RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 KIAA1210Q9ULL0 1709 aa23.64■■□□□ 1.37
TMEM88-202ENST00000574668 ROCK2O75116 1388 aaKnown RBP23.64■■□□□ 1.37
TMEM88-202ENST00000574668 ONECUT3O60422 494 aaPredicted RBP23.63■■□□□ 1.37
TMEM88-202ENST00000574668 TRPM3Q9HCF6 1732 aaPredicted RBP23.63■■□□□ 1.37
TMEM88-202ENST00000574668 KRT27Q7Z3Y8 459 aa23.62■■□□□ 1.37
TMEM88-202ENST00000574668 BTG4Q9NY30 223 aa23.6■■□□□ 1.37
TMEM88-202ENST00000574668 TULP4Q9NRJ4 1543 aa23.59■■□□□ 1.37
TMEM88-202ENST00000574668 NRAPQ86VF7 1730 aa23.59■■□□□ 1.37
TMEM88-202ENST00000574668 A0A0G2JS52 829 aa23.59■■□□□ 1.37
TMEM88-202ENST00000574668 WASLO00401 505 aaPredicted RBP23.59■■□□□ 1.37
TMEM88-202ENST00000574668 MYT1Q01538 1121 aa23.59■■□□□ 1.37
TMEM88-202ENST00000574668 SF3B2Q13435 895 aaKnown RBP23.59■■□□□ 1.37
TMEM88-202ENST00000574668 GPRASP1Q5JY77 1395 aa23.59■■□□□ 1.37
TMEM88-202ENST00000574668 ALS2Q96Q42 1657 aa23.59■■□□□ 1.37
TMEM88-202ENST00000574668 TRPM1Q7Z4N2 1603 aa23.59■■□□□ 1.37
TMEM88-202ENST00000574668 FAM98CQ17RN3 349 aaKnown RBP23.58■■□□□ 1.37
TMEM88-202ENST00000574668 CARD11Q9BXL7 1154 aa23.57■■□□□ 1.36
TMEM88-202ENST00000574668 EIF3AQ14152 1382 aaKnown RBP23.55■■□□□ 1.36
TMEM88-202ENST00000574668 PAK3O75914 559 aaPredicted RBP23.55■■□□□ 1.36
TMEM88-202ENST00000574668 NGDNQ8NEJ9 315 aaKnown RBP23.55■■□□□ 1.36
TMEM88-202ENST00000574668 COL14A1Q05707 1796 aaKnown RBP23.54■■□□□ 1.36
TMEM88-202ENST00000574668 FAM182BQ5T319 152 aa23.52■■□□□ 1.36
TMEM88-202ENST00000574668 CRYBG1Q9Y4K1 1723 aa23.51■■□□□ 1.35
TMEM88-202ENST00000574668 ARHGEF28Q8N1W1 1705 aaKnown RBP23.5■■□□□ 1.35
TMEM88-202ENST00000574668 ATP7BP35670 1465 aa23.49■■□□□ 1.35
TMEM88-202ENST00000574668 NUDT16Q96DE0 195 aaKnown RBP23.49■■□□□ 1.35
TMEM88-202ENST00000574668 SPATA31A5Q5VU36 1347 aa23.49■■□□□ 1.35
TMEM88-202ENST00000574668 SPATA31A7Q8IWB4 1347 aa23.49■■□□□ 1.35
TMEM88-202ENST00000574668 PRDM11Q9NQV5 511 aa23.48■■□□□ 1.35
TMEM88-202ENST00000574668 PSDA5PKW4 1024 aaPredicted RBP23.47■■□□□ 1.35
TMEM88-202ENST00000574668 CENPJQ9HC77 1338 aaPredicted RBP23.47■■□□□ 1.35
TMEM88-202ENST00000574668 BAG6P46379 1132 aa23.46■■□□□ 1.35
TMEM88-202ENST00000574668 CHRNA2Q15822 529 aa23.46■■□□□ 1.35
TMEM88-202ENST00000574668 NUTM2GQ5VZR2 741 aa23.46■■□□□ 1.35
TMEM88-202ENST00000574668 KIAA0232Q92628 1395 aa23.45■■□□□ 1.34
TMEM88-202ENST00000574668 EN1Q05925 392 aaPredicted RBP23.44■■□□□ 1.34
TMEM88-202ENST00000574668 CDK19Q9BWU1 502 aa23.44■■□□□ 1.34
TMEM88-202ENST00000574668 ITSN1Q15811 1721 aa23.43■■□□□ 1.34
TMEM88-202ENST00000574668 THSD7AQ9UPZ6 1657 aa23.43■■□□□ 1.34
TMEM88-202ENST00000574668 ZC3H6P61129 1189 aaKnown RBP23.42■■□□□ 1.34
TMEM88-202ENST00000574668 STRN4Q9NRL3 753 aa23.42■■□□□ 1.34
TMEM88-202ENST00000574668 PHRF1Q9P1Y6 1649 aaKnown RBP23.41■■□□□ 1.34
TMEM88-202ENST00000574668 SPATA31A1Q5TZJ5 1347 aa23.4■■□□□ 1.34
TMEM88-202ENST00000574668 ZEB1P37275 1124 aaPredicted RBP23.4■■□□□ 1.34
TMEM88-202ENST00000574668 ACEP12821 1306 aa23.39■■□□□ 1.34
TMEM88-202ENST00000574668 LRP5O75197 1615 aa23.39■■□□□ 1.33
TMEM88-202ENST00000574668 RGPD1P0DJD0 1748 aa23.39■■□□□ 1.33
TMEM88-202ENST00000574668 TOPAZ1Q8N9V7 1692 aa23.38■■□□□ 1.33
TMEM88-202ENST00000574668 POLR3AO14802 1390 aaPredicted RBP23.38■■□□□ 1.33
TMEM88-202ENST00000574668 USP47Q96K76 1375 aa23.38■■□□□ 1.33
TMEM88-202ENST00000574668 USP35Q9P2H5 1018 aa23.37■■□□□ 1.33
TMEM88-202ENST00000574668 CCDC61Q9Y6R9 512 aa23.36■■□□□ 1.33
TMEM88-202ENST00000574668 ST20-MTHFSA0A0A6YYL1 179 aa23.35■■□□□ 1.33
TMEM88-202ENST00000574668 TNS1Q9HBL0 1735 aaKnown RBP23.35■■□□□ 1.33
TMEM88-202ENST00000574668 PLEKHG3A1L390 1219 aa23.34■■□□□ 1.33
TMEM88-202ENST00000574668 EIF4G2P78344 907 aaKnown RBP eCLIP23.34■■□□□ 1.33
TMEM88-202ENST00000574668 R3HDM1Q15032 1099 aaKnown RBP23.34■■□□□ 1.33
TMEM88-202ENST00000574668 EZH2Q15910 746 aaKnown RBP23.34■■□□□ 1.33
TMEM88-202ENST00000574668 NRKQ7Z2Y5 1582 aa23.33■■□□□ 1.33
TMEM88-202ENST00000574668 TRIM37O94972 964 aa23.33■■□□□ 1.33
TMEM88-202ENST00000574668 DISP2A7MBM2 1401 aa23.33■■□□□ 1.32
TMEM88-202ENST00000574668 QRICH2Q9H0J4 1663 aa23.32■■□□□ 1.32
TMEM88-202ENST00000574668 ABTB2Q8N961 1025 aa23.32■■□□□ 1.32
TMEM88-202ENST00000574668 SSH2Q76I76 1423 aa23.32■■□□□ 1.32
TMEM88-202ENST00000574668 EVC2Q86UK5 1308 aa23.32■■□□□ 1.32
TMEM88-202ENST00000574668 EVA1CP58658 441 aa23.31■■□□□ 1.32
TMEM88-202ENST00000574668 LARP1Q6PKG0 1096 aaKnown RBP23.31■■□□□ 1.32
TMEM88-202ENST00000574668 CAMTA1Q9Y6Y1 1673 aa23.31■■□□□ 1.32
TMEM88-202ENST00000574668 SLC24A1O60721 1099 aa23.3■■□□□ 1.32
TMEM88-202ENST00000574668 SRPK2P78362 688 aaKnown RBP23.3■■□□□ 1.32
TMEM88-202ENST00000574668 FAM196AQ6ZSG2 479 aa23.3■■□□□ 1.32
TMEM88-202ENST00000574668 CAMKK2Q96RR4 588 aa23.29■■□□□ 1.32
TMEM88-202ENST00000574668 PPIP5K1Q6PFW1 1433 aa23.28■■□□□ 1.32
TMEM88-202ENST00000574668 HSPA5P11021 654 aaKnown RBP23.28■■□□□ 1.32
TMEM88-202ENST00000574668 CABP2Q9NPB3 220 aa23.28■■□□□ 1.32
TMEM88-202ENST00000574668 USP19O94966 1318 aa23.28■■□□□ 1.32
TMEM88-202ENST00000574668 SBNO2Q9Y2G9 1366 aa23.27■■□□□ 1.32
TMEM88-202ENST00000574668 BARGINQ6ZT62 677 aa23.27■■□□□ 1.32
TMEM88-202ENST00000574668 LMO7Q8WWI1 1683 aa23.26■■□□□ 1.31
TMEM88-202ENST00000574668 APBA3O96018 575 aa23.26■■□□□ 1.31
TMEM88-202ENST00000574668 CPDO75976 1380 aa23.26■■□□□ 1.31
TMEM88-202ENST00000574668 PDE3BQ13370 1112 aa23.25■■□□□ 1.31
TMEM88-202ENST00000574668 TESK2Q96S53 571 aa23.25■■□□□ 1.31
TMEM88-202ENST00000574668 GCP02774 474 aa23.24■■□□□ 1.31
TMEM88-202ENST00000574668 TMF1P82094 1093 aa23.24■■□□□ 1.31
TMEM88-202ENST00000574668 TCP11L2Q8N4U5 519 aa23.24■■□□□ 1.31
TMEM88-202ENST00000574668 NLRP13Q86W25 1043 aa23.23■■□□□ 1.31
TMEM88-202ENST00000574668 ZBTB7CA1YPR0 619 aa23.22■■□□□ 1.31
TMEM88-202ENST00000574668 COL5A2P05997 1499 aaPredicted RBP23.2■■□□□ 1.3
TMEM88-202ENST00000574668 CABP1Q9NZU7 370 aa23.2■■□□□ 1.3
TMEM88-202ENST00000574668 CDCA8Q53HL2 280 aa23.18■■□□□ 1.3
TMEM88-202ENST00000574668 USP6P35125 1406 aa23.17■■□□□ 1.3
TMEM88-202ENST00000574668 PARD3Q8TEW0 1356 aa23.17■■□□□ 1.3
TMEM88-202ENST00000574668 NLRP6P59044 892 aa23.17■■□□□ 1.3
TMEM88-202ENST00000574668 THRAP3Q9Y2W1 955 aaKnown RBP23.17■■□□□ 1.3
TMEM88-202ENST00000574668 RREB1Q92766 1687 aa23.16■■□□□ 1.3
TMEM88-202ENST00000574668 PUS7Q96PZ0 661 aaKnown RBP23.16■■□□□ 1.3
TMEM88-202ENST00000574668 NUP188Q5SRE5 1749 aa23.15■■□□□ 1.3
TMEM88-202ENST00000574668 CRB1P82279 1406 aa23.15■■□□□ 1.3
TMEM88-202ENST00000574668 PARP4Q9UKK3 1724 aaKnown RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms