RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 TONSLQ96HA7 1378 aa14.47□□□□□ -0.09
SS18-207ENST00000577636 KNDC1Q76NI1 1749 aa14.46□□□□□ -0.09
SS18-207ENST00000577636 PRDM11Q9NQV5 511 aa14.46□□□□□ -0.09
SS18-207ENST00000577636 STRN4Q9NRL3 753 aa14.46□□□□□ -0.09
SS18-207ENST00000577636 TRIM37O94972 964 aa14.45□□□□□ -0.1
SS18-207ENST00000577636 PLCH1Q4KWH8 1693 aa14.45□□□□□ -0.1
SS18-207ENST00000577636 SPATA31A5Q5VU36 1347 aa14.44□□□□□ -0.1
SS18-207ENST00000577636 SPATA31A7Q8IWB4 1347 aa14.44□□□□□ -0.1
SS18-207ENST00000577636 CHRNA2Q15822 529 aa14.44□□□□□ -0.1
SS18-207ENST00000577636 SIN3AQ96ST3 1273 aa14.44□□□□□ -0.1
SS18-207ENST00000577636 USP35Q9P2H5 1018 aa14.44□□□□□ -0.1
SS18-207ENST00000577636 IFT172Q9UG01 1749 aa14.44□□□□□ -0.1
SS18-207ENST00000577636 NUTM2GQ5VZR2 741 aa14.43□□□□□ -0.1
SS18-207ENST00000577636 NWD2Q9ULI1 1742 aa14.43□□□□□ -0.1
SS18-207ENST00000577636 PRR36Q9H6K5 1346 aa14.42□□□□□ -0.1
SS18-207ENST00000577636 WASLO00401 505 aaPredicted RBP14.42□□□□□ -0.1
SS18-207ENST00000577636 APBA3O96018 575 aa14.42□□□□□ -0.1
SS18-207ENST00000577636 ZC3H6P61129 1189 aaKnown RBP14.42□□□□□ -0.1
SS18-207ENST00000577636 ANKARQ7Z5J8 1434 aa14.41□□□□□ -0.1
SS18-207ENST00000577636 ZNF316A6NFI3 1004 aaPredicted RBP14.41□□□□□ -0.1
SS18-207ENST00000577636 EVA1CP58658 441 aa14.41□□□□□ -0.1
SS18-207ENST00000577636 LRP5O75197 1615 aa14.41□□□□□ -0.1
SS18-207ENST00000577636 FAM196AQ6ZSG2 479 aa14.4□□□□□ -0.1
SS18-207ENST00000577636 PDE3BQ13370 1112 aa14.39□□□□□ -0.11
SS18-207ENST00000577636 DCAF11Q8TEB1 546 aa14.39□□□□□ -0.11
SS18-207ENST00000577636 CAMKK2Q96RR4 588 aa14.39□□□□□ -0.11
SS18-207ENST00000577636 SPATA31A1Q5TZJ5 1347 aa14.39□□□□□ -0.11
SS18-207ENST00000577636 ABCA3Q99758 1704 aa14.38□□□□□ -0.11
SS18-207ENST00000577636 KIAA0232Q92628 1395 aa14.38□□□□□ -0.11
SS18-207ENST00000577636 EIF3AQ14152 1382 aaKnown RBP14.37□□□□□ -0.11
SS18-207ENST00000577636 NUDT16Q96DE0 195 aaKnown RBP14.37□□□□□ -0.11
SS18-207ENST00000577636 COL14A1Q05707 1796 aaKnown RBP14.37□□□□□ -0.11
SS18-207ENST00000577636 NRAPQ86VF7 1730 aa14.36□□□□□ -0.11
SS18-207ENST00000577636 DLC1Q96QB1 1528 aa14.36□□□□□ -0.11
SS18-207ENST00000577636 NBPF8Q3BBV2 869 aa14.35□□□□□ -0.11
SS18-207ENST00000577636 NBPF14Q5TI25 921 aa14.35□□□□□ -0.11
SS18-207ENST00000577636 YY1P25490 414 aa14.34□□□□□ -0.11
SS18-207ENST00000577636 CDK19Q9BWU1 502 aa14.34□□□□□ -0.11
SS18-207ENST00000577636 PPP1R1BQ9UD71 204 aaPredicted RBP14.34□□□□□ -0.11
SS18-207ENST00000577636 TRPM3Q9HCF6 1732 aaPredicted RBP14.34□□□□□ -0.11
SS18-207ENST00000577636 RGPD1P0DJD0 1748 aa14.33□□□□□ -0.12
SS18-207ENST00000577636 TULP4Q9NRJ4 1543 aa14.33□□□□□ -0.12
SS18-207ENST00000577636 ZBTB7CA1YPR0 619 aa14.33□□□□□ -0.12
SS18-207ENST00000577636 LARP1Q6PKG0 1096 aaKnown RBP14.33□□□□□ -0.12
SS18-207ENST00000577636 DISP2A7MBM2 1401 aa14.32□□□□□ -0.12
SS18-207ENST00000577636 ABTB2Q8N961 1025 aa14.32□□□□□ -0.12
SS18-207ENST00000577636 ALS2Q96Q42 1657 aa14.32□□□□□ -0.12
SS18-207ENST00000577636 ACEP12821 1306 aa14.31□□□□□ -0.12
SS18-207ENST00000577636 ADGRB1O14514 1584 aa14.3□□□□□ -0.12
SS18-207ENST00000577636 DCAF8L1A6NGE4 600 aa14.3□□□□□ -0.12
SS18-207ENST00000577636 BARGINQ6ZT62 677 aa14.3□□□□□ -0.12
SS18-207ENST00000577636 TCP11L2Q8N4U5 519 aa14.3□□□□□ -0.12
SS18-207ENST00000577636 ADGRB2O60241 1585 aa14.3□□□□□ -0.12
SS18-207ENST00000577636 SPON1Q9HCB6 807 aa14.29□□□□□ -0.12
SS18-207ENST00000577636 THSD7AQ9UPZ6 1657 aa14.29□□□□□ -0.12
SS18-207ENST00000577636 CCDC61Q9Y6R9 512 aa14.28□□□□□ -0.12
SS18-207ENST00000577636 TNS1Q9HBL0 1735 aaKnown RBP14.27□□□□□ -0.12
SS18-207ENST00000577636 SSH2Q76I76 1423 aa14.27□□□□□ -0.12
SS18-207ENST00000577636 PARD3Q8TEW0 1356 aa14.27□□□□□ -0.12
SS18-207ENST00000577636 KCNQ2O43526 872 aa14.27□□□□□ -0.13
SS18-207ENST00000577636 DIEXFQ68CQ4 756 aaKnown RBP14.26□□□□□ -0.13
SS18-207ENST00000577636 NLRP13Q86W25 1043 aa14.26□□□□□ -0.13
SS18-207ENST00000577636 GCP02774 474 aa14.25□□□□□ -0.13
SS18-207ENST00000577636 SRPK2P78362 688 aaKnown RBP14.25□□□□□ -0.13
SS18-207ENST00000577636 L3MBTL2Q969R5 705 aa14.25□□□□□ -0.13
SS18-207ENST00000577636 STAC3Q96MF2 364 aa14.25□□□□□ -0.13
SS18-207ENST00000577636 THRAP3Q9Y2W1 955 aaKnown RBP14.25□□□□□ -0.13
SS18-207ENST00000577636 ATP7BP35670 1465 aa14.25□□□□□ -0.13
SS18-207ENST00000577636 PLEKHG3A1L390 1219 aa14.24□□□□□ -0.13
SS18-207ENST00000577636 CAMTA1Q9Y6Y1 1673 aa14.23□□□□□ -0.13
SS18-207ENST00000577636 CABP2Q9NPB3 220 aa14.23□□□□□ -0.13
SS18-207ENST00000577636 CRYBG1Q9Y4K1 1723 aa14.23□□□□□ -0.13
SS18-207ENST00000577636 POLR3AO14802 1390 aaPredicted RBP14.22□□□□□ -0.13
SS18-207ENST00000577636 TOM1L2Q6ZVM7 507 aa14.22□□□□□ -0.13
SS18-207ENST00000577636 NLRP6P59044 892 aa14.21□□□□□ -0.13
SS18-207ENST00000577636 DDB1Q16531 1140 aa14.21□□□□□ -0.13
SS18-207ENST00000577636 NBPF1Q3BBV0 1214 aa14.21□□□□□ -0.13
SS18-207ENST00000577636 BCL11BQ9C0K0 894 aaPredicted RBP14.21□□□□□ -0.13
SS18-207ENST00000577636 PHRF1Q9P1Y6 1649 aaKnown RBP14.21□□□□□ -0.13
SS18-207ENST00000577636 PTF1AQ7RTS3 328 aa14.2□□□□□ -0.14
SS18-207ENST00000577636 CPDO75976 1380 aa14.2□□□□□ -0.14
SS18-207ENST00000577636 USP19O94966 1318 aa14.19□□□□□ -0.14
SS18-207ENST00000577636 C11orf95C9JLR9 678 aaPredicted RBP14.19□□□□□ -0.14
SS18-207ENST00000577636 ZBTB7AO95365 584 aa14.19□□□□□ -0.14
SS18-207ENST00000577636 ATF5Q9Y2D1 282 aaPredicted RBP14.19□□□□□ -0.14
SS18-207ENST00000577636 ITSN1Q15811 1721 aa14.18□□□□□ -0.14
SS18-207ENST00000577636 PLSCR1O15162 318 aa14.18□□□□□ -0.14
SS18-207ENST00000577636 SOX12O15370 315 aa14.18□□□□□ -0.14
SS18-207ENST00000577636 PDGFDQ9GZP0 370 aaPredicted RBP14.18□□□□□ -0.14
SS18-207ENST00000577636 ANO8Q9HCE9 1232 aaPredicted RBP14.18□□□□□ -0.14
SS18-207ENST00000577636 CABP1Q9NZU7 370 aa14.18□□□□□ -0.14
SS18-207ENST00000577636 PPIP5K1Q6PFW1 1433 aa14.17□□□□□ -0.14
SS18-207ENST00000577636 CSB-PGBD3P0DP91 1061 aa14.17□□□□□ -0.14
SS18-207ENST00000577636 NUP188Q5SRE5 1749 aa14.17□□□□□ -0.14
SS18-207ENST00000577636 ARHGEF28Q8N1W1 1705 aaKnown RBP14.17□□□□□ -0.14
SS18-207ENST00000577636 COL5A2P05997 1499 aaPredicted RBP14.17□□□□□ -0.14
SS18-207ENST00000577636 OVOS2A0A0G2JMS6 1433 aa14.16□□□□□ -0.14
SS18-207ENST00000577636 OVOS2A0A0J9YW53 1432 aa14.16□□□□□ -0.14
SS18-207ENST00000577636 CRB1P82279 1406 aa14.16□□□□□ -0.14
SS18-207ENST00000577636 OVOS2Q6IE36 1432 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms