RNA–Protein interactions for RNA: ENST00000566833.1

CCNDBP1-209, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-209ENST00000566833 TNS3Q68CZ2 1445 aa18.62■□□□□ 0.57
CCNDBP1-209ENST00000566833 CD163L1Q9NR16 1453 aa18.62■□□□□ 0.57
CCNDBP1-209ENST00000566833 MON2Q7Z3U7 1717 aa18.62■□□□□ 0.57
CCNDBP1-209ENST00000566833 TRPM3Q9HCF6 1732 aaPredicted RBP18.61■□□□□ 0.57
CCNDBP1-209ENST00000566833 JCADQ9P266 1359 aa18.61■□□□□ 0.57
CCNDBP1-209ENST00000566833 SPATA31A3Q5VYP0 1347 aa18.61■□□□□ 0.57
CCNDBP1-209ENST00000566833 ARHGEF10O15013 1369 aa18.6■□□□□ 0.57
CCNDBP1-209ENST00000566833 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.59■□□□□ 0.57
CCNDBP1-209ENST00000566833 EDC4Q6P2E9 1401 aaKnown RBP18.58■□□□□ 0.57
CCNDBP1-209ENST00000566833 TTC21BQ7Z4L5 1316 aa18.58■□□□□ 0.57
CCNDBP1-209ENST00000566833 TTC21AQ8NDW8 1320 aa18.58■□□□□ 0.57
CCNDBP1-209ENST00000566833 PLEKHG5O94827 1062 aa18.58■□□□□ 0.56
CCNDBP1-209ENST00000566833 ABTB2Q8N961 1025 aa18.58■□□□□ 0.56
CCNDBP1-209ENST00000566833 PNPLA6Q8IY17 1366 aa18.57■□□□□ 0.56
CCNDBP1-209ENST00000566833 SHPRHQ149N8 1683 aa18.57■□□□□ 0.56
CCNDBP1-209ENST00000566833 PANK3Q9H999 370 aa18.57■□□□□ 0.56
CCNDBP1-209ENST00000566833 NRKQ7Z2Y5 1582 aa18.56■□□□□ 0.56
CCNDBP1-209ENST00000566833 ZNF316A6NFI3 1004 aaPredicted RBP18.56■□□□□ 0.56
CCNDBP1-209ENST00000566833 HAP1P54257 671 aaPredicted RBP18.56■□□□□ 0.56
CCNDBP1-209ENST00000566833 ALS2Q96Q42 1657 aa18.56■□□□□ 0.56
CCNDBP1-209ENST00000566833 NSD3Q9BZ95 1437 aa18.56■□□□□ 0.56
CCNDBP1-209ENST00000566833 NUTM2GQ5VZR2 741 aa18.55■□□□□ 0.56
CCNDBP1-209ENST00000566833 SSH2Q76I76 1423 aa18.55■□□□□ 0.56
CCNDBP1-209ENST00000566833 SPATA31A6Q5VVP1 1343 aa18.53■□□□□ 0.56
CCNDBP1-209ENST00000566833 NUTM2BA6NNL0 878 aaPredicted RBP18.53■□□□□ 0.56
CCNDBP1-209ENST00000566833 NUTM2EB1AL46 878 aaPredicted RBP18.53■□□□□ 0.56
CCNDBP1-209ENST00000566833 NLRP6P59044 892 aa18.53■□□□□ 0.56
CCNDBP1-209ENST00000566833 NLRP13Q86W25 1043 aa18.53■□□□□ 0.56
CCNDBP1-209ENST00000566833 NUTM2AQ8IVF1 878 aaPredicted RBP18.53■□□□□ 0.56
CCNDBP1-209ENST00000566833 COL22A1Q8NFW1 1626 aaPredicted RBP18.52■□□□□ 0.56
CCNDBP1-209ENST00000566833 CARD14Q9BXL6 1004 aa18.52■□□□□ 0.56
CCNDBP1-209ENST00000566833 KNSTRNQ9Y448 316 aa18.52■□□□□ 0.56
CCNDBP1-209ENST00000566833 PIK3C2AO00443 1686 aa18.51■□□□□ 0.55
CCNDBP1-209ENST00000566833 NME9Q86XW9 330 aa18.51■□□□□ 0.55
CCNDBP1-209ENST00000566833 CGNL1Q0VF96 1302 aa18.5■□□□□ 0.55
CCNDBP1-209ENST00000566833 CABLES1Q8TDN4 633 aa18.5■□□□□ 0.55
CCNDBP1-209ENST00000566833 KIF20BQ96Q89 1820 aa18.49■□□□□ 0.55
CCNDBP1-209ENST00000566833 MED1Q15648 1581 aaPredicted RBP18.48■□□□□ 0.55
CCNDBP1-209ENST00000566833 MEX3CQ5U5Q3 659 aaKnown RBP18.48■□□□□ 0.55
CCNDBP1-209ENST00000566833 COG3Q96JB2 828 aa18.48■□□□□ 0.55
CCNDBP1-209ENST00000566833 DDX10Q13206 875 aaKnown RBP18.47■□□□□ 0.55
CCNDBP1-209ENST00000566833 GGNBP2Q9H3C7 697 aa18.47■□□□□ 0.55
CCNDBP1-209ENST00000566833 USP31Q70CQ4 1352 aa18.46■□□□□ 0.55
CCNDBP1-209ENST00000566833 FYB1O15117 783 aa18.46■□□□□ 0.55
CCNDBP1-209ENST00000566833 ADAMTS2O95450 1211 aa18.46■□□□□ 0.55
CCNDBP1-209ENST00000566833 ZRANB1Q9UGI0 708 aa18.46■□□□□ 0.55
CCNDBP1-209ENST00000566833 ABCA3Q99758 1704 aa18.46■□□□□ 0.55
CCNDBP1-209ENST00000566833 PHRF1Q9P1Y6 1649 aaKnown RBP18.45■□□□□ 0.54
CCNDBP1-209ENST00000566833 SOX12O15370 315 aa18.45■□□□□ 0.54
CCNDBP1-209ENST00000566833 KCNH5Q8NCM2 988 aa18.45■□□□□ 0.54
CCNDBP1-209ENST00000566833 USP19O94966 1318 aa18.45■□□□□ 0.54
CCNDBP1-209ENST00000566833 USP54Q70EL1 1684 aa18.44■□□□□ 0.54
CCNDBP1-209ENST00000566833 NSD2O96028 1365 aa18.43■□□□□ 0.54
CCNDBP1-209ENST00000566833 CRYBG1Q9Y4K1 1723 aa18.43■□□□□ 0.54
CCNDBP1-209ENST00000566833 OVOS2A0A0J9YW53 1432 aa18.43■□□□□ 0.54
CCNDBP1-209ENST00000566833 OVOS2Q6IE36 1432 aa18.43■□□□□ 0.54
CCNDBP1-209ENST00000566833 GCP02774 474 aa18.43■□□□□ 0.54
CCNDBP1-209ENST00000566833 SLIT3O75094 1523 aa18.43■□□□□ 0.54
CCNDBP1-209ENST00000566833 LRP6O75581 1613 aa18.42■□□□□ 0.54
CCNDBP1-209ENST00000566833 ZBTB7CA1YPR0 619 aa18.42■□□□□ 0.54
CCNDBP1-209ENST00000566833 CNGB1Q14028 1251 aaPredicted RBP18.42■□□□□ 0.54
CCNDBP1-209ENST00000566833 MARF1Q9Y4F3 1742 aaKnown RBP18.41■□□□□ 0.54
CCNDBP1-209ENST00000566833 PER1O15534 1290 aaPredicted RBP18.41■□□□□ 0.54
CCNDBP1-209ENST00000566833 ZC3H6P61129 1189 aaKnown RBP18.41■□□□□ 0.54
CCNDBP1-209ENST00000566833 ADRA2BP18089 450 aa18.4■□□□□ 0.54
CCNDBP1-209ENST00000566833 MORC1Q86VD1 984 aa18.4■□□□□ 0.54
CCNDBP1-209ENST00000566833 C8orf37Q96NL8 207 aa18.4■□□□□ 0.54
CCNDBP1-209ENST00000566833 PRDM11Q9NQV5 511 aa18.4■□□□□ 0.54
CCNDBP1-209ENST00000566833 ANKRD26Q9UPS8 1709 aa18.4■□□□□ 0.54
CCNDBP1-209ENST00000566833 AMER1Q5JTC6 1135 aaPredicted RBP18.39■□□□□ 0.53
CCNDBP1-209ENST00000566833 CC2D1BQ5T0F9 858 aaKnown RBP18.39■□□□□ 0.53
CCNDBP1-209ENST00000566833 NGLY1Q96IV0 654 aa18.38■□□□□ 0.53
CCNDBP1-209ENST00000566833 KIAA0232Q92628 1395 aa18.38■□□□□ 0.53
CCNDBP1-209ENST00000566833 TNNT2P45379 298 aaPredicted RBP18.36■□□□□ 0.53
CCNDBP1-209ENST00000566833 PIAS4Q8N2W9 510 aaPredicted RBP18.36■□□□□ 0.53
CCNDBP1-209ENST00000566833 NFAT5O94916 1531 aa18.35■□□□□ 0.53
CCNDBP1-209ENST00000566833 CPDO75976 1380 aa18.35■□□□□ 0.53
CCNDBP1-209ENST00000566833 NPC1L1Q9UHC9 1359 aa18.35■□□□□ 0.53
CCNDBP1-209ENST00000566833 CHRNA2Q15822 529 aa18.35■□□□□ 0.53
CCNDBP1-209ENST00000566833 COL14A1Q05707 1796 aaKnown RBP18.34■□□□□ 0.53
CCNDBP1-209ENST00000566833 FAM83GA6ND36 823 aa18.33■□□□□ 0.52
CCNDBP1-209ENST00000566833 ARHGEF25Q86VW2 580 aa18.33■□□□□ 0.52
CCNDBP1-209ENST00000566833 LTN1O94822 1766 aa18.32■□□□□ 0.52
CCNDBP1-209ENST00000566833 AMPHP49418 695 aa18.32■□□□□ 0.52
CCNDBP1-209ENST00000566833 PLCH1Q4KWH8 1693 aa18.31■□□□□ 0.52
CCNDBP1-209ENST00000566833 AFF2P51816 1311 aa18.31■□□□□ 0.52
CCNDBP1-209ENST00000566833 FBLN1P23142 703 aa18.31■□□□□ 0.52
CCNDBP1-209ENST00000566833 RRS1Q15050 365 aaKnown RBP18.31■□□□□ 0.52
CCNDBP1-209ENST00000566833 MAP3K19Q56UN5 1328 aa18.3■□□□□ 0.52
CCNDBP1-209ENST00000566833 BTG4Q9NY30 223 aa18.3■□□□□ 0.52
CCNDBP1-209ENST00000566833 USP21Q9UK80 565 aa18.3■□□□□ 0.52
CCNDBP1-209ENST00000566833 AATKQ6ZMQ8 1374 aa18.3■□□□□ 0.52
CCNDBP1-209ENST00000566833 PPM1GO15355 546 aaPredicted RBP18.29■□□□□ 0.52
CCNDBP1-209ENST00000566833 EVA1CP58658 441 aa18.29■□□□□ 0.52
CCNDBP1-209ENST00000566833 NWD2Q9ULI1 1742 aa18.29■□□□□ 0.52
CCNDBP1-209ENST00000566833 ZNF772Q68DY9 489 aaPredicted RBP18.28■□□□□ 0.52
CCNDBP1-209ENST00000566833 FNBP4Q8N3X1 1017 aaPredicted RBP18.28■□□□□ 0.52
CCNDBP1-209ENST00000566833 MAP2P11137 1827 aaKnown RBP18.28■□□□□ 0.52
CCNDBP1-209ENST00000566833 MSH5O43196 834 aa18.27■□□□□ 0.52
CCNDBP1-209ENST00000566833 STRN4Q9NRL3 753 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms