RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 CCDC61Q9Y6R9 512 aa30.57■■■□□ 2.48
LINC00543-201ENST00000567234 MON2Q7Z3U7 1717 aa30.56■■■□□ 2.48
LINC00543-201ENST00000567234 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.56■■■□□ 2.48
LINC00543-201ENST00000567234 DUSP27Q5VZP5 1158 aa30.56■■■□□ 2.48
LINC00543-201ENST00000567234 RUNDC1Q96C34 613 aa30.56■■■□□ 2.48
LINC00543-201ENST00000567234 NUDT16Q96DE0 195 aaKnown RBP30.56■■■□□ 2.48
LINC00543-201ENST00000567234 AKAP12Q02952 1782 aa30.56■■■□□ 2.48
LINC00543-201ENST00000567234 NCBP3Q53F19 620 aaKnown RBP30.55■■■□□ 2.48
LINC00543-201ENST00000567234 TRMT2AQ8IZ69 625 aaKnown RBP30.54■■■□□ 2.48
LINC00543-201ENST00000567234 SLFN5Q08AF3 891 aa30.54■■■□□ 2.48
LINC00543-201ENST00000567234 ITSN1Q15811 1721 aa30.53■■■□□ 2.48
LINC00543-201ENST00000567234 PIK3R4Q99570 1358 aa30.53■■■□□ 2.48
LINC00543-201ENST00000567234 KCNA6P17658 529 aa30.53■■■□□ 2.48
LINC00543-201ENST00000567234 STRCQ7RTU9 1775 aa30.53■■■□□ 2.48
LINC00543-201ENST00000567234 PTCH1Q13635 1447 aa30.52■■■□□ 2.48
LINC00543-201ENST00000567234 COL3A1P02461 1466 aaPredicted RBP30.52■■■□□ 2.48
LINC00543-201ENST00000567234 IQSEC2Q5JU85 1478 aa30.52■■■□□ 2.48
LINC00543-201ENST00000567234 ZNF692Q9BU19 519 aaPredicted RBP30.49■■■□□ 2.47
LINC00543-201ENST00000567234 TOPAZ1Q8N9V7 1692 aa30.49■■■□□ 2.47
LINC00543-201ENST00000567234 PNPLA6Q8IY17 1366 aa30.49■■■□□ 2.47
LINC00543-201ENST00000567234 E9PSI1 815 aa30.48■■■□□ 2.47
LINC00543-201ENST00000567234 PRR36Q9H6K5 1346 aa30.44■■■□□ 2.46
LINC00543-201ENST00000567234 CCDC27Q2M243 656 aa30.44■■■□□ 2.46
LINC00543-201ENST00000567234 B4GALNT3Q6L9W6 998 aa30.44■■■□□ 2.46
LINC00543-201ENST00000567234 PHF23Q9BUL5 403 aaPredicted RBP30.44■■■□□ 2.46
LINC00543-201ENST00000567234 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.43■■■□□ 2.46
LINC00543-201ENST00000567234 WWC1Q8IX03 1113 aa30.43■■■□□ 2.46
LINC00543-201ENST00000567234 MAP2P11137 1827 aaKnown RBP30.43■■■□□ 2.46
LINC00543-201ENST00000567234 TCP11L2Q8N4U5 519 aa30.43■■■□□ 2.46
LINC00543-201ENST00000567234 NKTRP30414 1462 aaKnown RBP30.42■■■□□ 2.46
LINC00543-201ENST00000567234 U2AF1L5P0DN76 240 aaPredicted RBP30.42■■■□□ 2.46
LINC00543-201ENST00000567234 U2AF1Q01081 240 aaKnown RBP eCLIP30.42■■■□□ 2.46
LINC00543-201ENST00000567234 RBM33Q96EV2 1170 aaKnown RBP30.41■■■□□ 2.46
LINC00543-201ENST00000567234 NWD1Q149M9 1564 aa30.4■■■□□ 2.46
LINC00543-201ENST00000567234 PLEKHG3A1L390 1219 aa30.4■■■□□ 2.46
LINC00543-201ENST00000567234 AATKQ6ZMQ8 1374 aa30.39■■■□□ 2.46
LINC00543-201ENST00000567234 STRCP1A6NGW2 1772 aa30.39■■■□□ 2.45
LINC00543-201ENST00000567234 WDR63Q8IWG1 891 aa30.38■■■□□ 2.45
LINC00543-201ENST00000567234 NRKQ7Z2Y5 1582 aa30.36■■■□□ 2.45
LINC00543-201ENST00000567234 DIAPH1O60610 1272 aaKnown RBP30.36■■■□□ 2.45
LINC00543-201ENST00000567234 CCDC136Q96JN2 1154 aa30.36■■■□□ 2.45
LINC00543-201ENST00000567234 NALCNQ8IZF0 1738 aa30.36■■■□□ 2.45
LINC00543-201ENST00000567234 PNNQ9H307 717 aaKnown RBP30.36■■■□□ 2.45
LINC00543-201ENST00000567234 SPINK5Q9NQ38 1064 aaPredicted RBP30.36■■■□□ 2.45
LINC00543-201ENST00000567234 POLKQ9UBT6 870 aa30.35■■■□□ 2.45
LINC00543-201ENST00000567234 NME9Q86XW9 330 aa30.33■■■□□ 2.45
LINC00543-201ENST00000567234 PLEKHF1Q96S99 279 aa30.33■■■□□ 2.45
LINC00543-201ENST00000567234 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.32■■■□□ 2.44
LINC00543-201ENST00000567234 COG3Q96JB2 828 aa30.32■■■□□ 2.44
LINC00543-201ENST00000567234 NUTM2FA1L443 756 aa30.31■■■□□ 2.44
LINC00543-201ENST00000567234 CDK12Q9NYV4 1490 aaPredicted RBP30.31■■■□□ 2.44
LINC00543-201ENST00000567234 U2SURPO15042 1029 aaKnown RBP30.31■■■□□ 2.44
LINC00543-201ENST00000567234 EXOC6Q8TAG9 804 aa30.31■■■□□ 2.44
LINC00543-201ENST00000567234 DMRT2Q9Y5R5 561 aa30.31■■■□□ 2.44
LINC00543-201ENST00000567234 ACEP12821 1306 aa30.29■■■□□ 2.44
LINC00543-201ENST00000567234 USP6P35125 1406 aa30.29■■■□□ 2.44
LINC00543-201ENST00000567234 RRP7AQ9Y3A4 280 aaKnown RBP30.27■■■□□ 2.44
LINC00543-201ENST00000567234 RGPD8O14715 1765 aaPredicted RBP30.27■■■□□ 2.44
LINC00543-201ENST00000567234 TTC21BQ7Z4L5 1316 aa30.27■■■□□ 2.44
LINC00543-201ENST00000567234 NEUROD2Q15784 382 aa30.26■■■□□ 2.44
LINC00543-201ENST00000567234 ANKARQ7Z5J8 1434 aa30.26■■■□□ 2.43
LINC00543-201ENST00000567234 PLIN1O60240 522 aa30.26■■■□□ 2.43
LINC00543-201ENST00000567234 FCHSD2O94868 740 aa30.26■■■□□ 2.43
LINC00543-201ENST00000567234 MAPK8IP3Q9UPT6 1336 aa30.25■■■□□ 2.43
LINC00543-201ENST00000567234 SSH2Q76I76 1423 aa30.24■■■□□ 2.43
LINC00543-201ENST00000567234 PROSER2Q86WR7 435 aaPredicted RBP30.23■■■□□ 2.43
LINC00543-201ENST00000567234 FMN2Q9NZ56 1722 aa30.23■■■□□ 2.43
LINC00543-201ENST00000567234 TMPOP42166 694 aaKnown RBP30.22■■■□□ 2.43
LINC00543-201ENST00000567234 ZRANB1Q9UGI0 708 aa30.22■■■□□ 2.43
LINC00543-201ENST00000567234 ADGRL3Q9HAR2 1447 aa30.22■■■□□ 2.43
LINC00543-201ENST00000567234 DEKP35659 375 aaKnown RBP30.22■■■□□ 2.43
LINC00543-201ENST00000567234 OVOS2A0A0J9YW53 1432 aa30.21■■■□□ 2.43
LINC00543-201ENST00000567234 OVOS2Q6IE36 1432 aa30.21■■■□□ 2.43
LINC00543-201ENST00000567234 TTC21AQ8NDW8 1320 aa30.2■■■□□ 2.43
LINC00543-201ENST00000567234 MYH16Q9H6N6 1097 aa30.2■■■□□ 2.43
LINC00543-201ENST00000567234 EMILIN1Q9Y6C2 1016 aa30.19■■■□□ 2.42
LINC00543-201ENST00000567234 LRRC7Q96NW7 1537 aa30.19■■■□□ 2.42
LINC00543-201ENST00000567234 ZNF335Q9H4Z2 1342 aaPredicted RBP30.18■■■□□ 2.42
LINC00543-201ENST00000567234 PPM1GO15355 546 aaPredicted RBP30.18■■■□□ 2.42
LINC00543-201ENST00000567234 FBLN1P23142 703 aa30.18■■■□□ 2.42
LINC00543-201ENST00000567234 CRBNQ96SW2 442 aa30.18■■■□□ 2.42
LINC00543-201ENST00000567234 C14orf37Q86TY3 774 aa30.17■■■□□ 2.42
LINC00543-201ENST00000567234 NOP58Q9Y2X3 529 aaKnown RBP30.17■■■□□ 2.42
LINC00543-201ENST00000567234 IL13P35225 146 aa30.17■■■□□ 2.42
LINC00543-201ENST00000567234 RSPH6AQ9H0K4 717 aa30.17■■■□□ 2.42
LINC00543-201ENST00000567234 IL16Q14005 1332 aa30.16■■■□□ 2.42
LINC00543-201ENST00000567234 USP31Q70CQ4 1352 aa30.16■■■□□ 2.42
LINC00543-201ENST00000567234 TMEM94Q12767 1356 aa30.15■■■□□ 2.42
LINC00543-201ENST00000567234 XIRP1Q702N8 1843 aaKnown RBP30.14■■■□□ 2.42
LINC00543-201ENST00000567234 NEFMP07197 916 aa30.14■■■□□ 2.42
LINC00543-201ENST00000567234 TRIM35Q9UPQ4 493 aa30.14■■■□□ 2.42
LINC00543-201ENST00000567234 CT47B1P0C2W7 299 aaPredicted RBP30.12■■■□□ 2.41
LINC00543-201ENST00000567234 C20orf194Q5TEA3 1177 aa30.12■■■□□ 2.41
LINC00543-201ENST00000567234 RIPK4P57078 832 aa30.1■■■□□ 2.41
LINC00543-201ENST00000567234 NGDNQ8NEJ9 315 aaKnown RBP30.1■■■□□ 2.41
LINC00543-201ENST00000567234 BCAR3O75815 825 aa30.09■■■□□ 2.41
LINC00543-201ENST00000567234 PRKAR2BP31323 418 aa30.09■■■□□ 2.41
LINC00543-201ENST00000567234 RRS1Q15050 365 aaKnown RBP30.09■■■□□ 2.41
LINC00543-201ENST00000567234 PMFBP1Q8TBY8 1022 aa30.09■■■□□ 2.41
LINC00543-201ENST00000567234 PDE3AQ14432 1141 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms