RNA–Protein interactions for RNA: ENST00000570111.5

GGA2-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-217ENST00000570111 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.14□□□□□ -0.63
GGA2-217ENST00000570111 NGDNQ8NEJ9 315 aaKnown RBP11.14□□□□□ -0.63
GGA2-217ENST00000570111 COG3Q96JB2 828 aa11.14□□□□□ -0.63
GGA2-217ENST00000570111 AATKQ6ZMQ8 1374 aa11.14□□□□□ -0.63
GGA2-217ENST00000570111 SSH2Q76I76 1423 aa11.13□□□□□ -0.63
GGA2-217ENST00000570111 TNNT2P45379 298 aaPredicted RBP11.13□□□□□ -0.63
GGA2-217ENST00000570111 DMRT2Q9Y5R5 561 aa11.13□□□□□ -0.63
GGA2-217ENST00000570111 TTC21BQ7Z4L5 1316 aa11.12□□□□□ -0.63
GGA2-217ENST00000570111 KIF1AQ12756 1690 aa11.12□□□□□ -0.63
GGA2-217ENST00000570111 SHPRHQ149N8 1683 aa11.12□□□□□ -0.63
GGA2-217ENST00000570111 NUTM2FA1L443 756 aa11.12□□□□□ -0.63
GGA2-217ENST00000570111 MTHFSP49914 203 aa11.12□□□□□ -0.63
GGA2-217ENST00000570111 PPP4R3CPQ6ZMV5 832 aa11.12□□□□□ -0.63
GGA2-217ENST00000570111 NGEFQ8N5V2 710 aa11.12□□□□□ -0.63
GGA2-217ENST00000570111 C19orf44Q9H6X5 657 aa11.12□□□□□ -0.63
GGA2-217ENST00000570111 SMG6Q86US8 1419 aaKnown RBP11.11□□□□□ -0.63
GGA2-217ENST00000570111 STRCP1A6NGW2 1772 aa11.11□□□□□ -0.63
GGA2-217ENST00000570111 LRRC7Q96NW7 1537 aa11.11□□□□□ -0.63
GGA2-217ENST00000570111 PHF8Q9UPP1 1060 aa11.11□□□□□ -0.63
GGA2-217ENST00000570111 USP54Q70EL1 1684 aa11.11□□□□□ -0.63
GGA2-217ENST00000570111 OVOS2A0A0J9YW53 1432 aa11.1□□□□□ -0.63
GGA2-217ENST00000570111 OVOS2Q6IE36 1432 aa11.1□□□□□ -0.63
GGA2-217ENST00000570111 PDE3BQ13370 1112 aa11.1□□□□□ -0.63
GGA2-217ENST00000570111 NME9Q86XW9 330 aa11.1□□□□□ -0.63
GGA2-217ENST00000570111 PMFBP1Q8TBY8 1022 aa11.1□□□□□ -0.63
GGA2-217ENST00000570111 ADAMTS8Q9UP79 889 aa11.1□□□□□ -0.63
GGA2-217ENST00000570111 NUDCQ9Y266 331 aa11.1□□□□□ -0.63
GGA2-217ENST00000570111 TMEM94Q12767 1356 aa11.1□□□□□ -0.63
GGA2-217ENST00000570111 CDK12Q9NYV4 1490 aaPredicted RBP11.09□□□□□ -0.63
GGA2-217ENST00000570111 USP31Q70CQ4 1352 aa11.09□□□□□ -0.63
GGA2-217ENST00000570111 PNPLA6Q8IY17 1366 aa11.09□□□□□ -0.63
GGA2-217ENST00000570111 COL3A1P02461 1466 aaPredicted RBP11.08□□□□□ -0.64
GGA2-217ENST00000570111 MSH6P52701 1360 aa11.08□□□□□ -0.64
GGA2-217ENST00000570111 ATF3P18847 181 aa11.08□□□□□ -0.64
GGA2-217ENST00000570111 CADPS2Q86UW7 1296 aa11.08□□□□□ -0.64
GGA2-217ENST00000570111 PNNQ9H307 717 aaKnown RBP11.08□□□□□ -0.64
GGA2-217ENST00000570111 PIK3C2AO00443 1686 aa11.08□□□□□ -0.64
GGA2-217ENST00000570111 MAP2P11137 1827 aaKnown RBP11.07□□□□□ -0.64
GGA2-217ENST00000570111 ESCO1Q5FWF5 840 aa11.07□□□□□ -0.64
GGA2-217ENST00000570111 C1orf167Q5SNV9 1468 aa11.06□□□□□ -0.64
GGA2-217ENST00000570111 DIAPH1O60610 1272 aaKnown RBP11.06□□□□□ -0.64
GGA2-217ENST00000570111 RBM33Q96EV2 1170 aaKnown RBP11.06□□□□□ -0.64
GGA2-217ENST00000570111 POLKQ9UBT6 870 aa11.06□□□□□ -0.64
GGA2-217ENST00000570111 KCNA4P22459 653 aa11.05□□□□□ -0.64
GGA2-217ENST00000570111 MST1RQ04912 1400 aa11.05□□□□□ -0.64
GGA2-217ENST00000570111 PSME1Q06323 249 aa11.05□□□□□ -0.64
GGA2-217ENST00000570111 NCBP3Q53F19 620 aaKnown RBP11.05□□□□□ -0.64
GGA2-217ENST00000570111 XIRP1Q702N8 1843 aaKnown RBP11.05□□□□□ -0.64
GGA2-217ENST00000570111 KIF24Q5T7B8 1368 aa11.04□□□□□ -0.64
GGA2-217ENST00000570111 U2AF1L5P0DN76 240 aaPredicted RBP11.04□□□□□ -0.64
GGA2-217ENST00000570111 U2AF1Q01081 240 aaKnown RBP eCLIP11.04□□□□□ -0.641e-7■■■□□ 18.5
GGA2-217ENST00000570111 RUNDC1Q96C34 613 aa11.04□□□□□ -0.64
GGA2-217ENST00000570111 NLRP6P59044 892 aa11.03□□□□□ -0.64
GGA2-217ENST00000570111 ABTB2Q8N961 1025 aa11.03□□□□□ -0.64
GGA2-217ENST00000570111 ZRANB1Q9UGI0 708 aa11.03□□□□□ -0.64
GGA2-217ENST00000570111 IQSEC2Q5JU85 1478 aa11.02□□□□□ -0.65
GGA2-217ENST00000570111 U2SURPO15042 1029 aaKnown RBP11.02□□□□□ -0.65
GGA2-217ENST00000570111 PPM1GO15355 546 aaPredicted RBP11.02□□□□□ -0.65
GGA2-217ENST00000570111 PAK3O75914 559 aaPredicted RBP11.02□□□□□ -0.65
GGA2-217ENST00000570111 ORAI2Q96SN7 254 aa11.02□□□□□ -0.65
GGA2-217ENST00000570111 GTF3C3Q9Y5Q9 886 aa11.02□□□□□ -0.65
GGA2-217ENST00000570111 ZNF335Q9H4Z2 1342 aaPredicted RBP11.02□□□□□ -0.65
GGA2-217ENST00000570111 SBNO1A3KN83 1393 aa11.02□□□□□ -0.65
GGA2-217ENST00000570111 TRPM3Q9HCF6 1732 aaPredicted RBP11.01□□□□□ -0.65
GGA2-217ENST00000570111 MARF1Q9Y4F3 1742 aaKnown RBP11.01□□□□□ -0.65
GGA2-217ENST00000570111 FCHSD2O94868 740 aa11.01□□□□□ -0.65
GGA2-217ENST00000570111 NEFLP07196 543 aa11.01□□□□□ -0.65
GGA2-217ENST00000570111 NEFMP07197 916 aa11.01□□□□□ -0.65
GGA2-217ENST00000570111 CCDC146Q8IYE0 955 aa11.01□□□□□ -0.65
GGA2-217ENST00000570111 KCNH5Q8NCM2 988 aa11.01□□□□□ -0.65
GGA2-217ENST00000570111 EMILIN1Q9Y6C2 1016 aa11.01□□□□□ -0.65
GGA2-217ENST00000570111 FLT4P35916 1363 aa11.01□□□□□ -0.65
GGA2-217ENST00000570111 APAF1O14727 1248 aa11□□□□□ -0.65
GGA2-217ENST00000570111 RRS1Q15050 365 aaKnown RBP11□□□□□ -0.65
GGA2-217ENST00000570111 NPHP3Q7Z494 1330 aa11□□□□□ -0.65
GGA2-217ENST00000570111 MAPK8IP3Q9UPT6 1336 aa11□□□□□ -0.65
GGA2-217ENST00000570111 RTL1A6NKG5 1358 aa11□□□□□ -0.65
GGA2-217ENST00000570111 FOXO3O43524 673 aa10.99□□□□□ -0.65
GGA2-217ENST00000570111 IL13P35225 146 aa10.99□□□□□ -0.65
GGA2-217ENST00000570111 GOLGA2Q08379 1002 aa10.99□□□□□ -0.65
GGA2-217ENST00000570111 CCDC27Q2M243 656 aa10.99□□□□□ -0.65
GGA2-217ENST00000570111 ZNF521Q96K83 1311 aa10.99□□□□□ -0.65
GGA2-217ENST00000570111 SLIT3O75094 1523 aa10.99□□□□□ -0.65
GGA2-217ENST00000570111 PHRF1Q9P1Y6 1649 aaKnown RBP10.98□□□□□ -0.65
GGA2-217ENST00000570111 ALS2Q96Q42 1657 aa10.98□□□□□ -0.65
GGA2-217ENST00000570111 PEAK1Q9H792 1746 aa10.98□□□□□ -0.65
GGA2-217ENST00000570111 KRT28Q7Z3Y7 464 aa10.98□□□□□ -0.65
GGA2-217ENST00000570111 TCP11L2Q8N4U5 519 aa10.98□□□□□ -0.65
GGA2-217ENST00000570111 SALL2Q9Y467 1007 aaPredicted RBP10.98□□□□□ -0.65
GGA2-217ENST00000570111 MAP3K19Q56UN5 1328 aa10.98□□□□□ -0.65
GGA2-217ENST00000570111 AMPHP49418 695 aa10.97□□□□□ -0.65
GGA2-217ENST00000570111 PLEKHF1Q96S99 279 aa10.97□□□□□ -0.65
GGA2-217ENST00000570111 NFAT5O94916 1531 aa10.97□□□□□ -0.65
GGA2-217ENST00000570111 LTN1O94822 1766 aa10.96□□□□□ -0.65
GGA2-217ENST00000570111 RGPD1P0DJD0 1748 aa10.96□□□□□ -0.65
GGA2-217ENST00000570111 ARHGEF10O15013 1369 aa10.96□□□□□ -0.65
GGA2-217ENST00000570111 USP19O94966 1318 aa10.96□□□□□ -0.65
GGA2-217ENST00000570111 FBLN1P23142 703 aa10.96□□□□□ -0.65
GGA2-217ENST00000570111 WDR63Q8IWG1 891 aa10.96□□□□□ -0.65
GGA2-217ENST00000570111 PXDNQ92626 1479 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms