RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 SPATA31A7Q8IWB4 1347 aa18.14■□□□□ 0.49
PRPF8-208ENST00000573716 ANKARQ7Z5J8 1434 aa18.14■□□□□ 0.49
PRPF8-208ENST00000573716 ADGRB2O60241 1585 aa18.13■□□□□ 0.49
PRPF8-208ENST00000573716 PRDM11Q9NQV5 511 aa18.13■□□□□ 0.49
PRPF8-208ENST00000573716 MINK1Q8N4C8 1332 aaPredicted RBP18.12■□□□□ 0.49
PRPF8-208ENST00000573716 TRIM37O94972 964 aa18.11■□□□□ 0.49
PRPF8-208ENST00000573716 THSD7AQ9UPZ6 1657 aa18.11■□□□□ 0.49
PRPF8-208ENST00000573716 ACIN1Q9UKV3 1341 aaKnown RBP18.1■□□□□ 0.49
PRPF8-208ENST00000573716 NGDNQ8NEJ9 315 aaKnown RBP18.1■□□□□ 0.49
PRPF8-208ENST00000573716 DISP2A7MBM2 1401 aa18.09■□□□□ 0.49
PRPF8-208ENST00000573716 STRN4Q9NRL3 753 aa18.09■□□□□ 0.49
PRPF8-208ENST00000573716 TRAK1Q9UPV9 953 aa18.09■□□□□ 0.49
PRPF8-208ENST00000573716 DLC1Q96QB1 1528 aa18.08■□□□□ 0.49
PRPF8-208ENST00000573716 APBA3O96018 575 aa18.08■□□□□ 0.48
PRPF8-208ENST00000573716 CHRNA2Q15822 529 aa18.08■□□□□ 0.48
PRPF8-208ENST00000573716 CRYBG1Q9Y4K1 1723 aa18.08■□□□□ 0.48
PRPF8-208ENST00000573716 PRR36Q9H6K5 1346 aa18.07■□□□□ 0.48
PRPF8-208ENST00000573716 ADRA2BP18089 450 aa18.07■□□□□ 0.48
PRPF8-208ENST00000573716 FAM196AQ6ZSG2 479 aa18.07■□□□□ 0.48
PRPF8-208ENST00000573716 USP35Q9P2H5 1018 aa18.07■□□□□ 0.48
PRPF8-208ENST00000573716 EIF3AQ14152 1382 aaKnown RBP18.06■□□□□ 0.48
PRPF8-208ENST00000573716 YY1P25490 414 aa18.06■□□□□ 0.48
PRPF8-208ENST00000573716 CAMKK2Q96RR4 588 aa18.06■□□□□ 0.48
PRPF8-208ENST00000573716 KIAA0232Q92628 1395 aa18.05■□□□□ 0.48
PRPF8-208ENST00000573716 SPATA31A1Q5TZJ5 1347 aa18.05■□□□□ 0.48
PRPF8-208ENST00000573716 TULP4Q9NRJ4 1543 aa18.05■□□□□ 0.48
PRPF8-208ENST00000573716 ZC3H6P61129 1189 aaKnown RBP18.03■□□□□ 0.48
PRPF8-208ENST00000573716 PDE3BQ13370 1112 aa18.03■□□□□ 0.48
PRPF8-208ENST00000573716 NUTM2GQ5VZR2 741 aa18.03■□□□□ 0.48
PRPF8-208ENST00000573716 WASLO00401 505 aaPredicted RBP18.02■□□□□ 0.48
PRPF8-208ENST00000573716 EVA1CP58658 441 aa18.02■□□□□ 0.48
PRPF8-208ENST00000573716 PPP1R1BQ9UD71 204 aaPredicted RBP18.02■□□□□ 0.48
PRPF8-208ENST00000573716 PHRF1Q9P1Y6 1649 aaKnown RBP18.01■□□□□ 0.47
PRPF8-208ENST00000573716 NBPF8Q3BBV2 869 aa18.01■□□□□ 0.47
PRPF8-208ENST00000573716 NBPF14Q5TI25 921 aa18.01■□□□□ 0.47
PRPF8-208ENST00000573716 KDM2AQ9Y2K7 1162 aa18.01■□□□□ 0.47
PRPF8-208ENST00000573716 RREB1Q92766 1687 aa18.01■□□□□ 0.47
PRPF8-208ENST00000573716 PARD3Q8TEW0 1356 aa18.01■□□□□ 0.47
PRPF8-208ENST00000573716 ITSN1Q15811 1721 aa18.01■□□□□ 0.47
PRPF8-208ENST00000573716 NUP188Q5SRE5 1749 aa18.01■□□□□ 0.47
PRPF8-208ENST00000573716 ADGRB1O14514 1584 aa18■□□□□ 0.47
PRPF8-208ENST00000573716 DCAF8L1A6NGE4 600 aa17.98■□□□□ 0.47
PRPF8-208ENST00000573716 NUDT16Q96DE0 195 aaKnown RBP17.96■□□□□ 0.47
PRPF8-208ENST00000573716 SPON1Q9HCB6 807 aa17.96■□□□□ 0.47
PRPF8-208ENST00000573716 SSH2Q76I76 1423 aa17.96■□□□□ 0.47
PRPF8-208ENST00000573716 LARP1Q6PKG0 1096 aaKnown RBP17.95■□□□□ 0.46
PRPF8-208ENST00000573716 DCAF11Q8TEB1 546 aa17.95■□□□□ 0.46
PRPF8-208ENST00000573716 ATP7BP35670 1465 aa17.95■□□□□ 0.46
PRPF8-208ENST00000573716 BARGINQ6ZT62 677 aa17.94■□□□□ 0.46
PRPF8-208ENST00000573716 TCP11L2Q8N4U5 519 aa17.93■□□□□ 0.46
PRPF8-208ENST00000573716 ARHGEF28Q8N1W1 1705 aaKnown RBP17.92■□□□□ 0.46
PRPF8-208ENST00000573716 KCNQ2O43526 872 aa17.92■□□□□ 0.46
PRPF8-208ENST00000573716 CAMTA1Q9Y6Y1 1673 aa17.92■□□□□ 0.46
PRPF8-208ENST00000573716 ZBTB7CA1YPR0 619 aa17.91■□□□□ 0.46
PRPF8-208ENST00000573716 NRKQ7Z2Y5 1582 aa17.91■□□□□ 0.46
PRPF8-208ENST00000573716 ABTB2Q8N961 1025 aa17.9■□□□□ 0.46
PRPF8-208ENST00000573716 CDK19Q9BWU1 502 aa17.9■□□□□ 0.46
PRPF8-208ENST00000573716 ACEP12821 1306 aa17.9■□□□□ 0.46
PRPF8-208ENST00000573716 NINLQ9Y2I6 1382 aa17.89■□□□□ 0.45
PRPF8-208ENST00000573716 TOPAZ1Q8N9V7 1692 aa17.87■□□□□ 0.45
PRPF8-208ENST00000573716 LMO7Q8WWI1 1683 aa17.87■□□□□ 0.45
PRPF8-208ENST00000573716 PARP4Q9UKK3 1724 aaKnown RBP17.86■□□□□ 0.45
PRPF8-208ENST00000573716 POLR3AO14802 1390 aaPredicted RBP17.86■□□□□ 0.45
PRPF8-208ENST00000573716 THRAP3Q9Y2W1 955 aaKnown RBP17.85■□□□□ 0.45
PRPF8-208ENST00000573716 OVOS2A0A0G2JMS6 1433 aa17.84■□□□□ 0.45
PRPF8-208ENST00000573716 OVOS2A0A0J9YW53 1432 aa17.84■□□□□ 0.45
PRPF8-208ENST00000573716 OVOS2Q6IE36 1432 aa17.84■□□□□ 0.45
PRPF8-208ENST00000573716 CPDO75976 1380 aa17.84■□□□□ 0.45
PRPF8-208ENST00000573716 CCDC61Q9Y6R9 512 aa17.84■□□□□ 0.45
PRPF8-208ENST00000573716 RAB3GAP2Q9H2M9 1393 aa17.83■□□□□ 0.45
PRPF8-208ENST00000573716 GCP02774 474 aa17.83■□□□□ 0.44
PRPF8-208ENST00000573716 NLRP13Q86W25 1043 aa17.83■□□□□ 0.44
PRPF8-208ENST00000573716 SBF2Q86WG5 1849 aa17.83■□□□□ 0.44
PRPF8-208ENST00000573716 COL5A2P05997 1499 aaPredicted RBP17.82■□□□□ 0.44
PRPF8-208ENST00000573716 USP19O94966 1318 aa17.82■□□□□ 0.44
PRPF8-208ENST00000573716 BCL11BQ9C0K0 894 aaPredicted RBP17.82■□□□□ 0.44
PRPF8-208ENST00000573716 ANO8Q9HCE9 1232 aaPredicted RBP17.82■□□□□ 0.44
PRPF8-208ENST00000573716 CRB1P82279 1406 aa17.81■□□□□ 0.44
PRPF8-208ENST00000573716 PLEKHG3A1L390 1219 aa17.81■□□□□ 0.44
PRPF8-208ENST00000573716 C11orf95C9JLR9 678 aaPredicted RBP17.81■□□□□ 0.44
PRPF8-208ENST00000573716 ZBTB7AO95365 584 aa17.81■□□□□ 0.44
PRPF8-208ENST00000573716 RGPD3A6NKT7 1758 aaPredicted RBP17.81■□□□□ 0.44
PRPF8-208ENST00000573716 RGPD4Q7Z3J3 1758 aa17.81■□□□□ 0.44
PRPF8-208ENST00000573716 PEAK1Q9H792 1746 aa17.81■□□□□ 0.44
PRPF8-208ENST00000573716 LRRC37A3O60309 1634 aa17.8■□□□□ 0.44
PRPF8-208ENST00000573716 SRPK2P78362 688 aaKnown RBP17.8■□□□□ 0.44
PRPF8-208ENST00000573716 DDB1Q16531 1140 aa17.8■□□□□ 0.44
PRPF8-208ENST00000573716 PDGFDQ9GZP0 370 aaPredicted RBP17.8■□□□□ 0.44
PRPF8-208ENST00000573716 CASZ1Q86V15 1759 aa17.8■□□□□ 0.44
PRPF8-208ENST00000573716 TOM1L2Q6ZVM7 507 aa17.79■□□□□ 0.44
PRPF8-208ENST00000573716 PTF1AQ7RTS3 328 aa17.79■□□□□ 0.44
PRPF8-208ENST00000573716 MYOM1P52179 1685 aa17.79■□□□□ 0.44
PRPF8-208ENST00000573716 PPIP5K1Q6PFW1 1433 aa17.79■□□□□ 0.44
PRPF8-208ENST00000573716 PLSCR1O15162 318 aa17.78■□□□□ 0.44
PRPF8-208ENST00000573716 STAC3Q96MF2 364 aa17.78■□□□□ 0.44
PRPF8-208ENST00000573716 ATF5Q9Y2D1 282 aaPredicted RBP17.78■□□□□ 0.44
PRPF8-208ENST00000573716 AKAP12Q02952 1782 aa17.77■□□□□ 0.44
PRPF8-208ENST00000573716 PIAS4Q8N2W9 510 aaPredicted RBP17.77■□□□□ 0.44
PRPF8-208ENST00000573716 NLRP6P59044 892 aa17.76■□□□□ 0.43
PRPF8-208ENST00000573716 WNK3Q9BYP7 1800 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms