RNA–Protein interactions for RNA: ENST00000569721.1

PDPK1-216, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 5

Gene PDPK1, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-216ENST00000569721 QTRT2Q9H974 415 aaKnown RBP29.07■■■□□ 2.24
PDPK1-216ENST00000569721 USP21Q9UK80 565 aa29.07■■■□□ 2.24
PDPK1-216ENST00000569721 ST20-MTHFSA0A0A6YYL1 179 aa29.04■■■□□ 2.24
PDPK1-216ENST00000569721 RXRBP28702 533 aa29.04■■■□□ 2.24
PDPK1-216ENST00000569721 ATAD2Q6PL18 1390 aa29.01■■■□□ 2.24
PDPK1-216ENST00000569721 ABCA3Q99758 1704 aa29.01■■■□□ 2.23
PDPK1-216ENST00000569721 NUTM2GQ5VZR2 741 aa29■■■□□ 2.23
PDPK1-216ENST00000569721 ABTB2Q8N961 1025 aa28.99■■■□□ 2.23
PDPK1-216ENST00000569721 RBM6P78332 1123 aaKnown RBP28.98■■■□□ 2.23
PDPK1-216ENST00000569721 TESK2Q96S53 571 aa28.98■■■□□ 2.23
PDPK1-216ENST00000569721 TRPC5Q9UL62 973 aaPredicted RBP28.98■■■□□ 2.23
PDPK1-216ENST00000569721 USP47Q96K76 1375 aa28.98■■■□□ 2.23
PDPK1-216ENST00000569721 BRD4O60885 1362 aaPredicted RBP28.96■■■□□ 2.23
PDPK1-216ENST00000569721 BCL9LQ86UU0 1499 aa28.96■■■□□ 2.23
PDPK1-216ENST00000569721 USP6P35125 1406 aa28.95■■■□□ 2.23
PDPK1-216ENST00000569721 SLC24A1O60721 1099 aa28.95■■■□□ 2.22
PDPK1-216ENST00000569721 ZNF692Q9BU19 519 aaPredicted RBP28.95■■■□□ 2.22
PDPK1-216ENST00000569721 FAM83GA6ND36 823 aa28.94■■■□□ 2.22
PDPK1-216ENST00000569721 SLIT2O94813 1529 aa28.94■■■□□ 2.22
PDPK1-216ENST00000569721 UNC5CLQ8IV45 518 aa28.93■■■□□ 2.22
PDPK1-216ENST00000569721 TMC1Q8TDI8 760 aa28.93■■■□□ 2.22
PDPK1-216ENST00000569721 ATRNO75882 1429 aa28.92■■■□□ 2.22
PDPK1-216ENST00000569721 CRYBG1Q9Y4K1 1723 aa28.91■■■□□ 2.22
PDPK1-216ENST00000569721 PUS7Q96PZ0 661 aaKnown RBP28.91■■■□□ 2.22
PDPK1-216ENST00000569721 NLRP13Q86W25 1043 aa28.9■■■□□ 2.22
PDPK1-216ENST00000569721 AKAP12Q02952 1782 aa28.88■■■□□ 2.21
PDPK1-216ENST00000569721 SLC12A5Q9H2X9 1139 aa28.88■■■□□ 2.21
PDPK1-216ENST00000569721 CDK12Q9NYV4 1490 aaPredicted RBP28.88■■■□□ 2.21
PDPK1-216ENST00000569721 KTN1Q86UP2 1357 aaKnown RBP28.88■■■□□ 2.21
PDPK1-216ENST00000569721 CPSF1Q10570 1443 aaKnown RBP28.87■■■□□ 2.21
PDPK1-216ENST00000569721 SSH2Q76I76 1423 aa28.87■■■□□ 2.21
PDPK1-216ENST00000569721 PRDM11Q9NQV5 511 aa28.87■■■□□ 2.21
PDPK1-216ENST00000569721 PLCH1Q4KWH8 1693 aa28.86■■■□□ 2.21
PDPK1-216ENST00000569721 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.86■■■□□ 2.21
PDPK1-216ENST00000569721 NLRP6P59044 892 aa28.86■■■□□ 2.21
PDPK1-216ENST00000569721 ZC3H6P61129 1189 aaKnown RBP28.86■■■□□ 2.21
PDPK1-216ENST00000569721 TMF1P82094 1093 aa28.86■■■□□ 2.21
PDPK1-216ENST00000569721 TTC21BQ7Z4L5 1316 aa28.86■■■□□ 2.21
PDPK1-216ENST00000569721 PHRF1Q9P1Y6 1649 aaKnown RBP28.86■■■□□ 2.21
PDPK1-216ENST00000569721 GJD4Q96KN9 370 aaPredicted RBP28.85■■■□□ 2.21
PDPK1-216ENST00000569721 BTG4Q9NY30 223 aa28.85■■■□□ 2.21
PDPK1-216ENST00000569721 NWD2Q9ULI1 1742 aa28.85■■■□□ 2.21
PDPK1-216ENST00000569721 COL14A1Q05707 1796 aaKnown RBP28.84■■■□□ 2.21
PDPK1-216ENST00000569721 HDGFL2Q7Z4V5 671 aaPredicted RBP28.84■■■□□ 2.21
PDPK1-216ENST00000569721 USP19O94966 1318 aa28.84■■■□□ 2.21
PDPK1-216ENST00000569721 KIAA0232Q92628 1395 aa28.84■■■□□ 2.21
PDPK1-216ENST00000569721 TERF2IPQ9NYB0 399 aa28.82■■■□□ 2.2
PDPK1-216ENST00000569721 RGS12O14924 1447 aa28.82■■■□□ 2.2
PDPK1-216ENST00000569721 TTC21AQ8NDW8 1320 aa28.81■■■□□ 2.2
PDPK1-216ENST00000569721 GCP02774 474 aa28.81■■■□□ 2.2
PDPK1-216ENST00000569721 CHRNA2Q15822 529 aa28.81■■■□□ 2.2
PDPK1-216ENST00000569721 VPS72Q15906 364 aa28.81■■■□□ 2.2
PDPK1-216ENST00000569721 CCDC9Q9Y3X0 531 aaKnown RBP28.81■■■□□ 2.2
PDPK1-216ENST00000569721 CD163L1Q9NR16 1453 aa28.8■■■□□ 2.2
PDPK1-216ENST00000569721 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.79■■■□□ 2.2
PDPK1-216ENST00000569721 MON2Q7Z3U7 1717 aa28.79■■■□□ 2.2
PDPK1-216ENST00000569721 PIK3C2AO00443 1686 aa28.79■■■□□ 2.2
PDPK1-216ENST00000569721 NRKQ7Z2Y5 1582 aa28.78■■■□□ 2.2
PDPK1-216ENST00000569721 CDCA8Q53HL2 280 aa28.77■■■□□ 2.2
PDPK1-216ENST00000569721 NINLQ9Y2I6 1382 aa28.76■■■□□ 2.2
PDPK1-216ENST00000569721 A0A1W2PP64 1363 aa28.75■■■□□ 2.19
PDPK1-216ENST00000569721 GLI3P10071 1580 aa28.75■■■□□ 2.19
PDPK1-216ENST00000569721 NRAPQ86VF7 1730 aa28.74■■■□□ 2.19
PDPK1-216ENST00000569721 CPDO75976 1380 aa28.74■■■□□ 2.19
PDPK1-216ENST00000569721 EIF4G2P78344 907 aaKnown RBP eCLIP28.73■■■□□ 2.19
PDPK1-216ENST00000569721 ZBTB7CA1YPR0 619 aa28.72■■■□□ 2.19
PDPK1-216ENST00000569721 SLIT3O75094 1523 aa28.72■■■□□ 2.19
PDPK1-216ENST00000569721 EDC4Q6P2E9 1401 aaKnown RBP28.71■■■□□ 2.19
PDPK1-216ENST00000569721 STRN4Q9NRL3 753 aa28.71■■■□□ 2.19
PDPK1-216ENST00000569721 HSPA5P11021 654 aaKnown RBP28.7■■■□□ 2.18
PDPK1-216ENST00000569721 NME9Q86XW9 330 aa28.7■■■□□ 2.18
PDPK1-216ENST00000569721 ZRANB1Q9UGI0 708 aa28.7■■■□□ 2.18
PDPK1-216ENST00000569721 SOX12O15370 315 aa28.69■■■□□ 2.18
PDPK1-216ENST00000569721 EVA1CP58658 441 aa28.69■■■□□ 2.18
PDPK1-216ENST00000569721 KCNH5Q8NCM2 988 aa28.69■■■□□ 2.18
PDPK1-216ENST00000569721 USP31Q70CQ4 1352 aa28.66■■■□□ 2.18
PDPK1-216ENST00000569721 ANKRD36BQ8N2N9 1353 aa28.66■■■□□ 2.18
PDPK1-216ENST00000569721 SPATA31A5Q5VU36 1347 aa28.66■■■□□ 2.18
PDPK1-216ENST00000569721 SPATA31A7Q8IWB4 1347 aa28.66■■■□□ 2.18
PDPK1-216ENST00000569721 CAMTA1Q9Y6Y1 1673 aa28.65■■■□□ 2.18
PDPK1-216ENST00000569721 SEPT12Q8IYM1 358 aa28.65■■■□□ 2.18
PDPK1-216ENST00000569721 UPF1Q92900 1129 aaKnown RBP eCLIP28.65■■■□□ 2.181e-10■■■■■ 37.4
PDPK1-216ENST00000569721 ONECUT3O60422 494 aaPredicted RBP28.64■■■□□ 2.18
PDPK1-216ENST00000569721 FAM98CQ17RN3 349 aaKnown RBP28.63■■■□□ 2.17
PDPK1-216ENST00000569721 LMO7Q8WWI1 1683 aa28.63■■■□□ 2.17
PDPK1-216ENST00000569721 A0A0G2JS52 829 aa28.62■■■□□ 2.17
PDPK1-216ENST00000569721 MYT1Q01538 1121 aa28.62■■■□□ 2.17
PDPK1-216ENST00000569721 ARHGEF25Q86VW2 580 aa28.62■■■□□ 2.17
PDPK1-216ENST00000569721 POLR3GLQ9BT43 218 aa28.62■■■□□ 2.17
PDPK1-216ENST00000569721 AATKQ6ZMQ8 1374 aa28.62■■■□□ 2.17
PDPK1-216ENST00000569721 SPATA31A1Q5TZJ5 1347 aa28.6■■■□□ 2.17
PDPK1-216ENST00000569721 LARP1Q6PKG0 1096 aaKnown RBP28.59■■■□□ 2.17
PDPK1-216ENST00000569721 USP35Q9P2H5 1018 aa28.59■■■□□ 2.17
PDPK1-216ENST00000569721 USP54Q70EL1 1684 aa28.58■■■□□ 2.17
PDPK1-216ENST00000569721 NFAT5O94916 1531 aa28.58■■■□□ 2.17
PDPK1-216ENST00000569721 BRWD3Q6RI45 1802 aa28.57■■■□□ 2.16
PDPK1-216ENST00000569721 COL5A2P05997 1499 aaPredicted RBP28.56■■■□□ 2.16
PDPK1-216ENST00000569721 AXIN2Q9Y2T1 843 aa28.56■■■□□ 2.16
PDPK1-216ENST00000569721 COL18A1P39060 1754 aa28.55■■■□□ 2.16
PDPK1-216ENST00000569721 COG3Q96JB2 828 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms