RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 BRD4O60885 1362 aaPredicted RBP19.77■□□□□ 0.76
GGA3-203ENST00000577435 SLC24A1O60721 1099 aa19.76■□□□□ 0.75
GGA3-203ENST00000577435 PUS7Q96PZ0 661 aaKnown RBP19.76■□□□□ 0.75
GGA3-203ENST00000577435 USP21Q9UK80 565 aa19.76■□□□□ 0.75
GGA3-203ENST00000577435 ATAD2Q6PL18 1390 aa19.74■□□□□ 0.75
GGA3-203ENST00000577435 HAP1P54257 671 aaPredicted RBP19.74■□□□□ 0.75
GGA3-203ENST00000577435 RBM6P78332 1123 aaKnown RBP19.74■□□□□ 0.75
GGA3-203ENST00000577435 TRPC5Q9UL62 973 aaPredicted RBP19.74■□□□□ 0.75
GGA3-203ENST00000577435 ABCA3Q99758 1704 aa19.73■□□□□ 0.75
GGA3-203ENST00000577435 BCL9LQ86UU0 1499 aa19.73■□□□□ 0.75
GGA3-203ENST00000577435 ST20-MTHFSA0A0A6YYL1 179 aa19.73■□□□□ 0.75
GGA3-203ENST00000577435 TESK2Q96S53 571 aa19.73■□□□□ 0.75
GGA3-203ENST00000577435 ZNF692Q9BU19 519 aaPredicted RBP19.73■□□□□ 0.75
GGA3-203ENST00000577435 CDK12Q9NYV4 1490 aaPredicted RBP19.73■□□□□ 0.75
GGA3-203ENST00000577435 SLIT2O94813 1529 aa19.72■□□□□ 0.75
GGA3-203ENST00000577435 ATRNO75882 1429 aa19.71■□□□□ 0.75
GGA3-203ENST00000577435 CRYBG1Q9Y4K1 1723 aa19.71■□□□□ 0.75
GGA3-203ENST00000577435 USP6P35125 1406 aa19.7■□□□□ 0.74
GGA3-203ENST00000577435 UNC5CLQ8IV45 518 aa19.7■□□□□ 0.74
GGA3-203ENST00000577435 SSH2Q76I76 1423 aa19.69■□□□□ 0.74
GGA3-203ENST00000577435 FAM83GA6ND36 823 aa19.69■□□□□ 0.74
GGA3-203ENST00000577435 ABTB2Q8N961 1025 aa19.69■□□□□ 0.74
GGA3-203ENST00000577435 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.68■□□□□ 0.74
GGA3-203ENST00000577435 PLEKHG5O94827 1062 aa19.68■□□□□ 0.74
GGA3-203ENST00000577435 CPSF1Q10570 1443 aaKnown RBP19.68■□□□□ 0.74
GGA3-203ENST00000577435 NLRP13Q86W25 1043 aa19.67■□□□□ 0.74
GGA3-203ENST00000577435 NWD2Q9ULI1 1742 aa19.67■□□□□ 0.74
GGA3-203ENST00000577435 USP47Q96K76 1375 aa19.67■□□□□ 0.74
GGA3-203ENST00000577435 AKAP12Q02952 1782 aa19.67■□□□□ 0.74
GGA3-203ENST00000577435 NUTM2GQ5VZR2 741 aa19.65■□□□□ 0.74
GGA3-203ENST00000577435 GJD4Q96KN9 370 aaPredicted RBP19.65■□□□□ 0.74
GGA3-203ENST00000577435 USP19O94966 1318 aa19.65■□□□□ 0.74
GGA3-203ENST00000577435 PLCH1Q4KWH8 1693 aa19.63■□□□□ 0.73
GGA3-203ENST00000577435 TTC21BQ7Z4L5 1316 aa19.63■□□□□ 0.73
GGA3-203ENST00000577435 SLC12A5Q9H2X9 1139 aa19.63■□□□□ 0.73
GGA3-203ENST00000577435 COL14A1Q05707 1796 aaKnown RBP19.62■□□□□ 0.73
GGA3-203ENST00000577435 PHRF1Q9P1Y6 1649 aaKnown RBP19.62■□□□□ 0.73
GGA3-203ENST00000577435 TTC21AQ8NDW8 1320 aa19.62■□□□□ 0.73
GGA3-203ENST00000577435 VPS72Q15906 364 aa19.62■□□□□ 0.73
GGA3-203ENST00000577435 CD163L1Q9NR16 1453 aa19.61■□□□□ 0.73
GGA3-203ENST00000577435 KTN1Q86UP2 1357 aaKnown RBP19.61■□□□□ 0.73
GGA3-203ENST00000577435 NINLQ9Y2I6 1382 aa19.61■□□□□ 0.73
GGA3-203ENST00000577435 GCP02774 474 aa19.61■□□□□ 0.73
GGA3-203ENST00000577435 NLRP6P59044 892 aa19.61■□□□□ 0.73
GGA3-203ENST00000577435 TMF1P82094 1093 aa19.61■□□□□ 0.73
GGA3-203ENST00000577435 TMC1Q8TDI8 760 aa19.61■□□□□ 0.73
GGA3-203ENST00000577435 PRDM11Q9NQV5 511 aa19.61■□□□□ 0.73
GGA3-203ENST00000577435 BTG4Q9NY30 223 aa19.61■□□□□ 0.73
GGA3-203ENST00000577435 RGS12O14924 1447 aa19.6■□□□□ 0.73
GGA3-203ENST00000577435 CPDO75976 1380 aa19.6■□□□□ 0.73
GGA3-203ENST00000577435 MON2Q7Z3U7 1717 aa19.59■□□□□ 0.73
GGA3-203ENST00000577435 KIAA0232Q92628 1395 aa19.59■□□□□ 0.73
GGA3-203ENST00000577435 ZC3H6P61129 1189 aaKnown RBP19.59■□□□□ 0.73
GGA3-203ENST00000577435 HDGFL2Q7Z4V5 671 aaPredicted RBP19.59■□□□□ 0.73
GGA3-203ENST00000577435 TERF2IPQ9NYB0 399 aa19.59■□□□□ 0.73
GGA3-203ENST00000577435 CDCA8Q53HL2 280 aa19.58■□□□□ 0.72
GGA3-203ENST00000577435 NRKQ7Z2Y5 1582 aa19.57■□□□□ 0.72
GGA3-203ENST00000577435 NRAPQ86VF7 1730 aa19.57■□□□□ 0.72
GGA3-203ENST00000577435 PIK3C2AO00443 1686 aa19.57■□□□□ 0.72
GGA3-203ENST00000577435 ONECUT3O60422 494 aaPredicted RBP19.57■□□□□ 0.72
GGA3-203ENST00000577435 GLI3P10071 1580 aa19.57■□□□□ 0.72
GGA3-203ENST00000577435 SLIT3O75094 1523 aa19.56■□□□□ 0.72
GGA3-203ENST00000577435 CHRNA2Q15822 529 aa19.55■□□□□ 0.72
GGA3-203ENST00000577435 USP31Q70CQ4 1352 aa19.55■□□□□ 0.72
GGA3-203ENST00000577435 EDC4Q6P2E9 1401 aaKnown RBP19.54■□□□□ 0.72
GGA3-203ENST00000577435 A0A1W2PP64 1363 aa19.54■□□□□ 0.72
GGA3-203ENST00000577435 KCNH5Q8NCM2 988 aa19.53■□□□□ 0.72
GGA3-203ENST00000577435 EIF4G2P78344 907 aaKnown RBP eCLIP19.52■□□□□ 0.72
GGA3-203ENST00000577435 UPF1Q92900 1129 aaKnown RBP eCLIP19.52■□□□□ 0.72
GGA3-203ENST00000577435 CCDC9Q9Y3X0 531 aaKnown RBP19.52■□□□□ 0.72
GGA3-203ENST00000577435 SPATA31A5Q5VU36 1347 aa19.51■□□□□ 0.71
GGA3-203ENST00000577435 SPATA31A7Q8IWB4 1347 aa19.51■□□□□ 0.71
GGA3-203ENST00000577435 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.51■□□□□ 0.71
GGA3-203ENST00000577435 AATKQ6ZMQ8 1374 aa19.51■□□□□ 0.71
GGA3-203ENST00000577435 USP54Q70EL1 1684 aa19.5■□□□□ 0.71
GGA3-203ENST00000577435 LMO7Q8WWI1 1683 aa19.5■□□□□ 0.71
GGA3-203ENST00000577435 CAMTA1Q9Y6Y1 1673 aa19.5■□□□□ 0.71
GGA3-203ENST00000577435 ANKRD36BQ8N2N9 1353 aa19.49■□□□□ 0.71
GGA3-203ENST00000577435 ARHGEF25Q86VW2 580 aa19.49■□□□□ 0.71
GGA3-203ENST00000577435 NME9Q86XW9 330 aa19.49■□□□□ 0.71
GGA3-203ENST00000577435 SEPT12Q8IYM1 358 aa19.49■□□□□ 0.71
GGA3-203ENST00000577435 HSPA5P11021 654 aaKnown RBP19.48■□□□□ 0.71
GGA3-203ENST00000577435 EVA1CP58658 441 aa19.48■□□□□ 0.71
GGA3-203ENST00000577435 ZRANB1Q9UGI0 708 aa19.48■□□□□ 0.71
GGA3-203ENST00000577435 SPATA31A1Q5TZJ5 1347 aa19.48■□□□□ 0.71
GGA3-203ENST00000577435 COL18A1P39060 1754 aa19.47■□□□□ 0.71
GGA3-203ENST00000577435 STRN4Q9NRL3 753 aa19.46■□□□□ 0.71
GGA3-203ENST00000577435 BRWD3Q6RI45 1802 aa19.46■□□□□ 0.71
GGA3-203ENST00000577435 NFAT5O94916 1531 aa19.46■□□□□ 0.71
GGA3-203ENST00000577435 EP400Q96L91 3159 aa19.45■□□□□ 0.7
GGA3-203ENST00000577435 FAM98CQ17RN3 349 aaKnown RBP19.45■□□□□ 0.7
GGA3-203ENST00000577435 OVOS2A0A0J9YW53 1432 aa19.43■□□□□ 0.7
GGA3-203ENST00000577435 OVOS2Q6IE36 1432 aa19.43■□□□□ 0.7
GGA3-203ENST00000577435 COL5A2P05997 1499 aaPredicted RBP19.43■□□□□ 0.7
GGA3-203ENST00000577435 LARP1Q6PKG0 1096 aaKnown RBP19.43■□□□□ 0.7
GGA3-203ENST00000577435 BARGINQ6ZT62 677 aa19.43■□□□□ 0.7
GGA3-203ENST00000577435 AXIN2Q9Y2T1 843 aa19.43■□□□□ 0.7
GGA3-203ENST00000577435 THRAP3Q9Y2W1 955 aaKnown RBP19.42■□□□□ 0.7
GGA3-203ENST00000577435 ZBTB7CA1YPR0 619 aa19.41■□□□□ 0.7
GGA3-203ENST00000577435 SOX12O15370 315 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms