RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 FAM83GA6ND36 823 aa32.91■■■□□ 2.86
CDKN2A-212ENST00000578845 PLEKHG5O94827 1062 aa32.91■■■□□ 2.86
CDKN2A-212ENST00000578845 PLEKHG3A1L390 1219 aa32.9■■■□□ 2.86
CDKN2A-212ENST00000578845 NRAPQ86VF7 1730 aa32.88■■■□□ 2.85
CDKN2A-212ENST00000578845 TRPM1Q7Z4N2 1603 aa32.88■■■□□ 2.85
CDKN2A-212ENST00000578845 COL14A1Q05707 1796 aaKnown RBP32.88■■■□□ 2.85
CDKN2A-212ENST00000578845 PAK3O75914 559 aaPredicted RBP32.87■■■□□ 2.85
CDKN2A-212ENST00000578845 ACEP12821 1306 aa32.86■■■□□ 2.85
CDKN2A-212ENST00000578845 QRICH2Q9H0J4 1663 aa32.85■■■□□ 2.85
CDKN2A-212ENST00000578845 ONECUT3O60422 494 aaPredicted RBP32.84■■■□□ 2.85
CDKN2A-212ENST00000578845 NBPF8Q3BBV2 869 aa32.83■■■□□ 2.85
CDKN2A-212ENST00000578845 BTG4Q9NY30 223 aa32.81■■■□□ 2.84
CDKN2A-212ENST00000578845 PHRF1Q9P1Y6 1649 aaKnown RBP32.8■■■□□ 2.84
CDKN2A-212ENST00000578845 NEUROD1Q13562 356 aa32.8■■■□□ 2.84
CDKN2A-212ENST00000578845 PPIP5K1Q6PFW1 1433 aa32.79■■■□□ 2.84
CDKN2A-212ENST00000578845 SRPK2P78362 688 aaKnown RBP32.79■■■□□ 2.84
CDKN2A-212ENST00000578845 CCDC125Q86Z20 511 aa32.79■■■□□ 2.84
CDKN2A-212ENST00000578845 SEPT12Q8IYM1 358 aa32.78■■■□□ 2.84
CDKN2A-212ENST00000578845 BRWD3Q6RI45 1802 aa32.77■■■□□ 2.84
CDKN2A-212ENST00000578845 ROCK2O75116 1388 aaKnown RBP32.76■■■□□ 2.83
CDKN2A-212ENST00000578845 CABP2Q9NPB3 220 aa32.76■■■□□ 2.83
CDKN2A-212ENST00000578845 CCDC9Q9Y3X0 531 aaKnown RBP32.76■■■□□ 2.83
CDKN2A-212ENST00000578845 BRD4O60885 1362 aaPredicted RBP32.75■■■□□ 2.83
CDKN2A-212ENST00000578845 PRDM11Q9NQV5 511 aa32.74■■■□□ 2.83
CDKN2A-212ENST00000578845 KIAA0232Q92628 1395 aa32.73■■■□□ 2.83
CDKN2A-212ENST00000578845 USP19O94966 1318 aa32.71■■■□□ 2.83
CDKN2A-212ENST00000578845 NRKQ7Z2Y5 1582 aa32.7■■■□□ 2.83
CDKN2A-212ENST00000578845 BLMP54132 1417 aaPredicted RBP32.7■■■□□ 2.83
CDKN2A-212ENST00000578845 SPATA31A5Q5VU36 1347 aa32.7■■■□□ 2.82
CDKN2A-212ENST00000578845 SPATA31A7Q8IWB4 1347 aa32.7■■■□□ 2.82
CDKN2A-212ENST00000578845 EVC2Q86UK5 1308 aa32.69■■■□□ 2.82
CDKN2A-212ENST00000578845 NUTM2GQ5VZR2 741 aa32.68■■■□□ 2.82
CDKN2A-212ENST00000578845 ABTB2Q8N961 1025 aa32.68■■■□□ 2.82
CDKN2A-212ENST00000578845 USP6P35125 1406 aa32.67■■■□□ 2.82
CDKN2A-212ENST00000578845 KRT27Q7Z3Y8 459 aa32.66■■■□□ 2.82
CDKN2A-212ENST00000578845 CPDO75976 1380 aa32.66■■■□□ 2.82
CDKN2A-212ENST00000578845 FAM98CQ17RN3 349 aaKnown RBP32.65■■■□□ 2.82
CDKN2A-212ENST00000578845 CABP1Q9NZU7 370 aa32.65■■■□□ 2.82
CDKN2A-212ENST00000578845 SRCAPQ6ZRS2 3230 aa32.64■■■□□ 2.82
CDKN2A-212ENST00000578845 THSD7AQ9UPZ6 1657 aa32.63■■■□□ 2.81
CDKN2A-212ENST00000578845 SSH2Q76I76 1423 aa32.63■■■□□ 2.81
CDKN2A-212ENST00000578845 ZC3H6P61129 1189 aaKnown RBP32.63■■■□□ 2.81
CDKN2A-212ENST00000578845 SBNO2Q9Y2G9 1366 aa32.62■■■□□ 2.81
CDKN2A-212ENST00000578845 CHRNA2Q15822 529 aa32.62■■■□□ 2.81
CDKN2A-212ENST00000578845 NLRP13Q86W25 1043 aa32.62■■■□□ 2.81
CDKN2A-212ENST00000578845 LMO7Q8WWI1 1683 aa32.6■■■□□ 2.81
CDKN2A-212ENST00000578845 SPATA31A1Q5TZJ5 1347 aa32.59■■■□□ 2.81
CDKN2A-212ENST00000578845 TONSLQ96HA7 1378 aa32.58■■■□□ 2.81
CDKN2A-212ENST00000578845 A0A0G2JS52 829 aa32.57■■■□□ 2.8
CDKN2A-212ENST00000578845 GCP02774 474 aa32.57■■■□□ 2.8
CDKN2A-212ENST00000578845 MYT1Q01538 1121 aa32.57■■■□□ 2.8
CDKN2A-212ENST00000578845 SLIT3O75094 1523 aa32.56■■■□□ 2.8
CDKN2A-212ENST00000578845 CAMTA1Q9Y6Y1 1673 aa32.56■■■□□ 2.8
CDKN2A-212ENST00000578845 TRIM26Q12899 539 aaPredicted RBP32.56■■■□□ 2.8
CDKN2A-212ENST00000578845 PIK3C2AO00443 1686 aa32.53■■■□□ 2.8
CDKN2A-212ENST00000578845 ZNF692Q9BU19 519 aaPredicted RBP32.52■■■□□ 2.8
CDKN2A-212ENST00000578845 CARD11Q9BXL7 1154 aa32.52■■■□□ 2.8
CDKN2A-212ENST00000578845 STRN4Q9NRL3 753 aa32.52■■■□□ 2.8
CDKN2A-212ENST00000578845 AKAP12Q02952 1782 aa32.52■■■□□ 2.8
CDKN2A-212ENST00000578845 CPSF1Q10570 1443 aaKnown RBP32.51■■■□□ 2.8
CDKN2A-212ENST00000578845 ZRANB1Q9UGI0 708 aa32.51■■■□□ 2.79
CDKN2A-212ENST00000578845 SF3B2Q13435 895 aaKnown RBP32.5■■■□□ 2.79
CDKN2A-212ENST00000578845 NLRP6P59044 892 aa32.49■■■□□ 2.79
CDKN2A-212ENST00000578845 DEFB132Q7Z7B7 95 aa32.48■■■□□ 2.79
CDKN2A-212ENST00000578845 BARGINQ6ZT62 677 aa32.47■■■□□ 2.79
CDKN2A-212ENST00000578845 COL5A2P05997 1499 aaPredicted RBP32.47■■■□□ 2.79
CDKN2A-212ENST00000578845 TTC21BQ7Z4L5 1316 aa32.47■■■□□ 2.79
CDKN2A-212ENST00000578845 EVA1CP58658 441 aa32.46■■■□□ 2.79
CDKN2A-212ENST00000578845 AATKQ6ZMQ8 1374 aa32.45■■■□□ 2.79
CDKN2A-212ENST00000578845 LARP1Q6PKG0 1096 aaKnown RBP32.45■■■□□ 2.79
CDKN2A-212ENST00000578845 TTC21AQ8NDW8 1320 aa32.45■■■□□ 2.78
CDKN2A-212ENST00000578845 RGPD1P0DJD0 1748 aa32.42■■■□□ 2.78
CDKN2A-212ENST00000578845 MON2Q7Z3U7 1717 aa32.41■■■□□ 2.78
CDKN2A-212ENST00000578845 THRAP3Q9Y2W1 955 aaKnown RBP32.41■■■□□ 2.78
CDKN2A-212ENST00000578845 TCP11L2Q8N4U5 519 aa32.4■■■□□ 2.78
CDKN2A-212ENST00000578845 KTN1Q86UP2 1357 aaKnown RBP32.4■■■□□ 2.78
CDKN2A-212ENST00000578845 BAG6P46379 1132 aa32.39■■■□□ 2.78
CDKN2A-212ENST00000578845 FAM182BQ5T319 152 aa32.39■■■□□ 2.78
CDKN2A-212ENST00000578845 USP35Q9P2H5 1018 aa32.39■■■□□ 2.78
CDKN2A-212ENST00000578845 DISP2A7MBM2 1401 aa32.39■■■□□ 2.78
CDKN2A-212ENST00000578845 COL18A1P39060 1754 aa32.39■■■□□ 2.78
CDKN2A-212ENST00000578845 CD163L1Q9NR16 1453 aa32.38■■■□□ 2.77
CDKN2A-212ENST00000578845 CRB1P82279 1406 aa32.37■■■□□ 2.77
CDKN2A-212ENST00000578845 KCNH5Q8NCM2 988 aa32.36■■■□□ 2.77
CDKN2A-212ENST00000578845 PUS7Q96PZ0 661 aaKnown RBP32.36■■■□□ 2.77
CDKN2A-212ENST00000578845 TNS1Q9HBL0 1735 aaKnown RBP32.36■■■□□ 2.77
CDKN2A-212ENST00000578845 FAM196AQ6ZSG2 479 aa32.34■■■□□ 2.77
CDKN2A-212ENST00000578845 ARHGEF25Q86VW2 580 aa32.34■■■□□ 2.77
CDKN2A-212ENST00000578845 NFAT5O94916 1531 aa32.34■■■□□ 2.77
CDKN2A-212ENST00000578845 USP54Q70EL1 1684 aa32.34■■■□□ 2.77
CDKN2A-212ENST00000578845 PARP4Q9UKK3 1724 aaKnown RBP32.33■■■□□ 2.77
CDKN2A-212ENST00000578845 USP31Q70CQ4 1352 aa32.32■■■□□ 2.77
CDKN2A-212ENST00000578845 ABCC6O95255 1503 aa32.31■■■□□ 2.76
CDKN2A-212ENST00000578845 ZBTB7CA1YPR0 619 aa32.3■■■□□ 2.76
CDKN2A-212ENST00000578845 TESK2Q96S53 571 aa32.3■■■□□ 2.76
CDKN2A-212ENST00000578845 PDE3BQ13370 1112 aa32.29■■■□□ 2.76
CDKN2A-212ENST00000578845 AXIN2Q9Y2T1 843 aa32.29■■■□□ 2.76
CDKN2A-212ENST00000578845 WDR17Q8IZU2 1322 aa32.27■■■□□ 2.76
CDKN2A-212ENST00000578845 EDC4Q6P2E9 1401 aaKnown RBP32.26■■■□□ 2.76
CDKN2A-212ENST00000578845 EN1Q05925 392 aaPredicted RBP32.26■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms