RNA–Protein interactions for RNA: ENST00000569222.5

KIFC3-233, Transcript of kinesin family member C3, human

TSL 3

Gene KIFC3, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-233	ENST00000569222	NUTM2A	Q8IVF1	878 aa	Predicted RBP	18.98	■□□□□ 0.63
KIFC3-233	ENST00000569222	CABP1	Q9NZU7	370 aa		18.98	■□□□□ 0.63
KIFC3-233	ENST00000569222	USP54	Q70EL1	1684 aa		18.98	■□□□□ 0.63
KIFC3-233	ENST00000569222	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	18.97	■□□□□ 0.63
KIFC3-233	ENST00000569222	PHF23	Q9BUL5	403 aa	Predicted RBP	18.96	■□□□□ 0.63
KIFC3-233	ENST00000569222	PLCH1	Q4KWH8	1693 aa		18.95	■□□□□ 0.62
KIFC3-233	ENST00000569222	ILDR2	Q71H61	639 aa		18.95	■□□□□ 0.62
KIFC3-233	ENST00000569222	NINL	Q9Y2I6	1382 aa		18.94	■□□□□ 0.62
KIFC3-233	ENST00000569222	USP19	O94966	1318 aa		18.94	■□□□□ 0.62
KIFC3-233	ENST00000569222	SLIT3	O75094	1523 aa		18.94	■□□□□ 0.62
KIFC3-233	ENST00000569222	SLIT2	O94813	1529 aa		18.94	■□□□□ 0.62
KIFC3-233	ENST00000569222	NWD2	Q9ULI1	1742 aa		18.94	■□□□□ 0.62
KIFC3-233	ENST00000569222	NRAP	Q86VF7	1730 aa		18.93	■□□□□ 0.62
KIFC3-233	ENST00000569222	SLC24A1	O60721	1099 aa		18.92	■□□□□ 0.62
KIFC3-233	ENST00000569222	ADAMTS2	O95450	1211 aa		18.92	■□□□□ 0.62
KIFC3-233	ENST00000569222	MEX3C	Q5U5Q3	659 aa	Known RBP	18.92	■□□□□ 0.62
KIFC3-233	ENST00000569222	POTEA	Q6S8J7	498 aa		18.92	■□□□□ 0.62
KIFC3-233	ENST00000569222	AFF2	P51816	1311 aa		18.92	■□□□□ 0.62
KIFC3-233	ENST00000569222		A0A1W2PP64	1363 aa		18.92	■□□□□ 0.62
KIFC3-233	ENST00000569222	BCL9L	Q86UU0	1499 aa		18.91	■□□□□ 0.62
KIFC3-233	ENST00000569222	FNBP4	Q8N3X1	1017 aa	Predicted RBP	18.91	■□□□□ 0.62
KIFC3-233	ENST00000569222	CABLES1	Q8TDN4	633 aa		18.91	■□□□□ 0.62
KIFC3-233	ENST00000569222	C8orf37	Q96NL8	207 aa		18.9	■□□□□ 0.62
KIFC3-233	ENST00000569222	COL14A1	Q05707	1796 aa	Known RBP	18.9	■□□□□ 0.62
KIFC3-233	ENST00000569222	TMF1	P82094	1093 aa		18.89	■□□□□ 0.61
KIFC3-233	ENST00000569222	PAK3	O75914	559 aa	Predicted RBP	18.88	■□□□□ 0.61
KIFC3-233	ENST00000569222	LMOD2	Q6P5Q4	547 aa		18.88	■□□□□ 0.61
KIFC3-233	ENST00000569222	KTN1	Q86UP2	1357 aa	Known RBP	18.88	■□□□□ 0.61
KIFC3-233	ENST00000569222	ATRN	O75882	1429 aa		18.88	■□□□□ 0.61
KIFC3-233	ENST00000569222	EDC4	Q6P2E9	1401 aa	Known RBP	18.88	■□□□□ 0.61
KIFC3-233	ENST00000569222	LMO7	Q8WWI1	1683 aa		18.88	■□□□□ 0.61
KIFC3-233	ENST00000569222	HSPA5	P11021	654 aa	Known RBP	18.87	■□□□□ 0.61
KIFC3-233	ENST00000569222	ZNF772	Q68DY9	489 aa	Predicted RBP	18.87	■□□□□ 0.61
KIFC3-233	ENST00000569222	TTC21B	Q7Z4L5	1316 aa		18.87	■□□□□ 0.61
KIFC3-233	ENST00000569222	ZNF692	Q9BU19	519 aa	Predicted RBP	18.87	■□□□□ 0.61
KIFC3-233	ENST00000569222	SLC12A5	Q9H2X9	1139 aa		18.87	■□□□□ 0.61
KIFC3-233	ENST00000569222	NFAT5	O94916	1531 aa		18.86	■□□□□ 0.61
KIFC3-233	ENST00000569222	ANKRD36B	Q8N2N9	1353 aa		18.86	■□□□□ 0.61
KIFC3-233	ENST00000569222	EIF4G2	P78344	907 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
KIFC3-233	ENST00000569222	TTC21A	Q8NDW8	1320 aa		18.85	■□□□□ 0.61
KIFC3-233	ENST00000569222	CDK12	Q9NYV4	1490 aa	Predicted RBP	18.84	■□□□□ 0.61
KIFC3-233	ENST00000569222	CPD	O75976	1380 aa		18.84	■□□□□ 0.61
KIFC3-233	ENST00000569222	NGLY1	Q96IV0	654 aa		18.84	■□□□□ 0.61
KIFC3-233	ENST00000569222	OVOS2	A0A0J9YW53	1432 aa		18.83	■□□□□ 0.61
KIFC3-233	ENST00000569222	OVOS2	Q6IE36	1432 aa		18.83	■□□□□ 0.61
KIFC3-233	ENST00000569222	USP31	Q70CQ4	1352 aa		18.83	■□□□□ 0.61
KIFC3-233	ENST00000569222	NUTM2G	Q5VZR2	741 aa		18.83	■□□□□ 0.6
KIFC3-233	ENST00000569222	ABTB2	Q8N961	1025 aa		18.83	■□□□□ 0.6
KIFC3-233	ENST00000569222	GLI3	P10071	1580 aa		18.83	■□□□□ 0.6
KIFC3-233	ENST00000569222	KIAA0232	Q92628	1395 aa		18.82	■□□□□ 0.6
KIFC3-233	ENST00000569222	TMC1	Q8TDI8	760 aa		18.82	■□□□□ 0.6
KIFC3-233	ENST00000569222	COL18A1	P39060	1754 aa		18.81	■□□□□ 0.6
KIFC3-233	ENST00000569222	CDCA8	Q53HL2	280 aa		18.81	■□□□□ 0.6
KIFC3-233	ENST00000569222	TERF2IP	Q9NYB0	399 aa		18.81	■□□□□ 0.6
KIFC3-233	ENST00000569222	FAM83G	A6ND36	823 aa		18.8	■□□□□ 0.6
KIFC3-233	ENST00000569222	USP21	Q9UK80	565 aa		18.8	■□□□□ 0.6
KIFC3-233	ENST00000569222	ABCC6	O95255	1503 aa		18.79	■□□□□ 0.6
KIFC3-233	ENST00000569222	PLEKHG5	O94827	1062 aa		18.79	■□□□□ 0.6
KIFC3-233	ENST00000569222	HAP1	P54257	671 aa	Predicted RBP	18.79	■□□□□ 0.6
KIFC3-233	ENST00000569222	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	18.79	■□□□□ 0.6
KIFC3-233	ENST00000569222	NLRP13	Q86W25	1043 aa		18.79	■□□□□ 0.6
KIFC3-233	ENST00000569222	EP400	Q96L91	3159 aa		18.79	■□□□□ 0.6
KIFC3-233	ENST00000569222	RGS12	O14924	1447 aa		18.79	■□□□□ 0.6
KIFC3-233	ENST00000569222	KIF20B	Q96Q89	1820 aa		18.79	■□□□□ 0.6
KIFC3-233	ENST00000569222	CAMTA1	Q9Y6Y1	1673 aa		18.78	■□□□□ 0.6
KIFC3-233	ENST00000569222	GC	P02774	474 aa		18.77	■□□□□ 0.6
KIFC3-233	ENST00000569222	UNC5CL	Q8IV45	518 aa		18.77	■□□□□ 0.6
KIFC3-233	ENST00000569222	C11orf95	C9JLR9	678 aa	Predicted RBP	18.76	■□□□□ 0.59
KIFC3-233	ENST00000569222	NLRP6	P59044	892 aa		18.76	■□□□□ 0.59
KIFC3-233	ENST00000569222	NME9	Q86XW9	330 aa		18.76	■□□□□ 0.59
KIFC3-233	ENST00000569222	QTRT2	Q9H974	415 aa	Known RBP	18.75	■□□□□ 0.59
KIFC3-233	ENST00000569222	PRDM11	Q9NQV5	511 aa		18.75	■□□□□ 0.59
KIFC3-233	ENST00000569222	ZRANB1	Q9UGI0	708 aa		18.75	■□□□□ 0.59
KIFC3-233	ENST00000569222	TRPC5	Q9UL62	973 aa	Predicted RBP	18.75	■□□□□ 0.59
KIFC3-233	ENST00000569222	LTN1	O94822	1766 aa		18.74	■□□□□ 0.59
KIFC3-233	ENST00000569222	RBM6	P78332	1123 aa	Known RBP	18.74	■□□□□ 0.59
KIFC3-233	ENST00000569222	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	18.74	■□□□□ 0.59
KIFC3-233	ENST00000569222	COL5A2	P05997	1499 aa	Predicted RBP	18.73	■□□□□ 0.59
KIFC3-233	ENST00000569222	AATK	Q6ZMQ8	1374 aa		18.73	■□□□□ 0.59
KIFC3-233	ENST00000569222	RXRB	P28702	533 aa		18.72	■□□□□ 0.59
KIFC3-233	ENST00000569222	ZC3H6	P61129	1189 aa	Known RBP	18.72	■□□□□ 0.59
KIFC3-233	ENST00000569222	VPS72	Q15906	364 aa		18.72	■□□□□ 0.59
KIFC3-233	ENST00000569222	CARD14	Q9BXL6	1004 aa		18.72	■□□□□ 0.59
KIFC3-233	ENST00000569222	BTG4	Q9NY30	223 aa		18.72	■□□□□ 0.59
KIFC3-233	ENST00000569222	NSD3	Q9BZ95	1437 aa		18.72	■□□□□ 0.59
KIFC3-233	ENST00000569222	THSD7A	Q9UPZ6	1657 aa		18.72	■□□□□ 0.59
KIFC3-233	ENST00000569222	CHRNA2	Q15822	529 aa		18.71	■□□□□ 0.59
KIFC3-233	ENST00000569222	ANKRD26	Q9UPS8	1709 aa		18.71	■□□□□ 0.59
KIFC3-233	ENST00000569222	KIF7	Q2M1P5	1343 aa		18.71	■□□□□ 0.59
KIFC3-233	ENST00000569222	ARHGEF25	Q86VW2	580 aa		18.7	■□□□□ 0.58
KIFC3-233	ENST00000569222	RGPD5	Q99666	1765 aa		18.7	■□□□□ 0.58
KIFC3-233	ENST00000569222	SOCS7	O14512	581 aa		18.69	■□□□□ 0.58
KIFC3-233	ENST00000569222	KCNH5	Q8NCM2	988 aa		18.69	■□□□□ 0.58
KIFC3-233	ENST00000569222	GJD4	Q96KN9	370 aa	Predicted RBP	18.69	■□□□□ 0.58
KIFC3-233	ENST00000569222	SPATA31A5	Q5VU36	1347 aa		18.67	■□□□□ 0.58
KIFC3-233	ENST00000569222	SPATA31A7	Q8IWB4	1347 aa		18.67	■□□□□ 0.58
KIFC3-233	ENST00000569222	BRWD3	Q6RI45	1802 aa		18.67	■□□□□ 0.58
KIFC3-233	ENST00000569222	WNK3	Q9BYP7	1800 aa		18.67	■□□□□ 0.58
KIFC3-233	ENST00000569222	FYB1	O15117	783 aa		18.66	■□□□□ 0.58
KIFC3-233	ENST00000569222	CCDC7	Q96M83	1385 aa		18.65	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms