RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 PIK3C2GO75747 1445 aa8.89□□□□□ -0.99
SMG6-219ENST00000575663 SPATA31A1Q5TZJ5 1347 aa8.89□□□□□ -0.99
SMG6-219ENST00000575663 RREB1Q92766 1687 aa8.89□□□□□ -0.99
SMG6-219ENST00000575663 IFT172Q9UG01 1749 aa8.88□□□□□ -0.99
SMG6-219ENST00000575663 EIF3AQ14152 1382 aaKnown RBP8.88□□□□□ -0.99
SMG6-219ENST00000575663 PDE3BQ13370 1112 aa8.88□□□□□ -0.99
SMG6-219ENST00000575663 TMEM132EQ6IEE7 984 aa8.88□□□□□ -0.99
SMG6-219ENST00000575663 ZNF784Q8NCA9 323 aaPredicted RBP8.88□□□□□ -0.99
SMG6-219ENST00000575663 PMFBP1Q8TBY8 1022 aa8.88□□□□□ -0.99
SMG6-219ENST00000575663 SIRT1Q96EB6 747 aa8.88□□□□□ -0.99
SMG6-219ENST00000575663 SLC4A1APQ9BWU0 796 aaKnown RBP8.88□□□□□ -0.99
SMG6-219ENST00000575663 NUP188Q5SRE5 1749 aa8.87□□□□□ -0.99
SMG6-219ENST00000575663 DHX57Q6P158 1386 aaKnown RBP8.86□□□□□ -0.99
SMG6-219ENST00000575663 C11orf95C9JLR9 678 aaPredicted RBP8.86□□□□□ -0.99
SMG6-219ENST00000575663 STRN4Q9NRL3 753 aa8.86□□□□□ -0.99
SMG6-219ENST00000575663 ACIN1Q9UKV3 1341 aaKnown RBP8.85□□□□□ -0.99
SMG6-219ENST00000575663 C1QTNF8P60827 252 aa8.85□□□□□ -0.99
SMG6-219ENST00000575663 SAFB2Q14151 953 aaKnown RBP eCLIP8.85□□□□□ -0.99
SMG6-219ENST00000575663 RGL3Q3MIN7 710 aa8.85□□□□□ -0.99
SMG6-219ENST00000575663 BARGINQ6ZT62 677 aa8.85□□□□□ -0.99
SMG6-219ENST00000575663 PRAM1Q96QH2 718 aa8.85□□□□□ -0.99
SMG6-219ENST00000575663 USP35Q9P2H5 1018 aa8.85□□□□□ -0.99
SMG6-219ENST00000575663 KIAA0232Q92628 1395 aa8.85□□□□□ -0.99
SMG6-219ENST00000575663 ALS2Q96Q42 1657 aa8.85□□□□□ -0.99
SMG6-219ENST00000575663 UTRNP46939 3433 aa8.84□□□□□ -0.99
SMG6-219ENST00000575663 PAK3O75914 559 aaPredicted RBP8.84□□□□□ -0.99
SMG6-219ENST00000575663 SPATA31E1Q6ZUB1 1445 aa8.84□□□□□ -0.99
SMG6-219ENST00000575663 NRKQ7Z2Y5 1582 aa8.84□□□□□ -0.99
SMG6-219ENST00000575663 TRPM3Q9HCF6 1732 aaPredicted RBP8.84□□□□□ -0.99
SMG6-219ENST00000575663 POGKQ9P215 609 aa8.84□□□□□ -0.99
SMG6-219ENST00000575663 SSH2Q76I76 1423 aa8.83□□□□□ -1
SMG6-219ENST00000575663 EVA1CP58658 441 aa8.83□□□□□ -1
SMG6-219ENST00000575663 NGDNQ8NEJ9 315 aaKnown RBP8.83□□□□□ -1
SMG6-219ENST00000575663 CAMTA1Q9Y6Y1 1673 aa8.83□□□□□ -1
SMG6-219ENST00000575663 DLC1Q96QB1 1528 aa8.83□□□□□ -1
SMG6-219ENST00000575663 TULP4Q9NRJ4 1543 aa8.83□□□□□ -1
SMG6-219ENST00000575663 ATP7BP35670 1465 aa8.83□□□□□ -1
SMG6-219ENST00000575663 OVOS2A0A0G2JMS6 1433 aa8.82□□□□□ -1
SMG6-219ENST00000575663 OVOS2A0A0J9YW53 1432 aa8.82□□□□□ -1
SMG6-219ENST00000575663 OVOS2Q6IE36 1432 aa8.82□□□□□ -1
SMG6-219ENST00000575663 CHRNA2Q15822 529 aa8.82□□□□□ -1
SMG6-219ENST00000575663 TCP11L2Q8N4U5 519 aa8.82□□□□□ -1
SMG6-219ENST00000575663 THRAP3Q9Y2W1 955 aaKnown RBP8.82□□□□□ -1
SMG6-219ENST00000575663 GIGYF1O75420 1035 aaPredicted RBP8.81□□□□□ -1
SMG6-219ENST00000575663 C14orf93Q9H972 538 aaKnown RBP8.81□□□□□ -1
SMG6-219ENST00000575663 RGPD8O14715 1765 aaPredicted RBP8.81□□□□□ -1
SMG6-219ENST00000575663 CRYBG1Q9Y4K1 1723 aa8.8□□□□□ -1
SMG6-219ENST00000575663 PLSCR1O15162 318 aa8.8□□□□□ -1
SMG6-219ENST00000575663 ZC3H6P61129 1189 aaKnown RBP8.8□□□□□ -1
SMG6-219ENST00000575663 BCL11BQ9C0K0 894 aaPredicted RBP8.8□□□□□ -1
SMG6-219ENST00000575663 RGPD3A6NKT7 1758 aaPredicted RBP8.8□□□□□ -1
SMG6-219ENST00000575663 RGPD4Q7Z3J3 1758 aa8.8□□□□□ -1
SMG6-219ENST00000575663 PHRF1Q9P1Y6 1649 aaKnown RBP8.8□□□□□ -1
SMG6-219ENST00000575663 ZBTB7AO95365 584 aa8.79□□□□□ -1
SMG6-219ENST00000575663 CFAP70Q5T0N1 1121 aa8.79□□□□□ -1
SMG6-219ENST00000575663 HIRIP3Q9BW71 556 aaPredicted RBP8.79□□□□□ -1
SMG6-219ENST00000575663 ANO8Q9HCE9 1232 aaPredicted RBP8.79□□□□□ -1
SMG6-219ENST00000575663 PRR36Q9H6K5 1346 aa8.79□□□□□ -1
SMG6-219ENST00000575663 CASZ1Q86V15 1759 aa8.78□□□□□ -1
SMG6-219ENST00000575663 MYOM1P52179 1685 aa8.78□□□□□ -1
SMG6-219ENST00000575663 LARP1Q6PKG0 1096 aaKnown RBP8.78□□□□□ -1
SMG6-219ENST00000575663 SYT17Q9BSW7 474 aa8.78□□□□□ -1
SMG6-219ENST00000575663 FHDC1Q9C0D6 1143 aaPredicted RBP8.78□□□□□ -1
SMG6-219ENST00000575663 STK32BQ9NY57 414 aa8.78□□□□□ -1
SMG6-219ENST00000575663 MINK1Q8N4C8 1332 aaPredicted RBP8.78□□□□□ -1
SMG6-219ENST00000575663 CPDO75976 1380 aa8.77□□□□□ -1.01
SMG6-219ENST00000575663 WASLO00401 505 aaPredicted RBP8.77□□□□□ -1.01
SMG6-219ENST00000575663 PTGER2P43116 358 aa8.77□□□□□ -1.01
SMG6-219ENST00000575663 MTFR1LQ9H019 292 aa8.77□□□□□ -1.01
SMG6-219ENST00000575663 ATF5Q9Y2D1 282 aaPredicted RBP8.76□□□□□ -1.01
SMG6-219ENST00000575663 CRB1P82279 1406 aa8.76□□□□□ -1.01
SMG6-219ENST00000575663 PARP4Q9UKK3 1724 aaKnown RBP8.76□□□□□ -1.01
SMG6-219ENST00000575663 COL5A2P05997 1499 aaPredicted RBP8.76□□□□□ -1.01
SMG6-219ENST00000575663 DDB1Q16531 1140 aa8.75□□□□□ -1.01
SMG6-219ENST00000575663 NUTM2GQ5VZR2 741 aa8.75□□□□□ -1.01
SMG6-219ENST00000575663 TRAK1Q9UPV9 953 aa8.75□□□□□ -1.01
SMG6-219ENST00000575663 LMO7Q8WWI1 1683 aa8.75□□□□□ -1.01
SMG6-219ENST00000575663 MAP3K5Q99683 1374 aa8.74□□□□□ -1.01
SMG6-219ENST00000575663 ADGRB1O14514 1584 aa8.74□□□□□ -1.01
SMG6-219ENST00000575663 SLC15A2Q16348 729 aa8.74□□□□□ -1.01
SMG6-219ENST00000575663 GPR162Q16538 588 aa8.74□□□□□ -1.01
SMG6-219ENST00000575663 PDGFDQ9GZP0 370 aaPredicted RBP8.74□□□□□ -1.01
SMG6-219ENST00000575663 USP19O94966 1318 aa8.74□□□□□ -1.01
SMG6-219ENST00000575663 ITSN1Q15811 1721 aa8.74□□□□□ -1.01
SMG6-219ENST00000575663 LRRC37A3O60309 1634 aa8.73□□□□□ -1.01
SMG6-219ENST00000575663 BCL9O00512 1426 aa8.73□□□□□ -1.01
SMG6-219ENST00000575663 PPARGC1BQ86YN6 1023 aaKnown RBP8.73□□□□□ -1.01
SMG6-219ENST00000575663 ABTB2Q8N961 1025 aa8.73□□□□□ -1.01
SMG6-219ENST00000575663 ARXQ96QS3 562 aa8.73□□□□□ -1.01
SMG6-219ENST00000575663 PEAK1Q9H792 1746 aa8.73□□□□□ -1.01
SMG6-219ENST00000575663 POLR3AO14802 1390 aaPredicted RBP8.73□□□□□ -1.01
SMG6-219ENST00000575663 AATKQ6ZMQ8 1374 aa8.73□□□□□ -1.01
SMG6-219ENST00000575663 TXNRD1Q16881 649 aa8.72□□□□□ -1.01
SMG6-219ENST00000575663 NLRP13Q86W25 1043 aa8.72□□□□□ -1.01
SMG6-219ENST00000575663 NUDT16Q96DE0 195 aaKnown RBP8.72□□□□□ -1.01
SMG6-219ENST00000575663 MPHOSPH9Q99550 1183 aa8.72□□□□□ -1.01
SMG6-219ENST00000575663 CDCA7Q9BWT1 371 aaPredicted RBP8.72□□□□□ -1.01
SMG6-219ENST00000575663 TOM1L2Q6ZVM7 507 aa8.71□□□□□ -1.02
SMG6-219ENST00000575663 SGIP1Q9BQI5 828 aa8.71□□□□□ -1.02
SMG6-219ENST00000575663 ZBTB7CA1YPR0 619 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms