
NDEL1-207ENST00000580012 TRPC5Q9UL62 973 aaPredicted RBP31.01■■■□□ 2.55
NDEL1-207ENST00000580012 VPS72Q15906 364 aa31■■■□□ 2.55
NDEL1-207ENST00000580012 POLKQ9UBT6 870 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms