RNA–Protein interactions for RNA: ENST00000569251.5

SCAMP2-211, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 867 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-211ENST00000569251 L3MBTL2Q969R5 705 aa18.63■□□□□ 0.57
SCAMP2-211ENST00000569251 TRPM1Q7Z4N2 1603 aa18.63■□□□□ 0.57
SCAMP2-211ENST00000569251 FAM83GA6ND36 823 aa18.62■□□□□ 0.57
SCAMP2-211ENST00000569251 VPS72Q15906 364 aa18.61■□□□□ 0.57
SCAMP2-211ENST00000569251 SIN3AQ96ST3 1273 aa18.61■□□□□ 0.57
SCAMP2-211ENST00000569251 PHRF1Q9P1Y6 1649 aaKnown RBP18.6■□□□□ 0.57
SCAMP2-211ENST00000569251 POLR3AO14802 1390 aaPredicted RBP18.6■□□□□ 0.57
SCAMP2-211ENST00000569251 CCDC61Q9Y6R9 512 aa18.6■□□□□ 0.57
SCAMP2-211ENST00000569251 PAK3O75914 559 aaPredicted RBP18.59■□□□□ 0.57
SCAMP2-211ENST00000569251 CENPJQ9HC77 1338 aaPredicted RBP18.58■□□□□ 0.57
SCAMP2-211ENST00000569251 PLEKHG3A1L390 1219 aa18.58■□□□□ 0.56
SCAMP2-211ENST00000569251 ACEP12821 1306 aa18.57■□□□□ 0.56
SCAMP2-211ENST00000569251 ONECUT3O60422 494 aaPredicted RBP18.56■□□□□ 0.56
SCAMP2-211ENST00000569251 NBPF8Q3BBV2 869 aa18.56■□□□□ 0.56
SCAMP2-211ENST00000569251 BTG4Q9NY30 223 aa18.56■□□□□ 0.56
SCAMP2-211ENST00000569251 NEUROD1Q13562 356 aa18.54■□□□□ 0.56
SCAMP2-211ENST00000569251 SEPT12Q8IYM1 358 aa18.54■□□□□ 0.56
SCAMP2-211ENST00000569251 PPIP5K1Q6PFW1 1433 aa18.53■□□□□ 0.56
SCAMP2-211ENST00000569251 CCDC125Q86Z20 511 aa18.53■□□□□ 0.56
SCAMP2-211ENST00000569251 CCDC9Q9Y3X0 531 aaKnown RBP18.53■□□□□ 0.56
SCAMP2-211ENST00000569251 SRPK2P78362 688 aaKnown RBP18.52■□□□□ 0.56
SCAMP2-211ENST00000569251 CABP2Q9NPB3 220 aa18.52■□□□□ 0.56
SCAMP2-211ENST00000569251 PRDM11Q9NQV5 511 aa18.51■□□□□ 0.55
SCAMP2-211ENST00000569251 NRKQ7Z2Y5 1582 aa18.51■□□□□ 0.55
SCAMP2-211ENST00000569251 KIAA0232Q92628 1395 aa18.5■□□□□ 0.55
SCAMP2-211ENST00000569251 NUTM2GQ5VZR2 741 aa18.49■□□□□ 0.55
SCAMP2-211ENST00000569251 ROCK2O75116 1388 aaKnown RBP18.49■□□□□ 0.55
SCAMP2-211ENST00000569251 AKAP12Q02952 1782 aa18.49■□□□□ 0.55
SCAMP2-211ENST00000569251 SPATA31A5Q5VU36 1347 aa18.49■□□□□ 0.55
SCAMP2-211ENST00000569251 SPATA31A7Q8IWB4 1347 aa18.49■□□□□ 0.55
SCAMP2-211ENST00000569251 KRT27Q7Z3Y8 459 aa18.48■□□□□ 0.55
SCAMP2-211ENST00000569251 ABTB2Q8N961 1025 aa18.48■□□□□ 0.55
SCAMP2-211ENST00000569251 BLMP54132 1417 aaPredicted RBP18.48■□□□□ 0.55
SCAMP2-211ENST00000569251 THSD7AQ9UPZ6 1657 aa18.47■□□□□ 0.55
SCAMP2-211ENST00000569251 FAM98CQ17RN3 349 aaKnown RBP18.47■□□□□ 0.55
SCAMP2-211ENST00000569251 LMO7Q8WWI1 1683 aa18.47■□□□□ 0.55
SCAMP2-211ENST00000569251 BRD4O60885 1362 aaPredicted RBP18.46■□□□□ 0.55
SCAMP2-211ENST00000569251 ZC3H6P61129 1189 aaKnown RBP18.46■□□□□ 0.55
SCAMP2-211ENST00000569251 CHRNA2Q15822 529 aa18.46■□□□□ 0.55
SCAMP2-211ENST00000569251 CABP1Q9NZU7 370 aa18.46■□□□□ 0.55
SCAMP2-211ENST00000569251 USP19O94966 1318 aa18.46■□□□□ 0.55
SCAMP2-211ENST00000569251 EVC2Q86UK5 1308 aa18.46■□□□□ 0.55
SCAMP2-211ENST00000569251 USP6P35125 1406 aa18.44■□□□□ 0.54
SCAMP2-211ENST00000569251 PIK3C2AO00443 1686 aa18.44■□□□□ 0.54
SCAMP2-211ENST00000569251 CAMTA1Q9Y6Y1 1673 aa18.44■□□□□ 0.54
SCAMP2-211ENST00000569251 CPDO75976 1380 aa18.43■□□□□ 0.54
SCAMP2-211ENST00000569251 NLRP13Q86W25 1043 aa18.43■□□□□ 0.54
SCAMP2-211ENST00000569251 SSH2Q76I76 1423 aa18.42■□□□□ 0.54
SCAMP2-211ENST00000569251 A0A0G2JS52 829 aa18.42■□□□□ 0.54
SCAMP2-211ENST00000569251 MYT1Q01538 1121 aa18.42■□□□□ 0.54
SCAMP2-211ENST00000569251 RGPD1P0DJD0 1748 aa18.42■□□□□ 0.54
SCAMP2-211ENST00000569251 SPATA31A1Q5TZJ5 1347 aa18.42■□□□□ 0.54
SCAMP2-211ENST00000569251 SLIT3O75094 1523 aa18.4■□□□□ 0.54
SCAMP2-211ENST00000569251 GCP02774 474 aa18.4■□□□□ 0.54
SCAMP2-211ENST00000569251 STRN4Q9NRL3 753 aa18.4■□□□□ 0.54
SCAMP2-211ENST00000569251 COL18A1P39060 1754 aa18.4■□□□□ 0.54
SCAMP2-211ENST00000569251 DEFB132Q7Z7B7 95 aa18.39■□□□□ 0.53
SCAMP2-211ENST00000569251 ZRANB1Q9UGI0 708 aa18.39■□□□□ 0.53
SCAMP2-211ENST00000569251 MON2Q7Z3U7 1717 aa18.39■□□□□ 0.53
SCAMP2-211ENST00000569251 RGPD5Q99666 1765 aa18.39■□□□□ 0.53
SCAMP2-211ENST00000569251 SBNO2Q9Y2G9 1366 aa18.39■□□□□ 0.53
SCAMP2-211ENST00000569251 TNS1Q9HBL0 1735 aaKnown RBP18.38■□□□□ 0.53
SCAMP2-211ENST00000569251 SF3B2Q13435 895 aaKnown RBP18.38■□□□□ 0.53
SCAMP2-211ENST00000569251 NLRP6P59044 892 aa18.37■□□□□ 0.53
SCAMP2-211ENST00000569251 TONSLQ96HA7 1378 aa18.37■□□□□ 0.53
SCAMP2-211ENST00000569251 EVA1CP58658 441 aa18.36■□□□□ 0.53
SCAMP2-211ENST00000569251 CPSF1Q10570 1443 aaKnown RBP18.36■□□□□ 0.53
SCAMP2-211ENST00000569251 TRIM26Q12899 539 aaPredicted RBP18.36■□□□□ 0.53
SCAMP2-211ENST00000569251 ZNF692Q9BU19 519 aaPredicted RBP18.36■□□□□ 0.53
SCAMP2-211ENST00000569251 CARD11Q9BXL7 1154 aa18.36■□□□□ 0.53
SCAMP2-211ENST00000569251 COL5A2P05997 1499 aaPredicted RBP18.35■□□□□ 0.53
SCAMP2-211ENST00000569251 FAM182BQ5T319 152 aa18.35■□□□□ 0.53
SCAMP2-211ENST00000569251 LARP1Q6PKG0 1096 aaKnown RBP18.35■□□□□ 0.53
SCAMP2-211ENST00000569251 PARP4Q9UKK3 1724 aaKnown RBP18.35■□□□□ 0.53
SCAMP2-211ENST00000569251 TTC21BQ7Z4L5 1316 aa18.34■□□□□ 0.53
SCAMP2-211ENST00000569251 BARGINQ6ZT62 677 aa18.34■□□□□ 0.53
SCAMP2-211ENST00000569251 USP35Q9P2H5 1018 aa18.34■□□□□ 0.53
SCAMP2-211ENST00000569251 WNK3Q9BYP7 1800 aa18.33■□□□□ 0.52
SCAMP2-211ENST00000569251 AATKQ6ZMQ8 1374 aa18.32■□□□□ 0.52
SCAMP2-211ENST00000569251 USP54Q70EL1 1684 aa18.32■□□□□ 0.52
SCAMP2-211ENST00000569251 TTC21AQ8NDW8 1320 aa18.31■□□□□ 0.52
SCAMP2-211ENST00000569251 BAG6P46379 1132 aa18.31■□□□□ 0.52
SCAMP2-211ENST00000569251 TCP11L2Q8N4U5 519 aa18.31■□□□□ 0.52
SCAMP2-211ENST00000569251 KTN1Q86UP2 1357 aaKnown RBP18.3■□□□□ 0.52
SCAMP2-211ENST00000569251 CD163L1Q9NR16 1453 aa18.3■□□□□ 0.52
SCAMP2-211ENST00000569251 SBF2Q86WG5 1849 aa18.3■□□□□ 0.52
SCAMP2-211ENST00000569251 THRAP3Q9Y2W1 955 aaKnown RBP18.29■□□□□ 0.52
SCAMP2-211ENST00000569251 DISP2A7MBM2 1401 aa18.29■□□□□ 0.52
SCAMP2-211ENST00000569251 CRB1P82279 1406 aa18.29■□□□□ 0.52
SCAMP2-211ENST00000569251 NFAT5O94916 1531 aa18.28■□□□□ 0.52
SCAMP2-211ENST00000569251 LTN1O94822 1766 aa18.28■□□□□ 0.52
SCAMP2-211ENST00000569251 ZBTB7CA1YPR0 619 aa18.28■□□□□ 0.52
SCAMP2-211ENST00000569251 FAM196AQ6ZSG2 479 aa18.28■□□□□ 0.52
SCAMP2-211ENST00000569251 ARHGEF25Q86VW2 580 aa18.27■□□□□ 0.52
SCAMP2-211ENST00000569251 KCNH5Q8NCM2 988 aa18.27■□□□□ 0.52
SCAMP2-211ENST00000569251 EN1Q05925 392 aaPredicted RBP18.26■□□□□ 0.51
SCAMP2-211ENST00000569251 PDE3BQ13370 1112 aa18.26■□□□□ 0.51
SCAMP2-211ENST00000569251 AXIN2Q9Y2T1 843 aa18.26■□□□□ 0.51
SCAMP2-211ENST00000569251 PEAK1Q9H792 1746 aa18.26■□□□□ 0.51
SCAMP2-211ENST00000569251 LRRC37A3O60309 1634 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms