RNA–Protein interactions for RNA: ENST00000565582.5

FANCA-218, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-218ENST00000565582 VPS72Q15906 364 aa17.3■□□□□ 0.36
FANCA-218ENST00000565582 COL14A1Q05707 1796 aaKnown RBP17.3■□□□□ 0.36
FANCA-218ENST00000565582 PHRF1Q9P1Y6 1649 aaKnown RBP17.29■□□□□ 0.36
FANCA-218ENST00000565582 QRICH2Q9H0J4 1663 aa17.29■□□□□ 0.36
FANCA-218ENST00000565582 SEPT12Q8IYM1 358 aa17.28■□□□□ 0.36
FANCA-218ENST00000565582 NUTM2GQ5VZR2 741 aa17.27■□□□□ 0.36
FANCA-218ENST00000565582 SIN3AQ96ST3 1273 aa17.27■□□□□ 0.36
FANCA-218ENST00000565582 BTG4Q9NY30 223 aa17.27■□□□□ 0.36
FANCA-218ENST00000565582 L3MBTL2Q969R5 705 aa17.26■□□□□ 0.35
FANCA-218ENST00000565582 ACEP12821 1306 aa17.25■□□□□ 0.35
FANCA-218ENST00000565582 CENPJQ9HC77 1338 aaPredicted RBP17.25■□□□□ 0.35
FANCA-218ENST00000565582 A0A0G2JS52 829 aa17.25■□□□□ 0.35
FANCA-218ENST00000565582 MYT1Q01538 1121 aa17.25■□□□□ 0.35
FANCA-218ENST00000565582 POLR3AO14802 1390 aaPredicted RBP17.25■□□□□ 0.35
FANCA-218ENST00000565582 TRPM1Q7Z4N2 1603 aa17.25■□□□□ 0.35
FANCA-218ENST00000565582 SRCAPQ6ZRS2 3230 aa17.24■□□□□ 0.35
FANCA-218ENST00000565582 PRDM11Q9NQV5 511 aa17.24■□□□□ 0.35
FANCA-218ENST00000565582 KIAA0232Q92628 1395 aa17.24■□□□□ 0.35
FANCA-218ENST00000565582 SRPK2P78362 688 aaKnown RBP17.23■□□□□ 0.35
FANCA-218ENST00000565582 FAM98CQ17RN3 349 aaKnown RBP17.23■□□□□ 0.35
FANCA-218ENST00000565582 NRKQ7Z2Y5 1582 aa17.23■□□□□ 0.35
FANCA-218ENST00000565582 BLMP54132 1417 aaPredicted RBP17.22■□□□□ 0.35
FANCA-218ENST00000565582 PPIP5K1Q6PFW1 1433 aa17.22■□□□□ 0.35
FANCA-218ENST00000565582 NEUROD1Q13562 356 aa17.22■□□□□ 0.35
FANCA-218ENST00000565582 CHRNA2Q15822 529 aa17.22■□□□□ 0.35
FANCA-218ENST00000565582 CABP2Q9NPB3 220 aa17.22■□□□□ 0.35
FANCA-218ENST00000565582 CCDC61Q9Y6R9 512 aa17.22■□□□□ 0.35
FANCA-218ENST00000565582 NBPF8Q3BBV2 869 aa17.21■□□□□ 0.35
FANCA-218ENST00000565582 PLEKHG3A1L390 1219 aa17.2■□□□□ 0.34
FANCA-218ENST00000565582 ONECUT3O60422 494 aaPredicted RBP17.2■□□□□ 0.34
FANCA-218ENST00000565582 ZC3H6P61129 1189 aaKnown RBP17.2■□□□□ 0.34
FANCA-218ENST00000565582 KRT27Q7Z3Y8 459 aa17.2■□□□□ 0.34
FANCA-218ENST00000565582 THSD7AQ9UPZ6 1657 aa17.2■□□□□ 0.34
FANCA-218ENST00000565582 DEFB132Q7Z7B7 95 aa17.19■□□□□ 0.34
FANCA-218ENST00000565582 CCDC125Q86Z20 511 aa17.19■□□□□ 0.34
FANCA-218ENST00000565582 SPATA31A5Q5VU36 1347 aa17.19■□□□□ 0.34
FANCA-218ENST00000565582 SPATA31A7Q8IWB4 1347 aa17.19■□□□□ 0.34
FANCA-218ENST00000565582 FAM182BQ5T319 152 aa17.17■□□□□ 0.34
FANCA-218ENST00000565582 ABTB2Q8N961 1025 aa17.17■□□□□ 0.34
FANCA-218ENST00000565582 STRN4Q9NRL3 753 aa17.17■□□□□ 0.34
FANCA-218ENST00000565582 ROCK2O75116 1388 aaKnown RBP17.16■□□□□ 0.34
FANCA-218ENST00000565582 ZRANB1Q9UGI0 708 aa17.15■□□□□ 0.34
FANCA-218ENST00000565582 USP19O94966 1318 aa17.15■□□□□ 0.34
FANCA-218ENST00000565582 LMO7Q8WWI1 1683 aa17.14■□□□□ 0.33
FANCA-218ENST00000565582 CABP1Q9NZU7 370 aa17.14■□□□□ 0.33
FANCA-218ENST00000565582 CAMTA1Q9Y6Y1 1673 aa17.13■□□□□ 0.33
FANCA-218ENST00000565582 USP6P35125 1406 aa17.13■□□□□ 0.33
FANCA-218ENST00000565582 SF3B2Q13435 895 aaKnown RBP17.13■□□□□ 0.33
FANCA-218ENST00000565582 SPATA31A1Q5TZJ5 1347 aa17.13■□□□□ 0.33
FANCA-218ENST00000565582 PIK3C2AO00443 1686 aa17.13■□□□□ 0.33
FANCA-218ENST00000565582 SSH2Q76I76 1423 aa17.13■□□□□ 0.33
FANCA-218ENST00000565582 USP35Q9P2H5 1018 aa17.12■□□□□ 0.33
FANCA-218ENST00000565582 EVC2Q86UK5 1308 aa17.11■□□□□ 0.33
FANCA-218ENST00000565582 CPDO75976 1380 aa17.11■□□□□ 0.33
FANCA-218ENST00000565582 RGPD1P0DJD0 1748 aa17.1■□□□□ 0.33
FANCA-218ENST00000565582 ZBTB7CA1YPR0 619 aa17.1■□□□□ 0.33
FANCA-218ENST00000565582 TNS1Q9HBL0 1735 aaKnown RBP17.1■□□□□ 0.33
FANCA-218ENST00000565582 GCP02774 474 aa17.09■□□□□ 0.33
FANCA-218ENST00000565582 LARP1Q6PKG0 1096 aaKnown RBP17.09■□□□□ 0.33
FANCA-218ENST00000565582 NLRP13Q86W25 1043 aa17.09■□□□□ 0.33
FANCA-218ENST00000565582 SLIT3O75094 1523 aa17.09■□□□□ 0.33
FANCA-218ENST00000565582 AKAP12Q02952 1782 aa17.08■□□□□ 0.33
FANCA-218ENST00000565582 COL5A2P05997 1499 aaPredicted RBP17.08■□□□□ 0.32
FANCA-218ENST00000565582 EVA1CP58658 441 aa17.08■□□□□ 0.32
FANCA-218ENST00000565582 NLRP6P59044 892 aa17.07■□□□□ 0.32
FANCA-218ENST00000565582 BAG6P46379 1132 aa17.06■□□□□ 0.32
FANCA-218ENST00000565582 BRD4O60885 1362 aaPredicted RBP17.05■□□□□ 0.32
FANCA-218ENST00000565582 TONSLQ96HA7 1378 aa17.04■□□□□ 0.32
FANCA-218ENST00000565582 EN1Q05925 392 aaPredicted RBP17.04■□□□□ 0.32
FANCA-218ENST00000565582 PSDA5PKW4 1024 aaPredicted RBP17.03■□□□□ 0.32
FANCA-218ENST00000565582 SOX12O15370 315 aa17.03■□□□□ 0.32
FANCA-218ENST00000565582 TTC21BQ7Z4L5 1316 aa17.02■□□□□ 0.32
FANCA-218ENST00000565582 MON2Q7Z3U7 1717 aa17.02■□□□□ 0.32
FANCA-218ENST00000565582 TRIM37O94972 964 aa17.02■□□□□ 0.32
FANCA-218ENST00000565582 BARGINQ6ZT62 677 aa17.02■□□□□ 0.32
FANCA-218ENST00000565582 TCP11L2Q8N4U5 519 aa17.02■□□□□ 0.32
FANCA-218ENST00000565582 CARD11Q9BXL7 1154 aa17.02■□□□□ 0.32
FANCA-218ENST00000565582 COL18A1P39060 1754 aa17.02■□□□□ 0.31
FANCA-218ENST00000565582 CRB1P82279 1406 aa17.01■□□□□ 0.31
FANCA-218ENST00000565582 CPSF1Q10570 1443 aaKnown RBP17.01■□□□□ 0.31
FANCA-218ENST00000565582 PARP4Q9UKK3 1724 aaKnown RBP17.01■□□□□ 0.31
FANCA-218ENST00000565582 AATKQ6ZMQ8 1374 aa17.01■□□□□ 0.31
FANCA-218ENST00000565582 KTN1Q86UP2 1357 aaKnown RBP17.01■□□□□ 0.31
FANCA-218ENST00000565582 LRRC37A3O60309 1634 aa17■□□□□ 0.31
FANCA-218ENST00000565582 DISP2A7MBM2 1401 aa17■□□□□ 0.31
FANCA-218ENST00000565582 NFAT5O94916 1531 aa17■□□□□ 0.31
FANCA-218ENST00000565582 SBNO2Q9Y2G9 1366 aa17■□□□□ 0.31
FANCA-218ENST00000565582 PDE3BQ13370 1112 aa16.99■□□□□ 0.31
FANCA-218ENST00000565582 FAM196AQ6ZSG2 479 aa16.99■□□□□ 0.31
FANCA-218ENST00000565582 CD163L1Q9NR16 1453 aa16.99■□□□□ 0.31
FANCA-218ENST00000565582 WNK3Q9BYP7 1800 aa16.98■□□□□ 0.31
FANCA-218ENST00000565582 EZH2Q15910 746 aaKnown RBP16.98■□□□□ 0.31
FANCA-218ENST00000565582 AXIN2Q9Y2T1 843 aa16.98■□□□□ 0.31
FANCA-218ENST00000565582 RGPD5Q99666 1765 aa16.97■□□□□ 0.31
FANCA-218ENST00000565582 TTC21AQ8NDW8 1320 aa16.96■□□□□ 0.31
FANCA-218ENST00000565582 LRP5O75197 1615 aa16.96■□□□□ 0.31
FANCA-218ENST00000565582 TOM1L2Q6ZVM7 507 aa16.96■□□□□ 0.31
FANCA-218ENST00000565582 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.96■□□□□ 0.31
FANCA-218ENST00000565582 ZNF692Q9BU19 519 aaPredicted RBP16.96■□□□□ 0.31
FANCA-218ENST00000565582 THRAP3Q9Y2W1 955 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms