RNA–Protein interactions for RNA: ENST00000576957.1

ATP2A3-215, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 1,159 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-215ENST00000576957 KRT27Q7Z3Y8 459 aa19.2■□□□□ 0.66
ATP2A3-215ENST00000576957 COL14A1Q05707 1796 aaKnown RBP19.19■□□□□ 0.66
ATP2A3-215ENST00000576957 BTG4Q9NY30 223 aa19.19■□□□□ 0.66
ATP2A3-215ENST00000576957 ITSN1Q15811 1721 aa19.18■□□□□ 0.66
ATP2A3-215ENST00000576957 NRAPQ86VF7 1730 aa19.18■□□□□ 0.66
ATP2A3-215ENST00000576957 NUDT16Q96DE0 195 aaKnown RBP19.18■□□□□ 0.66
ATP2A3-215ENST00000576957 ATP7BP35670 1465 aa19.17■□□□□ 0.66
ATP2A3-215ENST00000576957 PAK3O75914 559 aaPredicted RBP19.17■□□□□ 0.66
ATP2A3-215ENST00000576957 SRCAPQ6ZRS2 3230 aa19.17■□□□□ 0.66
ATP2A3-215ENST00000576957 KIAA1210Q9ULL0 1709 aa19.16■□□□□ 0.66
ATP2A3-215ENST00000576957 CRYBG1Q9Y4K1 1723 aa19.15■□□□□ 0.66
ATP2A3-215ENST00000576957 FAM98CQ17RN3 349 aaKnown RBP19.14■□□□□ 0.65
ATP2A3-215ENST00000576957 CDK19Q9BWU1 502 aa19.14■□□□□ 0.65
ATP2A3-215ENST00000576957 A0A0G2JS52 829 aa19.13■□□□□ 0.65
ATP2A3-215ENST00000576957 MYT1Q01538 1121 aa19.13■□□□□ 0.65
ATP2A3-215ENST00000576957 DEFB132Q7Z7B7 95 aa19.13■□□□□ 0.65
ATP2A3-215ENST00000576957 PRDM11Q9NQV5 511 aa19.13■□□□□ 0.65
ATP2A3-215ENST00000576957 CCDC61Q9Y6R9 512 aa19.13■□□□□ 0.65
ATP2A3-215ENST00000576957 SPATA31A5Q5VU36 1347 aa19.13■□□□□ 0.65
ATP2A3-215ENST00000576957 SPATA31A7Q8IWB4 1347 aa19.13■□□□□ 0.65
ATP2A3-215ENST00000576957 POLR3AO14802 1390 aaPredicted RBP19.13■□□□□ 0.65
ATP2A3-215ENST00000576957 PLEKHG3A1L390 1219 aa19.11■□□□□ 0.65
ATP2A3-215ENST00000576957 ACEP12821 1306 aa19.09■□□□□ 0.65
ATP2A3-215ENST00000576957 TOPAZ1Q8N9V7 1692 aa19.09■□□□□ 0.65
ATP2A3-215ENST00000576957 BAG6P46379 1132 aa19.09■□□□□ 0.65
ATP2A3-215ENST00000576957 NBPF8Q3BBV2 869 aa19.09■□□□□ 0.65
ATP2A3-215ENST00000576957 KIAA0232Q92628 1395 aa19.08■□□□□ 0.65
ATP2A3-215ENST00000576957 NBPF1Q3BBV0 1214 aa19.07■□□□□ 0.64
ATP2A3-215ENST00000576957 PHRF1Q9P1Y6 1649 aaKnown RBP19.07■□□□□ 0.64
ATP2A3-215ENST00000576957 THSD7AQ9UPZ6 1657 aa19.06■□□□□ 0.64
ATP2A3-215ENST00000576957 SPATA31A1Q5TZJ5 1347 aa19.05■□□□□ 0.64
ATP2A3-215ENST00000576957 CENPJQ9HC77 1338 aaPredicted RBP19.04■□□□□ 0.64
ATP2A3-215ENST00000576957 ZC3H6P61129 1189 aaKnown RBP19.04■□□□□ 0.64
ATP2A3-215ENST00000576957 CHRNA2Q15822 529 aa19.04■□□□□ 0.64
ATP2A3-215ENST00000576957 ABTB2Q8N961 1025 aa19.04■□□□□ 0.64
ATP2A3-215ENST00000576957 RGPD1P0DJD0 1748 aa19.03■□□□□ 0.64
ATP2A3-215ENST00000576957 NUTM2GQ5VZR2 741 aa19.03■□□□□ 0.64
ATP2A3-215ENST00000576957 BRD4O60885 1362 aaPredicted RBP19.03■□□□□ 0.64
ATP2A3-215ENST00000576957 SRPK2P78362 688 aaKnown RBP19.02■□□□□ 0.64
ATP2A3-215ENST00000576957 STRN4Q9NRL3 753 aa19.02■□□□□ 0.64
ATP2A3-215ENST00000576957 CPDO75976 1380 aa19.02■□□□□ 0.64
ATP2A3-215ENST00000576957 USP19O94966 1318 aa19.01■□□□□ 0.63
ATP2A3-215ENST00000576957 NLRP13Q86W25 1043 aa19.01■□□□□ 0.63
ATP2A3-215ENST00000576957 DISP2A7MBM2 1401 aa19■□□□□ 0.63
ATP2A3-215ENST00000576957 PPIP5K1Q6PFW1 1433 aa19■□□□□ 0.63
ATP2A3-215ENST00000576957 EVA1CP58658 441 aa19■□□□□ 0.63
ATP2A3-215ENST00000576957 FAM182BQ5T319 152 aa19■□□□□ 0.63
ATP2A3-215ENST00000576957 BARGINQ6ZT62 677 aa19■□□□□ 0.63
ATP2A3-215ENST00000576957 NRKQ7Z2Y5 1582 aa18.99■□□□□ 0.63
ATP2A3-215ENST00000576957 FAM196AQ6ZSG2 479 aa18.99■□□□□ 0.63
ATP2A3-215ENST00000576957 SSH2Q76I76 1423 aa18.99■□□□□ 0.63
ATP2A3-215ENST00000576957 EN1Q05925 392 aaPredicted RBP18.98■□□□□ 0.63
ATP2A3-215ENST00000576957 CCER1Q8TC90 406 aaPredicted RBP18.98■□□□□ 0.63
ATP2A3-215ENST00000576957 CABP2Q9NPB3 220 aa18.98■□□□□ 0.63
ATP2A3-215ENST00000576957 LRP5O75197 1615 aa18.97■□□□□ 0.63
ATP2A3-215ENST00000576957 GCP02774 474 aa18.97■□□□□ 0.63
ATP2A3-215ENST00000576957 CAMTA1Q9Y6Y1 1673 aa18.97■□□□□ 0.63
ATP2A3-215ENST00000576957 LMO7Q8WWI1 1683 aa18.96■□□□□ 0.63
ATP2A3-215ENST00000576957 QRICH2Q9H0J4 1663 aa18.96■□□□□ 0.63
ATP2A3-215ENST00000576957 L3MBTL2Q969R5 705 aa18.96■□□□□ 0.63
ATP2A3-215ENST00000576957 THRAP3Q9Y2W1 955 aaKnown RBP18.96■□□□□ 0.63
ATP2A3-215ENST00000576957 TNS1Q9HBL0 1735 aaKnown RBP18.95■□□□□ 0.62
ATP2A3-215ENST00000576957 TCP11L2Q8N4U5 519 aa18.95■□□□□ 0.62
ATP2A3-215ENST00000576957 USP35Q9P2H5 1018 aa18.95■□□□□ 0.62
ATP2A3-215ENST00000576957 PDE3BQ13370 1112 aa18.94■□□□□ 0.62
ATP2A3-215ENST00000576957 LARP1Q6PKG0 1096 aaKnown RBP18.94■□□□□ 0.62
ATP2A3-215ENST00000576957 CABP1Q9NZU7 370 aa18.94■□□□□ 0.62
ATP2A3-215ENST00000576957 USP6P35125 1406 aa18.93■□□□□ 0.62
ATP2A3-215ENST00000576957 PSDA5PKW4 1024 aaPredicted RBP18.93■□□□□ 0.62
ATP2A3-215ENST00000576957 TRIM37O94972 964 aa18.93■□□□□ 0.62
ATP2A3-215ENST00000576957 EVC2Q86UK5 1308 aa18.93■□□□□ 0.62
ATP2A3-215ENST00000576957 PARD3Q8TEW0 1356 aa18.93■□□□□ 0.62
ATP2A3-215ENST00000576957 CAMKK2Q96RR4 588 aa18.92■□□□□ 0.62
ATP2A3-215ENST00000576957 NLRP6P59044 892 aa18.91■□□□□ 0.62
ATP2A3-215ENST00000576957 EZH2Q15910 746 aaKnown RBP18.91■□□□□ 0.62
ATP2A3-215ENST00000576957 COL5A2P05997 1499 aaPredicted RBP18.9■□□□□ 0.62
ATP2A3-215ENST00000576957 TRPM1Q7Z4N2 1603 aa18.9■□□□□ 0.62
ATP2A3-215ENST00000576957 C11orf95C9JLR9 678 aaPredicted RBP18.9■□□□□ 0.62
ATP2A3-215ENST00000576957 PELP1Q8IZL8 1130 aaKnown RBP18.9■□□□□ 0.62
ATP2A3-215ENST00000576957 AATKQ6ZMQ8 1374 aa18.9■□□□□ 0.62
ATP2A3-215ENST00000576957 SLIT3O75094 1523 aa18.9■□□□□ 0.62
ATP2A3-215ENST00000576957 APBA3O96018 575 aa18.89■□□□□ 0.61
ATP2A3-215ENST00000576957 ZNF692Q9BU19 519 aaPredicted RBP18.89■□□□□ 0.61
ATP2A3-215ENST00000576957 CRB1P82279 1406 aa18.89■□□□□ 0.61
ATP2A3-215ENST00000576957 R3HDM1Q15032 1099 aaKnown RBP18.88■□□□□ 0.61
ATP2A3-215ENST00000576957 SIN3AQ96ST3 1273 aa18.88■□□□□ 0.61
ATP2A3-215ENST00000576957 ROCK2O75116 1388 aaKnown RBP18.87■□□□□ 0.61
ATP2A3-215ENST00000576957 PARP4Q9UKK3 1724 aaKnown RBP18.87■□□□□ 0.61
ATP2A3-215ENST00000576957 NEUROD1Q13562 356 aa18.84■□□□□ 0.61
ATP2A3-215ENST00000576957 KCNH5Q8NCM2 988 aa18.84■□□□□ 0.61
ATP2A3-215ENST00000576957 PIK3C2AO00443 1686 aa18.84■□□□□ 0.61
ATP2A3-215ENST00000576957 TTC21BQ7Z4L5 1316 aa18.83■□□□□ 0.61
ATP2A3-215ENST00000576957 TTC21AQ8NDW8 1320 aa18.83■□□□□ 0.61
ATP2A3-215ENST00000576957 ZBTB7CA1YPR0 619 aa18.83■□□□□ 0.6
ATP2A3-215ENST00000576957 COL18A1P39060 1754 aa18.82■□□□□ 0.6
ATP2A3-215ENST00000576957 RREB1Q92766 1687 aa18.82■□□□□ 0.6
ATP2A3-215ENST00000576957 AKAP12Q02952 1782 aa18.81■□□□□ 0.6
ATP2A3-215ENST00000576957 NBPF14Q5TI25 921 aa18.81■□□□□ 0.6
ATP2A3-215ENST00000576957 TOM1L2Q6ZVM7 507 aa18.81■□□□□ 0.6
ATP2A3-215ENST00000576957 ARHGEF25Q86VW2 580 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms