RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 TNS3Q68CZ2 1445 aa19.24■□□□□ 0.67
SPG7-215ENST00000566682 ATAD2Q6PL18 1390 aa19.23■□□□□ 0.67
SPG7-215ENST00000566682 U3KPZ7 1027 aaPredicted RBP19.23■□□□□ 0.67
SPG7-215ENST00000566682 LMOD2Q6P5Q4 547 aa19.22■□□□□ 0.67
SPG7-215ENST00000566682 PAK3O75914 559 aaPredicted RBP19.21■□□□□ 0.67
SPG7-215ENST00000566682 PUS7Q96PZ0 661 aaKnown RBP19.21■□□□□ 0.67
SPG7-215ENST00000566682 ALS2Q96Q42 1657 aa19.2■□□□□ 0.66
SPG7-215ENST00000566682 EIF4G2P78344 907 aaKnown RBP eCLIP19.2■□□□□ 0.66
SPG7-215ENST00000566682 TMF1P82094 1093 aa19.2■□□□□ 0.66
SPG7-215ENST00000566682 MEX3CQ5U5Q3 659 aaKnown RBP19.2■□□□□ 0.66
SPG7-215ENST00000566682 ARHGEF10O15013 1369 aa19.19■□□□□ 0.66
SPG7-215ENST00000566682 AKAP12Q02952 1782 aa19.17■□□□□ 0.66
SPG7-215ENST00000566682 ADAMTS2O95450 1211 aa19.17■□□□□ 0.66
SPG7-215ENST00000566682 HSPA5P11021 654 aaKnown RBP19.17■□□□□ 0.66
SPG7-215ENST00000566682 TMC1Q8TDI8 760 aa19.17■□□□□ 0.66
SPG7-215ENST00000566682 PLEKHG5O94827 1062 aa19.16■□□□□ 0.66
SPG7-215ENST00000566682 CABLES1Q8TDN4 633 aa19.16■□□□□ 0.66
SPG7-215ENST00000566682 ZNF692Q9BU19 519 aaPredicted RBP19.16■□□□□ 0.66
SPG7-215ENST00000566682 SLC12A5Q9H2X9 1139 aa19.16■□□□□ 0.66
SPG7-215ENST00000566682 RGS17Q9UGC6 210 aaPredicted RBP19.16■□□□□ 0.66
SPG7-215ENST00000566682 USP6P35125 1406 aa19.16■□□□□ 0.66
SPG7-215ENST00000566682 CPSF1Q10570 1443 aaKnown RBP19.15■□□□□ 0.66
SPG7-215ENST00000566682 MARF1Q9Y4F3 1742 aaKnown RBP19.14■□□□□ 0.66
SPG7-215ENST00000566682 BRD4O60885 1362 aaPredicted RBP19.14■□□□□ 0.65
SPG7-215ENST00000566682 HAP1P54257 671 aaPredicted RBP19.13■□□□□ 0.65
SPG7-215ENST00000566682 CDCA8Q53HL2 280 aa19.13■□□□□ 0.65
SPG7-215ENST00000566682 ABTB2Q8N961 1025 aa19.13■□□□□ 0.65
SPG7-215ENST00000566682 C8orf37Q96NL8 207 aa19.13■□□□□ 0.65
SPG7-215ENST00000566682 ABCA3Q99758 1704 aa19.13■□□□□ 0.65
SPG7-215ENST00000566682 CD163L1Q9NR16 1453 aa19.12■□□□□ 0.65
SPG7-215ENST00000566682 SSH2Q76I76 1423 aa19.12■□□□□ 0.65
SPG7-215ENST00000566682 NUTM2GQ5VZR2 741 aa19.12■□□□□ 0.65
SPG7-215ENST00000566682 MON2Q7Z3U7 1717 aa19.11■□□□□ 0.65
SPG7-215ENST00000566682 CRYBG1Q9Y4K1 1723 aa19.11■□□□□ 0.65
SPG7-215ENST00000566682 KTN1Q86UP2 1357 aaKnown RBP19.11■□□□□ 0.65
SPG7-215ENST00000566682 NGLY1Q96IV0 654 aa19.11■□□□□ 0.65
SPG7-215ENST00000566682 HDGFL2Q7Z4V5 671 aaPredicted RBP19.1■□□□□ 0.65
SPG7-215ENST00000566682 TERF2IPQ9NYB0 399 aa19.1■□□□□ 0.65
SPG7-215ENST00000566682 NINLQ9Y2I6 1382 aa19.09■□□□□ 0.65
SPG7-215ENST00000566682 AFF2P51816 1311 aa19.09■□□□□ 0.65
SPG7-215ENST00000566682 TTC21BQ7Z4L5 1316 aa19.09■□□□□ 0.65
SPG7-215ENST00000566682 NRKQ7Z2Y5 1582 aa19.08■□□□□ 0.65
SPG7-215ENST00000566682 NLRP13Q86W25 1043 aa19.08■□□□□ 0.64
SPG7-215ENST00000566682 A0A1W2PP64 1363 aa19.07■□□□□ 0.64
SPG7-215ENST00000566682 ZNF772Q68DY9 489 aaPredicted RBP19.07■□□□□ 0.64
SPG7-215ENST00000566682 POTEAQ6S8J7 498 aa19.07■□□□□ 0.64
SPG7-215ENST00000566682 PHRF1Q9P1Y6 1649 aaKnown RBP19.07■□□□□ 0.64
SPG7-215ENST00000566682 TTC21AQ8NDW8 1320 aa19.06■□□□□ 0.64
SPG7-215ENST00000566682 PIK3C2AO00443 1686 aa19.06■□□□□ 0.64
SPG7-215ENST00000566682 NLRP6P59044 892 aa19.06■□□□□ 0.64
SPG7-215ENST00000566682 ILDR2Q71H61 639 aa19.06■□□□□ 0.64
SPG7-215ENST00000566682 FNBP4Q8N3X1 1017 aaPredicted RBP19.06■□□□□ 0.64
SPG7-215ENST00000566682 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.05■□□□□ 0.64
SPG7-215ENST00000566682 MYOM1P52179 1685 aa19.05■□□□□ 0.64
SPG7-215ENST00000566682 POLR3GLQ9BT43 218 aa19.04■□□□□ 0.64
SPG7-215ENST00000566682 USP21Q9UK80 565 aa19.04■□□□□ 0.64
SPG7-215ENST00000566682 USP19O94966 1318 aa19.03■□□□□ 0.64
SPG7-215ENST00000566682 EDC4Q6P2E9 1401 aaKnown RBP19.03■□□□□ 0.64
SPG7-215ENST00000566682 C11orf95C9JLR9 678 aaPredicted RBP19.03■□□□□ 0.64
SPG7-215ENST00000566682 ANKRD36BQ8N2N9 1353 aa19.03■□□□□ 0.64
SPG7-215ENST00000566682 FAM83GA6ND36 823 aa19.02■□□□□ 0.64
SPG7-215ENST00000566682 GCP02774 474 aa19.01■□□□□ 0.63
SPG7-215ENST00000566682 QTRT2Q9H974 415 aaKnown RBP19.01■□□□□ 0.63
SPG7-215ENST00000566682 SLIT2O94813 1529 aa19■□□□□ 0.63
SPG7-215ENST00000566682 ZC3H6P61129 1189 aaKnown RBP19■□□□□ 0.63
SPG7-215ENST00000566682 NME9Q86XW9 330 aa19■□□□□ 0.63
SPG7-215ENST00000566682 ZRANB1Q9UGI0 708 aa19■□□□□ 0.63
SPG7-215ENST00000566682 BCL9LQ86UU0 1499 aa19■□□□□ 0.63
SPG7-215ENST00000566682 PLCH1Q4KWH8 1693 aa19■□□□□ 0.63
SPG7-215ENST00000566682 PRDM11Q9NQV5 511 aa18.99■□□□□ 0.63
SPG7-215ENST00000566682 COL14A1Q05707 1796 aaKnown RBP18.98■□□□□ 0.63
SPG7-215ENST00000566682 KIAA0232Q92628 1395 aa18.98■□□□□ 0.63
SPG7-215ENST00000566682 NWD2Q9ULI1 1742 aa18.98■□□□□ 0.63
SPG7-215ENST00000566682 SLIT3O75094 1523 aa18.98■□□□□ 0.63
SPG7-215ENST00000566682 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.97■□□□□ 0.63
SPG7-215ENST00000566682 USP31Q70CQ4 1352 aa18.97■□□□□ 0.63
SPG7-215ENST00000566682 SLC4A2P04920 1241 aa18.97■□□□□ 0.63
SPG7-215ENST00000566682 UNC5CLQ8IV45 518 aa18.97■□□□□ 0.63
SPG7-215ENST00000566682 SPINK5Q9NQ38 1064 aaPredicted RBP18.97■□□□□ 0.63
SPG7-215ENST00000566682 TRPC5Q9UL62 973 aaPredicted RBP18.97■□□□□ 0.63
SPG7-215ENST00000566682 USP54Q70EL1 1684 aa18.96■□□□□ 0.63
SPG7-215ENST00000566682 CHRNA2Q15822 529 aa18.96■□□□□ 0.63
SPG7-215ENST00000566682 BTG4Q9NY30 223 aa18.96■□□□□ 0.63
SPG7-215ENST00000566682 RXRBP28702 533 aa18.95■□□□□ 0.62
SPG7-215ENST00000566682 KCNH5Q8NCM2 988 aa18.95■□□□□ 0.62
SPG7-215ENST00000566682 CARD14Q9BXL6 1004 aa18.95■□□□□ 0.62
SPG7-215ENST00000566682 CPDO75976 1380 aa18.94■□□□□ 0.62
SPG7-215ENST00000566682 ATRNO75882 1429 aa18.94■□□□□ 0.62
SPG7-215ENST00000566682 KIF7Q2M1P5 1343 aa18.94■□□□□ 0.62
SPG7-215ENST00000566682 SOX12O15370 315 aa18.93■□□□□ 0.62
SPG7-215ENST00000566682 CAPN15O75808 1086 aa18.93■□□□□ 0.62
SPG7-215ENST00000566682 RBM6P78332 1123 aaKnown RBP18.93■□□□□ 0.62
SPG7-215ENST00000566682 NRAPQ86VF7 1730 aa18.93■□□□□ 0.62
SPG7-215ENST00000566682 ZBTB7CA1YPR0 619 aa18.92■□□□□ 0.62
SPG7-215ENST00000566682 FYB1O15117 783 aa18.92■□□□□ 0.62
SPG7-215ENST00000566682 OVOS2A0A0J9YW53 1432 aa18.91■□□□□ 0.62
SPG7-215ENST00000566682 OVOS2Q6IE36 1432 aa18.91■□□□□ 0.62
SPG7-215ENST00000566682 NSD3Q9BZ95 1437 aa18.91■□□□□ 0.62
SPG7-215ENST00000566682 KIF20BQ96Q89 1820 aa18.91■□□□□ 0.62
SPG7-215ENST00000566682 LMO7Q8WWI1 1683 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms