RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 ABCA3Q99758 1704 aa21.86■■□□□ 1.09
CMTM3-212ENST00000566121 GLI3P10071 1580 aa21.86■■□□□ 1.09
CMTM3-212ENST00000566121 ACEP12821 1306 aa21.83■■□□□ 1.09
CMTM3-212ENST00000566121 TOPAZ1Q8N9V7 1692 aa21.82■■□□□ 1.08
CMTM3-212ENST00000566121 SIN3AQ96ST3 1273 aa21.81■■□□□ 1.08
CMTM3-212ENST00000566121 COL14A1Q05707 1796 aaKnown RBP21.8■■□□□ 1.08
CMTM3-212ENST00000566121 PAK3O75914 559 aaPredicted RBP21.8■■□□□ 1.08
CMTM3-212ENST00000566121 SEPT12Q8IYM1 358 aa21.8■■□□□ 1.08
CMTM3-212ENST00000566121 PLCH1Q4KWH8 1693 aa21.79■■□□□ 1.08
CMTM3-212ENST00000566121 BTG4Q9NY30 223 aa21.79■■□□□ 1.08
CMTM3-212ENST00000566121 CRYBG1Q9Y4K1 1723 aa21.79■■□□□ 1.08
CMTM3-212ENST00000566121 SRPK2P78362 688 aaKnown RBP21.76■■□□□ 1.07
CMTM3-212ENST00000566121 SRCAPQ6ZRS2 3230 aa21.76■■□□□ 1.07
CMTM3-212ENST00000566121 USP19O94966 1318 aa21.76■■□□□ 1.07
CMTM3-212ENST00000566121 SPATA31A5Q5VU36 1347 aa21.76■■□□□ 1.07
CMTM3-212ENST00000566121 SPATA31A7Q8IWB4 1347 aa21.76■■□□□ 1.07
CMTM3-212ENST00000566121 CPDO75976 1380 aa21.75■■□□□ 1.07
CMTM3-212ENST00000566121 NRAPQ86VF7 1730 aa21.75■■□□□ 1.07
CMTM3-212ENST00000566121 PRDM11Q9NQV5 511 aa21.75■■□□□ 1.07
CMTM3-212ENST00000566121 TRPM1Q7Z4N2 1603 aa21.75■■□□□ 1.07
CMTM3-212ENST00000566121 EVC2Q86UK5 1308 aa21.75■■□□□ 1.07
CMTM3-212ENST00000566121 BLMP54132 1417 aaPredicted RBP21.74■■□□□ 1.07
CMTM3-212ENST00000566121 PPIP5K1Q6PFW1 1433 aa21.74■■□□□ 1.07
CMTM3-212ENST00000566121 SBNO2Q9Y2G9 1366 aa21.74■■□□□ 1.07
CMTM3-212ENST00000566121 KRT27Q7Z3Y8 459 aa21.73■■□□□ 1.07
CMTM3-212ENST00000566121 NLRP13Q86W25 1043 aa21.73■■□□□ 1.07
CMTM3-212ENST00000566121 ZNF692Q9BU19 519 aaPredicted RBP21.73■■□□□ 1.07
CMTM3-212ENST00000566121 CABP2Q9NPB3 220 aa21.73■■□□□ 1.07
CMTM3-212ENST00000566121 ROCK2O75116 1388 aaKnown RBP21.73■■□□□ 1.07
CMTM3-212ENST00000566121 NEUROD1Q13562 356 aa21.72■■□□□ 1.07
CMTM3-212ENST00000566121 ABTB2Q8N961 1025 aa21.72■■□□□ 1.07
CMTM3-212ENST00000566121 KIAA0232Q92628 1395 aa21.72■■□□□ 1.07
CMTM3-212ENST00000566121 SSH2Q76I76 1423 aa21.72■■□□□ 1.07
CMTM3-212ENST00000566121 CABP1Q9NZU7 370 aa21.71■■□□□ 1.07
CMTM3-212ENST00000566121 CCDC9Q9Y3X0 531 aaKnown RBP21.71■■□□□ 1.07
CMTM3-212ENST00000566121 QRICH2Q9H0J4 1663 aa21.69■■□□□ 1.06
CMTM3-212ENST00000566121 USP6P35125 1406 aa21.69■■□□□ 1.06
CMTM3-212ENST00000566121 GCP02774 474 aa21.68■■□□□ 1.06
CMTM3-212ENST00000566121 PUS7Q96PZ0 661 aaKnown RBP21.68■■□□□ 1.06
CMTM3-212ENST00000566121 SPATA31A1Q5TZJ5 1347 aa21.68■■□□□ 1.06
CMTM3-212ENST00000566121 BRWD3Q6RI45 1802 aa21.68■■□□□ 1.06
CMTM3-212ENST00000566121 PHRF1Q9P1Y6 1649 aaKnown RBP21.67■■□□□ 1.06
CMTM3-212ENST00000566121 FAM98CQ17RN3 349 aaKnown RBP21.67■■□□□ 1.06
CMTM3-212ENST00000566121 PLEKHG5O94827 1062 aa21.66■■□□□ 1.06
CMTM3-212ENST00000566121 BARGINQ6ZT62 677 aa21.66■■□□□ 1.06
CMTM3-212ENST00000566121 TRIM26Q12899 539 aaPredicted RBP21.65■■□□□ 1.06
CMTM3-212ENST00000566121 ZRANB1Q9UGI0 708 aa21.65■■□□□ 1.06
CMTM3-212ENST00000566121 SLC24A1O60721 1099 aa21.64■■□□□ 1.05
CMTM3-212ENST00000566121 ZC3H6P61129 1189 aaKnown RBP21.64■■□□□ 1.05
CMTM3-212ENST00000566121 THRAP3Q9Y2W1 955 aaKnown RBP21.64■■□□□ 1.05
CMTM3-212ENST00000566121 CPSF1Q10570 1443 aaKnown RBP21.63■■□□□ 1.05
CMTM3-212ENST00000566121 THSD7AQ9UPZ6 1657 aa21.63■■□□□ 1.05
CMTM3-212ENST00000566121 NRKQ7Z2Y5 1582 aa21.62■■□□□ 1.05
CMTM3-212ENST00000566121 SF3B2Q13435 895 aaKnown RBP21.62■■□□□ 1.05
CMTM3-212ENST00000566121 CHRNA2Q15822 529 aa21.62■■□□□ 1.05
CMTM3-212ENST00000566121 NUTM2GQ5VZR2 741 aa21.62■■□□□ 1.05
CMTM3-212ENST00000566121 AATKQ6ZMQ8 1374 aa21.61■■□□□ 1.05
CMTM3-212ENST00000566121 TTC21AQ8NDW8 1320 aa21.61■■□□□ 1.05
CMTM3-212ENST00000566121 LMO7Q8WWI1 1683 aa21.6■■□□□ 1.05
CMTM3-212ENST00000566121 CAMTA1Q9Y6Y1 1673 aa21.6■■□□□ 1.05
CMTM3-212ENST00000566121 NLRP6P59044 892 aa21.6■■□□□ 1.05
CMTM3-212ENST00000566121 CARD11Q9BXL7 1154 aa21.6■■□□□ 1.05
CMTM3-212ENST00000566121 SLIT3O75094 1523 aa21.6■■□□□ 1.05
CMTM3-212ENST00000566121 TTC21BQ7Z4L5 1316 aa21.59■■□□□ 1.05
CMTM3-212ENST00000566121 EVA1CP58658 441 aa21.59■■□□□ 1.05
CMTM3-212ENST00000566121 TONSLQ96HA7 1378 aa21.59■■□□□ 1.05
CMTM3-212ENST00000566121 C11orf95C9JLR9 678 aaPredicted RBP21.58■■□□□ 1.05
CMTM3-212ENST00000566121 KCNH5Q8NCM2 988 aa21.58■■□□□ 1.05
CMTM3-212ENST00000566121 DISP2A7MBM2 1401 aa21.57■■□□□ 1.04
CMTM3-212ENST00000566121 TCP11L2Q8N4U5 519 aa21.57■■□□□ 1.04
CMTM3-212ENST00000566121 FAM196AQ6ZSG2 479 aa21.56■■□□□ 1.04
CMTM3-212ENST00000566121 BAG6P46379 1132 aa21.55■■□□□ 1.04
CMTM3-212ENST00000566121 STRN4Q9NRL3 753 aa21.55■■□□□ 1.04
CMTM3-212ENST00000566121 USP31Q70CQ4 1352 aa21.54■■□□□ 1.04
CMTM3-212ENST00000566121 A0A0G2JS52 829 aa21.54■■□□□ 1.04
CMTM3-212ENST00000566121 MYT1Q01538 1121 aa21.54■■□□□ 1.04
CMTM3-212ENST00000566121 LARP1Q6PKG0 1096 aaKnown RBP21.54■■□□□ 1.04
CMTM3-212ENST00000566121 ARHGEF25Q86VW2 580 aa21.54■■□□□ 1.04
CMTM3-212ENST00000566121 COL5A2P05997 1499 aaPredicted RBP21.53■■□□□ 1.04
CMTM3-212ENST00000566121 DEFB132Q7Z7B7 95 aa21.53■■□□□ 1.04
CMTM3-212ENST00000566121 AKAP12Q02952 1782 aa21.51■■□□□ 1.03
CMTM3-212ENST00000566121 KTN1Q86UP2 1357 aaKnown RBP21.51■■□□□ 1.03
CMTM3-212ENST00000566121 PIK3C2AO00443 1686 aa21.51■■□□□ 1.03
CMTM3-212ENST00000566121 TIMELESSQ9UNS1 1208 aa21.51■■□□□ 1.03
CMTM3-212ENST00000566121 CRB1P82279 1406 aa21.51■■□□□ 1.03
CMTM3-212ENST00000566121 ABCC6O95255 1503 aa21.5■■□□□ 1.03
CMTM3-212ENST00000566121 NINLQ9Y2I6 1382 aa21.49■■□□□ 1.03
CMTM3-212ENST00000566121 PARD3Q8TEW0 1356 aa21.48■■□□□ 1.03
CMTM3-212ENST00000566121 COL18A1P39060 1754 aa21.48■■□□□ 1.03
CMTM3-212ENST00000566121 CD163L1Q9NR16 1453 aa21.48■■□□□ 1.03
CMTM3-212ENST00000566121 PDE3BQ13370 1112 aa21.48■■□□□ 1.03
CMTM3-212ENST00000566121 TESK2Q96S53 571 aa21.48■■□□□ 1.03
CMTM3-212ENST00000566121 CDCA7Q9BWT1 371 aaPredicted RBP21.48■■□□□ 1.03
CMTM3-212ENST00000566121 RGPD1P0DJD0 1748 aa21.47■■□□□ 1.03
CMTM3-212ENST00000566121 WDR17Q8IZU2 1322 aa21.47■■□□□ 1.03
CMTM3-212ENST00000566121 CLSPNQ9HAW4 1339 aa21.47■■□□□ 1.03
CMTM3-212ENST00000566121 TERF2IPQ9NYB0 399 aa21.46■■□□□ 1.03
CMTM3-212ENST00000566121 AXIN2Q9Y2T1 843 aa21.46■■□□□ 1.03
CMTM3-212ENST00000566121 USP54Q70EL1 1684 aa21.45■■□□□ 1.02
CMTM3-212ENST00000566121 HDGFL2Q7Z4V5 671 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms