RNA–Protein interactions for RNA: ENST00000572476.1

SLC12A4-210, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-210ENST00000572476 RALGAPBQ86X10 1494 aa21.3■■□□□ 1
SLC12A4-210ENST00000572476 FAM83GA6ND36 823 aa21.29■■□□□ 1
SLC12A4-210ENST00000572476 SRPK2P78362 688 aaKnown RBP21.29■■□□□ 1
SLC12A4-210ENST00000572476 NWD2Q9ULI1 1742 aa21.29■■□□□ 1
SLC12A4-210ENST00000572476 PPIP5K1Q6PFW1 1433 aa21.29■■□□□ 1
SLC12A4-210ENST00000572476 UPF1Q92900 1129 aaKnown RBP eCLIP21.28■■□□□ 1
SLC12A4-210ENST00000572476 GJD4Q96KN9 370 aaPredicted RBP21.28■■□□□ 1
SLC12A4-210ENST00000572476 SBNO2Q9Y2G9 1366 aa21.27■■□□□ 1
SLC12A4-210ENST00000572476 EVC2Q86UK5 1308 aa21.27■□□□□ 0.99
SLC12A4-210ENST00000572476 PLCH1Q4KWH8 1693 aa21.26■□□□□ 0.99
SLC12A4-210ENST00000572476 PAK3O75914 559 aaPredicted RBP21.26■□□□□ 0.99
SLC12A4-210ENST00000572476 BRD4O60885 1362 aaPredicted RBP21.25■□□□□ 0.99
SLC12A4-210ENST00000572476 GLI3P10071 1580 aa21.25■□□□□ 0.99
SLC12A4-210ENST00000572476 HAP1P54257 671 aaPredicted RBP21.25■□□□□ 0.99
SLC12A4-210ENST00000572476 VPS72Q15906 364 aa21.24■□□□□ 0.99
SLC12A4-210ENST00000572476 CABP1Q9NZU7 370 aa21.24■□□□□ 0.99
SLC12A4-210ENST00000572476 SSH2Q76I76 1423 aa21.23■□□□□ 0.99
SLC12A4-210ENST00000572476 PLEKHG5O94827 1062 aa21.23■□□□□ 0.99
SLC12A4-210ENST00000572476 CARD11Q9BXL7 1154 aa21.23■□□□□ 0.99
SLC12A4-210ENST00000572476 NRAPQ86VF7 1730 aa21.22■□□□□ 0.99
SLC12A4-210ENST00000572476 COL14A1Q05707 1796 aaKnown RBP21.22■□□□□ 0.99
SLC12A4-210ENST00000572476 ONECUT3O60422 494 aaPredicted RBP21.21■□□□□ 0.99
SLC12A4-210ENST00000572476 USP19O94966 1318 aa21.21■□□□□ 0.99
SLC12A4-210ENST00000572476 PHRF1Q9P1Y6 1649 aaKnown RBP21.21■□□□□ 0.99
SLC12A4-210ENST00000572476 USP6P35125 1406 aa21.21■□□□□ 0.99
SLC12A4-210ENST00000572476 NUTM2GQ5VZR2 741 aa21.17■□□□□ 0.98
SLC12A4-210ENST00000572476 ABTB2Q8N961 1025 aa21.17■□□□□ 0.98
SLC12A4-210ENST00000572476 BTG4Q9NY30 223 aa21.17■□□□□ 0.98
SLC12A4-210ENST00000572476 CLSPNQ9HAW4 1339 aa21.17■□□□□ 0.98
SLC12A4-210ENST00000572476 ATAD2Q6PL18 1390 aa21.17■□□□□ 0.98
SLC12A4-210ENST00000572476 CPSF1Q10570 1443 aaKnown RBP21.17■□□□□ 0.98
SLC12A4-210ENST00000572476 KIAA0232Q92628 1395 aa21.16■□□□□ 0.98
SLC12A4-210ENST00000572476 NRKQ7Z2Y5 1582 aa21.15■□□□□ 0.98
SLC12A4-210ENST00000572476 CPDO75976 1380 aa21.15■□□□□ 0.98
SLC12A4-210ENST00000572476 ZNF692Q9BU19 519 aaPredicted RBP21.15■□□□□ 0.98
SLC12A4-210ENST00000572476 AKAP12Q02952 1782 aa21.15■□□□□ 0.98
SLC12A4-210ENST00000572476 PUS7Q96PZ0 661 aaKnown RBP21.14■□□□□ 0.97
SLC12A4-210ENST00000572476 TESK2Q96S53 571 aa21.14■□□□□ 0.97
SLC12A4-210ENST00000572476 PRDM11Q9NQV5 511 aa21.14■□□□□ 0.97
SLC12A4-210ENST00000572476 NLRP13Q86W25 1043 aa21.13■□□□□ 0.97
SLC12A4-210ENST00000572476 TIMELESSQ9UNS1 1208 aa21.13■□□□□ 0.97
SLC12A4-210ENST00000572476 GCP02774 474 aa21.12■□□□□ 0.97
SLC12A4-210ENST00000572476 SPATA31A5Q5VU36 1347 aa21.11■□□□□ 0.97
SLC12A4-210ENST00000572476 SPATA31A7Q8IWB4 1347 aa21.11■□□□□ 0.97
SLC12A4-210ENST00000572476 SLIT3O75094 1523 aa21.11■□□□□ 0.97
SLC12A4-210ENST00000572476 ZC3H6P61129 1189 aaKnown RBP21.11■□□□□ 0.97
SLC12A4-210ENST00000572476 SEPT12Q8IYM1 358 aa21.11■□□□□ 0.97
SLC12A4-210ENST00000572476 CD163L1Q9NR16 1453 aa21.11■□□□□ 0.97
SLC12A4-210ENST00000572476 PIK3C2AO00443 1686 aa21.11■□□□□ 0.97
SLC12A4-210ENST00000572476 BRWD3Q6RI45 1802 aa21.11■□□□□ 0.97
SLC12A4-210ENST00000572476 TTC21BQ7Z4L5 1316 aa21.1■□□□□ 0.97
SLC12A4-210ENST00000572476 LMO7Q8WWI1 1683 aa21.1■□□□□ 0.97
SLC12A4-210ENST00000572476 CHRNA2Q15822 529 aa21.1■□□□□ 0.97
SLC12A4-210ENST00000572476 PCGF6Q9BYE7 350 aa21.1■□□□□ 0.97
SLC12A4-210ENST00000572476 EP400Q96L91 3159 aa21.1■□□□□ 0.97
SLC12A4-210ENST00000572476 ST20-MTHFSA0A0A6YYL1 179 aa21.09■□□□□ 0.97
SLC12A4-210ENST00000572476 CAMTA1Q9Y6Y1 1673 aa21.08■□□□□ 0.96
SLC12A4-210ENST00000572476 TTC21AQ8NDW8 1320 aa21.07■□□□□ 0.96
SLC12A4-210ENST00000572476 MON2Q7Z3U7 1717 aa21.07■□□□□ 0.96
SLC12A4-210ENST00000572476 NLRP6P59044 892 aa21.07■□□□□ 0.96
SLC12A4-210ENST00000572476 CCDC9Q9Y3X0 531 aaKnown RBP21.06■□□□□ 0.96
SLC12A4-210ENST00000572476 SPATA31A1Q5TZJ5 1347 aa21.05■□□□□ 0.96
SLC12A4-210ENST00000572476 SLC12A5Q9H2X9 1139 aa21.05■□□□□ 0.96
SLC12A4-210ENST00000572476 KTN1Q86UP2 1357 aaKnown RBP21.05■□□□□ 0.96
SLC12A4-210ENST00000572476 SLC24A1O60721 1099 aa21.04■□□□□ 0.96
SLC12A4-210ENST00000572476 FAM98CQ17RN3 349 aaKnown RBP21.04■□□□□ 0.96
SLC12A4-210ENST00000572476 THSD7AQ9UPZ6 1657 aa21.04■□□□□ 0.96
SLC12A4-210ENST00000572476 CCDC125Q86Z20 511 aa21.03■□□□□ 0.96
SLC12A4-210ENST00000572476 COL18A1P39060 1754 aa21.02■□□□□ 0.96
SLC12A4-210ENST00000572476 AATKQ6ZMQ8 1374 aa21.02■□□□□ 0.96
SLC12A4-210ENST00000572476 USP31Q70CQ4 1352 aa21.02■□□□□ 0.96
SLC12A4-210ENST00000572476 USP54Q70EL1 1684 aa21.02■□□□□ 0.95
SLC12A4-210ENST00000572476 USP47Q96K76 1375 aa21.01■□□□□ 0.95
SLC12A4-210ENST00000572476 KRT27Q7Z3Y8 459 aa21.01■□□□□ 0.95
SLC12A4-210ENST00000572476 COL5A2P05997 1499 aaPredicted RBP21■□□□□ 0.95
SLC12A4-210ENST00000572476 NFAT5O94916 1531 aa20.99■□□□□ 0.95
SLC12A4-210ENST00000572476 NINLQ9Y2I6 1382 aa20.99■□□□□ 0.95
SLC12A4-210ENST00000572476 LARP1Q6PKG0 1096 aaKnown RBP20.99■□□□□ 0.95
SLC12A4-210ENST00000572476 BARGINQ6ZT62 677 aa20.99■□□□□ 0.95
SLC12A4-210ENST00000572476 ARHGEF25Q86VW2 580 aa20.99■□□□□ 0.95
SLC12A4-210ENST00000572476 STRN4Q9NRL3 753 aa20.99■□□□□ 0.95
SLC12A4-210ENST00000572476 A0A1W2PP64 1363 aa20.98■□□□□ 0.95
SLC12A4-210ENST00000572476 EDC4Q6P2E9 1401 aaKnown RBP20.98■□□□□ 0.95
SLC12A4-210ENST00000572476 KCNH5Q8NCM2 988 aa20.98■□□□□ 0.95
SLC12A4-210ENST00000572476 TMC1Q8TDI8 760 aa20.98■□□□□ 0.95
SLC12A4-210ENST00000572476 BLMP54132 1417 aaPredicted RBP20.97■□□□□ 0.95
SLC12A4-210ENST00000572476 EVA1CP58658 441 aa20.97■□□□□ 0.95
SLC12A4-210ENST00000572476 ZRANB1Q9UGI0 708 aa20.97■□□□□ 0.95
SLC12A4-210ENST00000572476 HDGFL2Q7Z4V5 671 aaPredicted RBP20.96■□□□□ 0.95
SLC12A4-210ENST00000572476 TERF2IPQ9NYB0 399 aa20.96■□□□□ 0.95
SLC12A4-210ENST00000572476 AXIN2Q9Y2T1 843 aa20.96■□□□□ 0.95
SLC12A4-210ENST00000572476 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.95■□□□□ 0.94
SLC12A4-210ENST00000572476 NME9Q86XW9 330 aa20.94■□□□□ 0.94
SLC12A4-210ENST00000572476 TCP11L2Q8N4U5 519 aa20.94■□□□□ 0.94
SLC12A4-210ENST00000572476 THRAP3Q9Y2W1 955 aaKnown RBP20.94■□□□□ 0.94
SLC12A4-210ENST00000572476 TMF1P82094 1093 aa20.92■□□□□ 0.94
SLC12A4-210ENST00000572476 CRB1P82279 1406 aa20.92■□□□□ 0.94
SLC12A4-210ENST00000572476 ABCC6O95255 1503 aa20.92■□□□□ 0.94
SLC12A4-210ENST00000572476 OVOS2A0A0J9YW53 1432 aa20.91■□□□□ 0.94
SLC12A4-210ENST00000572476 OVOS2Q6IE36 1432 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms