RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.1■□□□□ 0.33
LITAF-219ENST00000576334 UNC5CLQ8IV45 518 aa17.1■□□□□ 0.33
LITAF-219ENST00000576334 GJD4Q96KN9 370 aaPredicted RBP17.1■□□□□ 0.33
LITAF-219ENST00000576334 ACEP12821 1306 aa17.1■□□□□ 0.33
LITAF-219ENST00000576334 CRYBG1Q9Y4K1 1723 aa17.1■□□□□ 0.33
LITAF-219ENST00000576334 SRPK2P78362 688 aaKnown RBP17.09■□□□□ 0.33
LITAF-219ENST00000576334 CCDC61Q9Y6R9 512 aa17.09■□□□□ 0.33
LITAF-219ENST00000576334 RALGAPBQ86X10 1494 aa17.08■□□□□ 0.32
LITAF-219ENST00000576334 ROCK2O75116 1388 aaKnown RBP17.08■□□□□ 0.32
LITAF-219ENST00000576334 PPIP5K1Q6PFW1 1433 aa17.06■□□□□ 0.32
LITAF-219ENST00000576334 POLR3AO14802 1390 aaPredicted RBP17.06■□□□□ 0.32
LITAF-219ENST00000576334 PLEKHG3A1L390 1219 aa17.06■□□□□ 0.32
LITAF-219ENST00000576334 NWD2Q9ULI1 1742 aa17.04■□□□□ 0.32
LITAF-219ENST00000576334 BTG4Q9NY30 223 aa17.04■□□□□ 0.32
LITAF-219ENST00000576334 CCDC9Q9Y3X0 531 aaKnown RBP17.04■□□□□ 0.32
LITAF-219ENST00000576334 BRWD3Q6RI45 1802 aa17.04■□□□□ 0.32
LITAF-219ENST00000576334 NRAPQ86VF7 1730 aa17.04■□□□□ 0.32
LITAF-219ENST00000576334 PHRF1Q9P1Y6 1649 aaKnown RBP17.03■□□□□ 0.32
LITAF-219ENST00000576334 CABP1Q9NZU7 370 aa17.03■□□□□ 0.32
LITAF-219ENST00000576334 ZC3H6P61129 1189 aaKnown RBP17.02■□□□□ 0.32
LITAF-219ENST00000576334 CHRNA2Q15822 529 aa17.02■□□□□ 0.32
LITAF-219ENST00000576334 VPS72Q15906 364 aa17.02■□□□□ 0.32
LITAF-219ENST00000576334 COL14A1Q05707 1796 aaKnown RBP17.02■□□□□ 0.31
LITAF-219ENST00000576334 TONSLQ96HA7 1378 aa17.02■□□□□ 0.31
LITAF-219ENST00000576334 ATAD2Q6PL18 1390 aa17.01■□□□□ 0.31
LITAF-219ENST00000576334 KIAA0232Q92628 1395 aa17.01■□□□□ 0.31
LITAF-219ENST00000576334 ABTB2Q8N961 1025 aa17■□□□□ 0.31
LITAF-219ENST00000576334 SEPT12Q8IYM1 358 aa16.99■□□□□ 0.31
LITAF-219ENST00000576334 PRDM11Q9NQV5 511 aa16.99■□□□□ 0.31
LITAF-219ENST00000576334 EVC2Q86UK5 1308 aa16.98■□□□□ 0.31
LITAF-219ENST00000576334 CARD11Q9BXL7 1154 aa16.98■□□□□ 0.31
LITAF-219ENST00000576334 FAM98CQ17RN3 349 aaKnown RBP16.97■□□□□ 0.31
LITAF-219ENST00000576334 NRKQ7Z2Y5 1582 aa16.97■□□□□ 0.31
LITAF-219ENST00000576334 USP6P35125 1406 aa16.96■□□□□ 0.3
LITAF-219ENST00000576334 STRN4Q9NRL3 753 aa16.95■□□□□ 0.3
LITAF-219ENST00000576334 A0A0G2JS52 829 aa16.94■□□□□ 0.3
LITAF-219ENST00000576334 ONECUT3O60422 494 aaPredicted RBP16.94■□□□□ 0.3
LITAF-219ENST00000576334 MYT1Q01538 1121 aa16.94■□□□□ 0.3
LITAF-219ENST00000576334 USP19O94966 1318 aa16.94■□□□□ 0.3
LITAF-219ENST00000576334 FAM182BQ5T319 152 aa16.93■□□□□ 0.3
LITAF-219ENST00000576334 PIK3C2AO00443 1686 aa16.93■□□□□ 0.3
LITAF-219ENST00000576334 SSH2Q76I76 1423 aa16.93■□□□□ 0.3
LITAF-219ENST00000576334 SPATA31A5Q5VU36 1347 aa16.93■□□□□ 0.3
LITAF-219ENST00000576334 SPATA31A7Q8IWB4 1347 aa16.93■□□□□ 0.3
LITAF-219ENST00000576334 CAMTA1Q9Y6Y1 1673 aa16.92■□□□□ 0.3
LITAF-219ENST00000576334 ZBTB7CA1YPR0 619 aa16.92■□□□□ 0.3
LITAF-219ENST00000576334 NLRP6P59044 892 aa16.92■□□□□ 0.3
LITAF-219ENST00000576334 AKAP12Q02952 1782 aa16.92■□□□□ 0.3
LITAF-219ENST00000576334 GCP02774 474 aa16.91■□□□□ 0.3
LITAF-219ENST00000576334 KRT27Q7Z3Y8 459 aa16.91■□□□□ 0.3
LITAF-219ENST00000576334 NLRP13Q86W25 1043 aa16.91■□□□□ 0.3
LITAF-219ENST00000576334 USP35Q9P2H5 1018 aa16.91■□□□□ 0.3
LITAF-219ENST00000576334 LMO7Q8WWI1 1683 aa16.9■□□□□ 0.3
LITAF-219ENST00000576334 PCGF6Q9BYE7 350 aa16.89■□□□□ 0.29
LITAF-219ENST00000576334 ZRANB1Q9UGI0 708 aa16.89■□□□□ 0.29
LITAF-219ENST00000576334 SPATA31A1Q5TZJ5 1347 aa16.89■□□□□ 0.29
LITAF-219ENST00000576334 TTC21BQ7Z4L5 1316 aa16.89■□□□□ 0.29
LITAF-219ENST00000576334 CPSF1Q10570 1443 aaKnown RBP16.88■□□□□ 0.29
LITAF-219ENST00000576334 SOX12O15370 315 aa16.88■□□□□ 0.29
LITAF-219ENST00000576334 LARP1Q6PKG0 1096 aaKnown RBP16.88■□□□□ 0.29
LITAF-219ENST00000576334 DEFB132Q7Z7B7 95 aa16.88■□□□□ 0.29
LITAF-219ENST00000576334 SBNO2Q9Y2G9 1366 aa16.88■□□□□ 0.29
LITAF-219ENST00000576334 THSD7AQ9UPZ6 1657 aa16.88■□□□□ 0.29
LITAF-219ENST00000576334 SRCAPQ6ZRS2 3230 aa16.87■□□□□ 0.29
LITAF-219ENST00000576334 SLIT3O75094 1523 aa16.87■□□□□ 0.29
LITAF-219ENST00000576334 ST20-MTHFSA0A0A6YYL1 179 aa16.87■□□□□ 0.29
LITAF-219ENST00000576334 EVA1CP58658 441 aa16.87■□□□□ 0.29
LITAF-219ENST00000576334 CPDO75976 1380 aa16.87■□□□□ 0.29
LITAF-219ENST00000576334 CD163L1Q9NR16 1453 aa16.86■□□□□ 0.29
LITAF-219ENST00000576334 TMC1Q8TDI8 760 aa16.86■□□□□ 0.29
LITAF-219ENST00000576334 SLC12A5Q9H2X9 1139 aa16.86■□□□□ 0.29
LITAF-219ENST00000576334 BRD4O60885 1362 aaPredicted RBP16.86■□□□□ 0.29
LITAF-219ENST00000576334 KTN1Q86UP2 1357 aaKnown RBP16.86■□□□□ 0.29
LITAF-219ENST00000576334 MON2Q7Z3U7 1717 aa16.85■□□□□ 0.29
LITAF-219ENST00000576334 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.85■□□□□ 0.29
LITAF-219ENST00000576334 TESK2Q96S53 571 aa16.85■□□□□ 0.29
LITAF-219ENST00000576334 BLMP54132 1417 aaPredicted RBP16.85■□□□□ 0.29
LITAF-219ENST00000576334 ZNF692Q9BU19 519 aaPredicted RBP16.84■□□□□ 0.29
LITAF-219ENST00000576334 AXIN2Q9Y2T1 843 aa16.84■□□□□ 0.29
LITAF-219ENST00000576334 COL5A2P05997 1499 aaPredicted RBP16.84■□□□□ 0.29
LITAF-219ENST00000576334 COL18A1P39060 1754 aa16.84■□□□□ 0.29
LITAF-219ENST00000576334 CCDC125Q86Z20 511 aa16.83■□□□□ 0.28
LITAF-219ENST00000576334 RGPD5Q99666 1765 aa16.83■□□□□ 0.28
LITAF-219ENST00000576334 NME9Q86XW9 330 aa16.82■□□□□ 0.28
LITAF-219ENST00000576334 TTC21AQ8NDW8 1320 aa16.8■□□□□ 0.28
LITAF-219ENST00000576334 A0A1W2PP64 1363 aa16.79■□□□□ 0.28
LITAF-219ENST00000576334 AATKQ6ZMQ8 1374 aa16.79■□□□□ 0.28
LITAF-219ENST00000576334 ARHGEF25Q86VW2 580 aa16.79■□□□□ 0.28
LITAF-219ENST00000576334 NFAT5O94916 1531 aa16.79■□□□□ 0.28
LITAF-219ENST00000576334 BARGINQ6ZT62 677 aa16.78■□□□□ 0.28
LITAF-219ENST00000576334 TCP11L2Q8N4U5 519 aa16.78■□□□□ 0.28
LITAF-219ENST00000576334 USP47Q96K76 1375 aa16.77■□□□□ 0.28
LITAF-219ENST00000576334 SF3B2Q13435 895 aaKnown RBP16.77■□□□□ 0.28
LITAF-219ENST00000576334 HDGFL2Q7Z4V5 671 aaPredicted RBP16.77■□□□□ 0.28
LITAF-219ENST00000576334 CRB1P82279 1406 aa16.76■□□□□ 0.27
LITAF-219ENST00000576334 TNS1Q9HBL0 1735 aaKnown RBP16.76■□□□□ 0.27
LITAF-219ENST00000576334 TRIM37O94972 964 aa16.75■□□□□ 0.27
LITAF-219ENST00000576334 EN1Q05925 392 aaPredicted RBP16.75■□□□□ 0.27
LITAF-219ENST00000576334 TOM1L2Q6ZVM7 507 aa16.75■□□□□ 0.27
LITAF-219ENST00000576334 KCNH5Q8NCM2 988 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms