RNA–Protein interactions for RNA: ENST00000578993.5

LIMD2-206, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-206ENST00000578993 EP400Q96L91 3159 aa29.24■■■□□ 2.27
LIMD2-206ENST00000578993 NRAPQ86VF7 1730 aa29.24■■■□□ 2.27
LIMD2-206ENST00000578993 FAM83GA6ND36 823 aa29.23■■■□□ 2.27
LIMD2-206ENST00000578993 CCDC61Q9Y6R9 512 aa29.22■■■□□ 2.27
LIMD2-206ENST00000578993 ACEP12821 1306 aa29.21■■■□□ 2.27
LIMD2-206ENST00000578993 PLEKHG3A1L390 1219 aa29.21■■■□□ 2.27
LIMD2-206ENST00000578993 PAK3O75914 559 aaPredicted RBP29.21■■■□□ 2.27
LIMD2-206ENST00000578993 NBPF8Q3BBV2 869 aa29.21■■■□□ 2.27
LIMD2-206ENST00000578993 BRWD3Q6RI45 1802 aa29.21■■■□□ 2.27
LIMD2-206ENST00000578993 COL14A1Q05707 1796 aaKnown RBP29.2■■■□□ 2.26
LIMD2-206ENST00000578993 PHRF1Q9P1Y6 1649 aaKnown RBP29.2■■■□□ 2.26
LIMD2-206ENST00000578993 CABP2Q9NPB3 220 aa29.18■■■□□ 2.26
LIMD2-206ENST00000578993 ROCK2O75116 1388 aaKnown RBP29.17■■■□□ 2.26
LIMD2-206ENST00000578993 TRIM26Q12899 539 aaPredicted RBP29.17■■■□□ 2.26
LIMD2-206ENST00000578993 PPIP5K1Q6PFW1 1433 aa29.16■■■□□ 2.26
LIMD2-206ENST00000578993 ATAD2Q6PL18 1390 aa29.15■■■□□ 2.26
LIMD2-206ENST00000578993 SRPK2P78362 688 aaKnown RBP29.15■■■□□ 2.26
LIMD2-206ENST00000578993 VPS72Q15906 364 aa29.15■■■□□ 2.26
LIMD2-206ENST00000578993 NUTM2GQ5VZR2 741 aa29.11■■■□□ 2.25
LIMD2-206ENST00000578993 BTG4Q9NY30 223 aa29.1■■■□□ 2.25
LIMD2-206ENST00000578993 NRKQ7Z2Y5 1582 aa29.08■■■□□ 2.25
LIMD2-206ENST00000578993 KIAA0232Q92628 1395 aa29.06■■■□□ 2.24
LIMD2-206ENST00000578993 ONECUT3O60422 494 aaPredicted RBP29.06■■■□□ 2.24
LIMD2-206ENST00000578993 CABP1Q9NZU7 370 aa29.06■■■□□ 2.24
LIMD2-206ENST00000578993 CCDC9Q9Y3X0 531 aaKnown RBP29.05■■■□□ 2.24
LIMD2-206ENST00000578993 EVC2Q86UK5 1308 aa29.04■■■□□ 2.24
LIMD2-206ENST00000578993 SEPT12Q8IYM1 358 aa29.04■■■□□ 2.24
LIMD2-206ENST00000578993 AKAP12Q02952 1782 aa29.03■■■□□ 2.24
LIMD2-206ENST00000578993 TONSLQ96HA7 1378 aa29.03■■■□□ 2.24
LIMD2-206ENST00000578993 ABTB2Q8N961 1025 aa29.03■■■□□ 2.24
LIMD2-206ENST00000578993 PRDM11Q9NQV5 511 aa29.03■■■□□ 2.24
LIMD2-206ENST00000578993 CHRNA2Q15822 529 aa29.02■■■□□ 2.24
LIMD2-206ENST00000578993 USP6P35125 1406 aa29.02■■■□□ 2.24
LIMD2-206ENST00000578993 USP19O94966 1318 aa29.01■■■□□ 2.23
LIMD2-206ENST00000578993 ZC3H6P61129 1189 aaKnown RBP29■■■□□ 2.23
LIMD2-206ENST00000578993 SSH2Q76I76 1423 aa29■■■□□ 2.23
LIMD2-206ENST00000578993 PIK3C2AO00443 1686 aa28.99■■■□□ 2.23
LIMD2-206ENST00000578993 LMO7Q8WWI1 1683 aa28.99■■■□□ 2.23
LIMD2-206ENST00000578993 BRD4O60885 1362 aaPredicted RBP28.98■■■□□ 2.23
LIMD2-206ENST00000578993 SPATA31A5Q5VU36 1347 aa28.97■■■□□ 2.23
LIMD2-206ENST00000578993 SPATA31A7Q8IWB4 1347 aa28.97■■■□□ 2.23
LIMD2-206ENST00000578993 CARD11Q9BXL7 1154 aa28.97■■■□□ 2.23
LIMD2-206ENST00000578993 THSD7AQ9UPZ6 1657 aa28.96■■■□□ 2.23
LIMD2-206ENST00000578993 FAM98CQ17RN3 349 aaKnown RBP28.96■■■□□ 2.23
LIMD2-206ENST00000578993 SBNO2Q9Y2G9 1366 aa28.96■■■□□ 2.23
LIMD2-206ENST00000578993 CAMTA1Q9Y6Y1 1673 aa28.95■■■□□ 2.22
LIMD2-206ENST00000578993 CPDO75976 1380 aa28.94■■■□□ 2.22
LIMD2-206ENST00000578993 NLRP13Q86W25 1043 aa28.92■■■□□ 2.22
LIMD2-206ENST00000578993 SLIT3O75094 1523 aa28.92■■■□□ 2.22
LIMD2-206ENST00000578993 GCP02774 474 aa28.91■■■□□ 2.22
LIMD2-206ENST00000578993 KRT27Q7Z3Y8 459 aa28.91■■■□□ 2.22
LIMD2-206ENST00000578993 CCDC125Q86Z20 511 aa28.91■■■□□ 2.22
LIMD2-206ENST00000578993 CPSF1Q10570 1443 aaKnown RBP28.91■■■□□ 2.22
LIMD2-206ENST00000578993 MON2Q7Z3U7 1717 aa28.91■■■□□ 2.22
LIMD2-206ENST00000578993 SPATA31A1Q5TZJ5 1347 aa28.9■■■□□ 2.22
LIMD2-206ENST00000578993 STRN4Q9NRL3 753 aa28.89■■■□□ 2.22
LIMD2-206ENST00000578993 BLMP54132 1417 aaPredicted RBP28.88■■■□□ 2.21
LIMD2-206ENST00000578993 NLRP6P59044 892 aa28.87■■■□□ 2.21
LIMD2-206ENST00000578993 COL18A1P39060 1754 aa28.87■■■□□ 2.21
LIMD2-206ENST00000578993 A0A0G2JS52 829 aa28.86■■■□□ 2.21
LIMD2-206ENST00000578993 MYT1Q01538 1121 aa28.86■■■□□ 2.21
LIMD2-206ENST00000578993 TTC21BQ7Z4L5 1316 aa28.86■■■□□ 2.21
LIMD2-206ENST00000578993 CD163L1Q9NR16 1453 aa28.85■■■□□ 2.21
LIMD2-206ENST00000578993 ZNF692Q9BU19 519 aaPredicted RBP28.85■■■□□ 2.21
LIMD2-206ENST00000578993 LARP1Q6PKG0 1096 aaKnown RBP28.83■■■□□ 2.21
LIMD2-206ENST00000578993 COL5A2P05997 1499 aaPredicted RBP28.82■■■□□ 2.2
LIMD2-206ENST00000578993 RGPD5Q99666 1765 aa28.81■■■□□ 2.2
LIMD2-206ENST00000578993 KTN1Q86UP2 1357 aaKnown RBP28.81■■■□□ 2.2
LIMD2-206ENST00000578993 FAM182BQ5T319 152 aa28.81■■■□□ 2.2
LIMD2-206ENST00000578993 EVA1CP58658 441 aa28.79■■■□□ 2.2
LIMD2-206ENST00000578993 DEFB132Q7Z7B7 95 aa28.79■■■□□ 2.2
LIMD2-206ENST00000578993 TESK2Q96S53 571 aa28.79■■■□□ 2.2
LIMD2-206ENST00000578993 USP35Q9P2H5 1018 aa28.79■■■□□ 2.2
LIMD2-206ENST00000578993 TTC21AQ8NDW8 1320 aa28.78■■■□□ 2.2
LIMD2-206ENST00000578993 USP54Q70EL1 1684 aa28.78■■■□□ 2.2
LIMD2-206ENST00000578993 AATKQ6ZMQ8 1374 aa28.77■■■□□ 2.2
LIMD2-206ENST00000578993 NFAT5O94916 1531 aa28.77■■■□□ 2.2
LIMD2-206ENST00000578993 ST20-MTHFSA0A0A6YYL1 179 aa28.76■■■□□ 2.19
LIMD2-206ENST00000578993 RGPD1P0DJD0 1748 aa28.76■■■□□ 2.19
LIMD2-206ENST00000578993 TNS1Q9HBL0 1735 aaKnown RBP28.75■■■□□ 2.19
LIMD2-206ENST00000578993 ZBTB7CA1YPR0 619 aa28.75■■■□□ 2.19
LIMD2-206ENST00000578993 BARGINQ6ZT62 677 aa28.75■■■□□ 2.19
LIMD2-206ENST00000578993 SLC12A5Q9H2X9 1139 aa28.75■■■□□ 2.19
LIMD2-206ENST00000578993 ZRANB1Q9UGI0 708 aa28.74■■■□□ 2.19
LIMD2-206ENST00000578993 SRCAPQ6ZRS2 3230 aa28.73■■■□□ 2.19
LIMD2-206ENST00000578993 AXIN2Q9Y2T1 843 aa28.73■■■□□ 2.19
LIMD2-206ENST00000578993 PARP4Q9UKK3 1724 aaKnown RBP28.72■■■□□ 2.19
LIMD2-206ENST00000578993 ARHGEF25Q86VW2 580 aa28.72■■■□□ 2.19
LIMD2-206ENST00000578993 TCP11L2Q8N4U5 519 aa28.72■■■□□ 2.19
LIMD2-206ENST00000578993 TMC1Q8TDI8 760 aa28.72■■■□□ 2.19
LIMD2-206ENST00000578993 PUS7Q96PZ0 661 aaKnown RBP28.71■■■□□ 2.19
LIMD2-206ENST00000578993 CRB1P82279 1406 aa28.7■■■□□ 2.19
LIMD2-206ENST00000578993 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.7■■■□□ 2.18
LIMD2-206ENST00000578993 WNK3Q9BYP7 1800 aa28.7■■■□□ 2.18
LIMD2-206ENST00000578993 A0A1W2PP64 1363 aa28.7■■■□□ 2.18
LIMD2-206ENST00000578993 USP31Q70CQ4 1352 aa28.7■■■□□ 2.18
LIMD2-206ENST00000578993 SOX12O15370 315 aa28.69■■■□□ 2.18
LIMD2-206ENST00000578993 SF3B2Q13435 895 aaKnown RBP28.69■■■□□ 2.18
LIMD2-206ENST00000578993 NME9Q86XW9 330 aa28.68■■■□□ 2.18
LIMD2-206ENST00000578993 KCNH5Q8NCM2 988 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms