RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 BTG4Q9NY30 223 aa23.26■■□□□ 1.31
VAPA-204ENST00000577901 ALS2Q96Q42 1657 aa23.25■■□□□ 1.31
VAPA-204ENST00000577901 PIAS4Q8N2W9 510 aaPredicted RBP23.25■■□□□ 1.31
VAPA-204ENST00000577901 A0A0G2JS52 829 aa23.24■■□□□ 1.31
VAPA-204ENST00000577901 MYT1Q01538 1121 aa23.24■■□□□ 1.31
VAPA-204ENST00000577901 NGDNQ8NEJ9 315 aaKnown RBP23.24■■□□□ 1.31
VAPA-204ENST00000577901 NRAPQ86VF7 1730 aa23.24■■□□□ 1.31
VAPA-204ENST00000577901 FAM98CQ17RN3 349 aaKnown RBP23.23■■□□□ 1.31
VAPA-204ENST00000577901 COL14A1Q05707 1796 aaKnown RBP23.22■■□□□ 1.31
VAPA-204ENST00000577901 PAK3O75914 559 aaPredicted RBP23.22■■□□□ 1.31
VAPA-204ENST00000577901 NUDT16Q96DE0 195 aaKnown RBP23.18■■□□□ 1.3
VAPA-204ENST00000577901 ARHGEF28Q8N1W1 1705 aaKnown RBP23.17■■□□□ 1.3
VAPA-204ENST00000577901 ATP7BP35670 1465 aa23.17■■□□□ 1.3
VAPA-204ENST00000577901 CRYBG1Q9Y4K1 1723 aa23.16■■□□□ 1.3
VAPA-204ENST00000577901 SPATA31A5Q5VU36 1347 aa23.16■■□□□ 1.3
VAPA-204ENST00000577901 SPATA31A7Q8IWB4 1347 aa23.16■■□□□ 1.3
VAPA-204ENST00000577901 PRDM11Q9NQV5 511 aa23.16■■□□□ 1.3
VAPA-204ENST00000577901 BAG6P46379 1132 aa23.15■■□□□ 1.3
VAPA-204ENST00000577901 ITSN1Q15811 1721 aa23.14■■□□□ 1.3
VAPA-204ENST00000577901 CDK19Q9BWU1 502 aa23.13■■□□□ 1.29
VAPA-204ENST00000577901 KIAA0232Q92628 1395 aa23.12■■□□□ 1.29
VAPA-204ENST00000577901 FAM182BQ5T319 152 aa23.1■■□□□ 1.29
VAPA-204ENST00000577901 CHRNA2Q15822 529 aa23.09■■□□□ 1.29
VAPA-204ENST00000577901 THSD7AQ9UPZ6 1657 aa23.09■■□□□ 1.29
VAPA-204ENST00000577901 NUTM2GQ5VZR2 741 aa23.08■■□□□ 1.29
VAPA-204ENST00000577901 CCDC61Q9Y6R9 512 aa23.08■■□□□ 1.29
VAPA-204ENST00000577901 POLR3AO14802 1390 aaPredicted RBP23.08■■□□□ 1.29
VAPA-204ENST00000577901 PHRF1Q9P1Y6 1649 aaKnown RBP23.08■■□□□ 1.28
VAPA-204ENST00000577901 ACEP12821 1306 aa23.08■■□□□ 1.28
VAPA-204ENST00000577901 SPATA31A1Q5TZJ5 1347 aa23.08■■□□□ 1.28
VAPA-204ENST00000577901 ZC3H6P61129 1189 aaKnown RBP23.07■■□□□ 1.28
VAPA-204ENST00000577901 NBPF8Q3BBV2 869 aa23.07■■□□□ 1.28
VAPA-204ENST00000577901 RGPD1P0DJD0 1748 aa23.06■■□□□ 1.28
VAPA-204ENST00000577901 PSDA5PKW4 1024 aaPredicted RBP23.06■■□□□ 1.28
VAPA-204ENST00000577901 EN1Q05925 392 aaPredicted RBP23.06■■□□□ 1.28
VAPA-204ENST00000577901 STRN4Q9NRL3 753 aa23.06■■□□□ 1.28
VAPA-204ENST00000577901 TOPAZ1Q8N9V7 1692 aa23.06■■□□□ 1.28
VAPA-204ENST00000577901 KIAA1210Q9ULL0 1709 aa23.05■■□□□ 1.28
VAPA-204ENST00000577901 PLEKHG3A1L390 1219 aa23.05■■□□□ 1.28
VAPA-204ENST00000577901 LRP5O75197 1615 aa23.04■■□□□ 1.28
VAPA-204ENST00000577901 NEUROD1Q13562 356 aa23.02■■□□□ 1.28
VAPA-204ENST00000577901 NBPF1Q3BBV0 1214 aa23.02■■□□□ 1.28
VAPA-204ENST00000577901 SIN3AQ96ST3 1273 aa23.02■■□□□ 1.28
VAPA-204ENST00000577901 DISP2A7MBM2 1401 aa23.01■■□□□ 1.27
VAPA-204ENST00000577901 EVA1CP58658 441 aa23.01■■□□□ 1.27
VAPA-204ENST00000577901 ABTB2Q8N961 1025 aa23.01■■□□□ 1.27
VAPA-204ENST00000577901 USP35Q9P2H5 1018 aa23■■□□□ 1.27
VAPA-204ENST00000577901 TNS1Q9HBL0 1735 aaKnown RBP22.99■■□□□ 1.27
VAPA-204ENST00000577901 NRKQ7Z2Y5 1582 aa22.99■■□□□ 1.27
VAPA-204ENST00000577901 FAM196AQ6ZSG2 479 aa22.99■■□□□ 1.27
VAPA-204ENST00000577901 SSH2Q76I76 1423 aa22.99■■□□□ 1.27
VAPA-204ENST00000577901 SRPK2P78362 688 aaKnown RBP22.98■■□□□ 1.27
VAPA-204ENST00000577901 PCGF6Q9BYE7 350 aa22.98■■□□□ 1.27
VAPA-204ENST00000577901 TRIM37O94972 964 aa22.97■■□□□ 1.27
VAPA-204ENST00000577901 EZH2Q15910 746 aaKnown RBP22.97■■□□□ 1.27
VAPA-204ENST00000577901 BARGINQ6ZT62 677 aa22.97■■□□□ 1.27
VAPA-204ENST00000577901 USP19O94966 1318 aa22.97■■□□□ 1.27
VAPA-204ENST00000577901 CPDO75976 1380 aa22.97■■□□□ 1.27
VAPA-204ENST00000577901 PPIP5K1Q6PFW1 1433 aa22.97■■□□□ 1.27
VAPA-204ENST00000577901 R3HDM1Q15032 1099 aaKnown RBP22.96■■□□□ 1.27
VAPA-204ENST00000577901 CENPJQ9HC77 1338 aaPredicted RBP22.96■■□□□ 1.27
VAPA-204ENST00000577901 CAMTA1Q9Y6Y1 1673 aa22.96■■□□□ 1.27
VAPA-204ENST00000577901 LARP1Q6PKG0 1096 aaKnown RBP22.95■■□□□ 1.26
VAPA-204ENST00000577901 L3MBTL2Q969R5 705 aa22.95■■□□□ 1.26
VAPA-204ENST00000577901 CABP2Q9NPB3 220 aa22.95■■□□□ 1.26
VAPA-204ENST00000577901 PDE3BQ13370 1112 aa22.94■■□□□ 1.26
VAPA-204ENST00000577901 NLRP13Q86W25 1043 aa22.94■■□□□ 1.26
VAPA-204ENST00000577901 LMO7Q8WWI1 1683 aa22.93■■□□□ 1.26
VAPA-204ENST00000577901 GCP02774 474 aa22.93■■□□□ 1.26
VAPA-204ENST00000577901 CAMKK2Q96RR4 588 aa22.93■■□□□ 1.26
VAPA-204ENST00000577901 APBA3O96018 575 aa22.92■■□□□ 1.26
VAPA-204ENST00000577901 TCP11L2Q8N4U5 519 aa22.92■■□□□ 1.26
VAPA-204ENST00000577901 BRD4O60885 1362 aaPredicted RBP22.9■■□□□ 1.26
VAPA-204ENST00000577901 THRAP3Q9Y2W1 955 aaKnown RBP22.9■■□□□ 1.26
VAPA-204ENST00000577901 PARD3Q8TEW0 1356 aa22.89■■□□□ 1.26
VAPA-204ENST00000577901 QRICH2Q9H0J4 1663 aa22.88■■□□□ 1.25
VAPA-204ENST00000577901 COL5A2P05997 1499 aaPredicted RBP22.88■■□□□ 1.25
VAPA-204ENST00000577901 CABP1Q9NZU7 370 aa22.88■■□□□ 1.25
VAPA-204ENST00000577901 USP6P35125 1406 aa22.86■■□□□ 1.25
VAPA-204ENST00000577901 ZBTB7CA1YPR0 619 aa22.85■■□□□ 1.25
VAPA-204ENST00000577901 NLRP6P59044 892 aa22.85■■□□□ 1.25
VAPA-204ENST00000577901 CRB1P82279 1406 aa22.83■■□□□ 1.25
VAPA-204ENST00000577901 TONSLQ96HA7 1378 aa22.83■■□□□ 1.25
VAPA-204ENST00000577901 SLIT3O75094 1523 aa22.82■■□□□ 1.24
VAPA-204ENST00000577901 AATKQ6ZMQ8 1374 aa22.82■■□□□ 1.24
VAPA-204ENST00000577901 PARP4Q9UKK3 1724 aaKnown RBP22.82■■□□□ 1.24
VAPA-204ENST00000577901 EVC2Q86UK5 1308 aa22.82■■□□□ 1.24
VAPA-204ENST00000577901 RREB1Q92766 1687 aa22.81■■□□□ 1.24
VAPA-204ENST00000577901 NBPF14Q5TI25 921 aa22.8■■□□□ 1.24
VAPA-204ENST00000577901 C11orf95C9JLR9 678 aaPredicted RBP22.79■■□□□ 1.24
VAPA-204ENST00000577901 NUP188Q5SRE5 1749 aa22.79■■□□□ 1.24
VAPA-204ENST00000577901 PIK3C2AO00443 1686 aa22.78■■□□□ 1.24
VAPA-204ENST00000577901 TOM1L2Q6ZVM7 507 aa22.77■■□□□ 1.24
VAPA-204ENST00000577901 TRPM1Q7Z4N2 1603 aa22.77■■□□□ 1.24
VAPA-204ENST00000577901 OVOS2A0A0G2JMS6 1433 aa22.76■■□□□ 1.23
VAPA-204ENST00000577901 OVOS2A0A0J9YW53 1432 aa22.76■■□□□ 1.23
VAPA-204ENST00000577901 OVOS2Q6IE36 1432 aa22.76■■□□□ 1.23
VAPA-204ENST00000577901 DDB1Q16531 1140 aa22.75■■□□□ 1.23
VAPA-204ENST00000577901 ZNF692Q9BU19 519 aaPredicted RBP22.75■■□□□ 1.23
VAPA-204ENST00000577901 AXIN2Q9Y2T1 843 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms