RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 USP19O94966 1318 aa17.08■□□□□ 0.32
NDEL1-204ENST00000578172 TWISTNBQ3B726 338 aaPredicted RBP17.07■□□□□ 0.32
NDEL1-204ENST00000578172 SULT6B1Q6IMI4 303 aa17.07■□□□□ 0.32
NDEL1-204ENST00000578172 ATP7AQ04656 1500 aa17.07■□□□□ 0.32
NDEL1-204ENST00000578172 TBC1D32Q96NH3 1257 aa17.07■□□□□ 0.32
NDEL1-204ENST00000578172 SLC26A8Q96RN1 970 aa17.07■□□□□ 0.32
NDEL1-204ENST00000578172 AEBP1Q8IUX7 1158 aa17.06■□□□□ 0.32
NDEL1-204ENST00000578172 TSHZ3Q63HK5 1081 aa17.06■□□□□ 0.32
NDEL1-204ENST00000578172 C16orf71Q8IYS4 520 aaPredicted RBP17.05■□□□□ 0.32
NDEL1-204ENST00000578172 NPATQ14207 1427 aa17.05■□□□□ 0.32
NDEL1-204ENST00000578172 INSRP06213 1382 aa17.05■□□□□ 0.32
NDEL1-204ENST00000578172 ANP32BQ92688 251 aaKnown RBP17.05■□□□□ 0.32
NDEL1-204ENST00000578172 ABCC1P33527 1531 aa17.04■□□□□ 0.32
NDEL1-204ENST00000578172 TRAK2O60296 914 aa17.04■□□□□ 0.32
NDEL1-204ENST00000578172 CHD1LQ86WJ1 897 aa17.04■□□□□ 0.32
NDEL1-204ENST00000578172 NGEFQ8N5V2 710 aa17.04■□□□□ 0.32
NDEL1-204ENST00000578172 C8orf58Q8NAV2 365 aa17.03■□□□□ 0.32
NDEL1-204ENST00000578172 PNNQ9H307 717 aaKnown RBP17.03■□□□□ 0.32
NDEL1-204ENST00000578172 ZCCHC11Q5TAX3 1644 aaKnown RBP17.03■□□□□ 0.32
NDEL1-204ENST00000578172 IQGAP3Q86VI3 1631 aa17.03■□□□□ 0.32
NDEL1-204ENST00000578172 E9PCH4 1651 aa17.03■□□□□ 0.32
NDEL1-204ENST00000578172 F6X3S4 739 aa17.02■□□□□ 0.32
NDEL1-204ENST00000578172 KIF16BQ96L93 1317 aa17.02■□□□□ 0.32
NDEL1-204ENST00000578172 CHMP5Q9NZZ3 219 aa17.02■□□□□ 0.31
NDEL1-204ENST00000578172 POLKQ9UBT6 870 aa17.02■□□□□ 0.31
NDEL1-204ENST00000578172 MCM4P33991 863 aa17.02■□□□□ 0.31
NDEL1-204ENST00000578172 DTNBO60941 627 aa17.01■□□□□ 0.31
NDEL1-204ENST00000578172 MBIPQ9NS73 344 aa17.01■□□□□ 0.31
NDEL1-204ENST00000578172 UNC13BO14795 1591 aa17.01■□□□□ 0.31
NDEL1-204ENST00000578172 MADDQ8WXG6 1647 aa17■□□□□ 0.31
NDEL1-204ENST00000578172 RTF1Q92541 710 aaKnown RBP16.99■□□□□ 0.31
NDEL1-204ENST00000578172 ANKRD36BQ8N2N9 1353 aa16.99■□□□□ 0.31
NDEL1-204ENST00000578172 TRIM6-TRIM34B2RNG4 842 aa16.99■□□□□ 0.31
NDEL1-204ENST00000578172 NGDNQ8NEJ9 315 aaKnown RBP16.99■□□□□ 0.31
NDEL1-204ENST00000578172 OTUD7AQ8TE49 926 aaPredicted RBP16.99■□□□□ 0.31
NDEL1-204ENST00000578172 CEBPAP49715 358 aaPredicted RBP16.99■□□□□ 0.31
NDEL1-204ENST00000578172 RILPL2Q969X0 211 aa16.98■□□□□ 0.31
NDEL1-204ENST00000578172 TRPM2O94759 1503 aa16.98■□□□□ 0.31
NDEL1-204ENST00000578172 ZFYVE16Q7Z3T8 1539 aa16.98■□□□□ 0.31
NDEL1-204ENST00000578172 NFE2L2Q16236 605 aa16.97■□□□□ 0.31
NDEL1-204ENST00000578172 NUDT16Q96DE0 195 aaKnown RBP16.97■□□□□ 0.31
NDEL1-204ENST00000578172 RTEL1-TNFRSF6BF6WH68 1400 aa16.97■□□□□ 0.31
NDEL1-204ENST00000578172 AMPHP49418 695 aa16.97■□□□□ 0.31
NDEL1-204ENST00000578172 GNAI1P63096 354 aa16.97■□□□□ 0.31
NDEL1-204ENST00000578172 SLC52A1Q9NWF4 448 aa16.97■□□□□ 0.31
NDEL1-204ENST00000578172 FOXO3O43524 673 aa16.97■□□□□ 0.31
NDEL1-204ENST00000578172 L1TD1Q5T7N2 865 aaKnown RBP16.97■□□□□ 0.31
NDEL1-204ENST00000578172 MPNDQ8N594 471 aa16.97■□□□□ 0.31
NDEL1-204ENST00000578172 EIF2S2P20042 333 aaKnown RBP16.96■□□□□ 0.31
NDEL1-204ENST00000578172 KDM5AP29375 1690 aaKnown RBP16.96■□□□□ 0.31
NDEL1-204ENST00000578172 CHAMP1Q96JM3 812 aa16.96■□□□□ 0.31
NDEL1-204ENST00000578172 SLC4A2P04920 1241 aa16.96■□□□□ 0.31
NDEL1-204ENST00000578172 ZBTB40Q9NUA8 1239 aa16.96■□□□□ 0.31
NDEL1-204ENST00000578172 NPC1L1Q9UHC9 1359 aa16.96■□□□□ 0.3
NDEL1-204ENST00000578172 FCHSD2O94868 740 aa16.95■□□□□ 0.3
NDEL1-204ENST00000578172 HSP90AB2PQ58FF8 381 aa16.95■□□□□ 0.3
NDEL1-204ENST00000578172 TAOK2Q9UL54 1235 aa16.95■□□□□ 0.3
NDEL1-204ENST00000578172 DDX49Q9Y6V7 483 aaKnown RBP16.95■□□□□ 0.3
NDEL1-204ENST00000578172 SYNMO15061 1565 aa16.95■□□□□ 0.3
NDEL1-204ENST00000578172 RPGRIP1LQ68CZ1 1315 aa16.95■□□□□ 0.3
NDEL1-204ENST00000578172 MAP4K4O95819 1239 aaPredicted RBP16.94■□□□□ 0.3
NDEL1-204ENST00000578172 EXOC6BQ9Y2D4 811 aa16.94■□□□□ 0.3
NDEL1-204ENST00000578172 TBC1D9Q6ZT07 1266 aa16.94■□□□□ 0.3
NDEL1-204ENST00000578172 MCTP1Q6DN14 999 aa16.94■□□□□ 0.3
NDEL1-204ENST00000578172 SSFA2P28290 1259 aa16.93■□□□□ 0.3
NDEL1-204ENST00000578172 PLEKHF1Q96S99 279 aa16.93■□□□□ 0.3
NDEL1-204ENST00000578172 GOLGA6L22H0YM25 854 aa16.93■□□□□ 0.3
NDEL1-204ENST00000578172 VAMP4O75379 141 aa16.93■□□□□ 0.3
NDEL1-204ENST00000578172 CD2BP2O95400 341 aaKnown RBP16.93■□□□□ 0.3
NDEL1-204ENST00000578172 PLCB2Q00722 1185 aa16.93■□□□□ 0.3
NDEL1-204ENST00000578172 TSPYL4Q9UJ04 414 aa16.93■□□□□ 0.3
NDEL1-204ENST00000578172 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.92■□□□□ 0.3
NDEL1-204ENST00000578172 USHBP1Q8N6Y0 703 aa16.92■□□□□ 0.3
NDEL1-204ENST00000578172 PLXNC1O60486 1568 aa16.92■□□□□ 0.3
NDEL1-204ENST00000578172 YEATS2Q9ULM3 1422 aa16.92■□□□□ 0.3
NDEL1-204ENST00000578172 XRCC6P12956 609 aaKnown RBP eCLIP16.91■□□□□ 0.3
NDEL1-204ENST00000578172 FKBP5Q13451 457 aaPredicted RBP16.91■□□□□ 0.3
NDEL1-204ENST00000578172 TNPO1Q92973 898 aaKnown RBP16.91■□□□□ 0.3
NDEL1-204ENST00000578172 GBP4Q96PP9 640 aa16.91■□□□□ 0.3
NDEL1-204ENST00000578172 LARP6Q9BRS8 491 aaKnown RBP16.91■□□□□ 0.3
NDEL1-204ENST00000578172 ZNF518AQ6AHZ1 1483 aa16.91■□□□□ 0.3
NDEL1-204ENST00000578172 RSPH6AQ9H0K4 717 aa16.91■□□□□ 0.3
NDEL1-204ENST00000578172 CALD1Q05682 793 aaKnown RBP16.9■□□□□ 0.3
NDEL1-204ENST00000578172 CCDC27Q2M243 656 aa16.9■□□□□ 0.3
NDEL1-204ENST00000578172 MEIS3Q99687 375 aa16.9■□□□□ 0.3
NDEL1-204ENST00000578172 ABCA6Q8N139 1617 aa16.9■□□□□ 0.3
NDEL1-204ENST00000578172 NINLQ9Y2I6 1382 aa16.9■□□□□ 0.3
NDEL1-204ENST00000578172 NUCB1Q02818 461 aa16.9■□□□□ 0.3
NDEL1-204ENST00000578172 HSP90AA2PQ14568 343 aaPredicted RBP16.89■□□□□ 0.29
NDEL1-204ENST00000578172 CCDC9Q9Y3X0 531 aaKnown RBP16.89■□□□□ 0.29
NDEL1-204ENST00000578172 SPHKAPQ2M3C7 1700 aa16.89■□□□□ 0.29
NDEL1-204ENST00000578172 OS9Q13438 667 aaPredicted RBP16.89■□□□□ 0.29
NDEL1-204ENST00000578172 CASC1Q6TDU7 716 aa16.89■□□□□ 0.29
NDEL1-204ENST00000578172 MRPL50Q8N5N7 158 aaKnown RBP16.89■□□□□ 0.29
NDEL1-204ENST00000578172 IL1RAPL2Q9NP60 686 aa16.89■□□□□ 0.29
NDEL1-204ENST00000578172 SMC5Q8IY18 1101 aa16.88■□□□□ 0.29
NDEL1-204ENST00000578172 API5Q9BZZ5 524 aaKnown RBP16.88■□□□□ 0.29
NDEL1-204ENST00000578172 RRAGDQ9NQL2 400 aaPredicted RBP16.88■□□□□ 0.29
NDEL1-204ENST00000578172 WASLO00401 505 aaPredicted RBP16.88■□□□□ 0.29
NDEL1-204ENST00000578172 HDAC1Q13547 482 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms