RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 SLC24A1O60721 1099 aa26.15■■□□□ 1.78
PKD1-229ENST00000564890 ZNF772Q68DY9 489 aaPredicted RBP26.15■■□□□ 1.78
PKD1-229ENST00000564890 USP6P35125 1406 aa26.13■■□□□ 1.77
PKD1-229ENST00000564890 ABCA3Q99758 1704 aa26.12■■□□□ 1.77
PKD1-229ENST00000564890 PUS7Q96PZ0 661 aaKnown RBP26.12■■□□□ 1.77
PKD1-229ENST00000564890 MARF1Q9Y4F3 1742 aaKnown RBP26.11■■□□□ 1.77
PKD1-229ENST00000564890 BRD4O60885 1362 aaPredicted RBP26.1■■□□□ 1.77
PKD1-229ENST00000564890 TMF1P82094 1093 aa26.1■■□□□ 1.77
PKD1-229ENST00000564890 TMC1Q8TDI8 760 aa26.1■■□□□ 1.77
PKD1-229ENST00000564890 NUTM2GQ5VZR2 741 aa26.09■■□□□ 1.77
PKD1-229ENST00000564890 ZNF692Q9BU19 519 aaPredicted RBP26.09■■□□□ 1.77
PKD1-229ENST00000564890 ABTB2Q8N961 1025 aa26.08■■□□□ 1.77
PKD1-229ENST00000564890 CPSF1Q10570 1443 aaKnown RBP26.07■■□□□ 1.76
PKD1-229ENST00000564890 AKAP12Q02952 1782 aa26.07■■□□□ 1.76
PKD1-229ENST00000564890 FNBP4Q8N3X1 1017 aaPredicted RBP26.06■■□□□ 1.76
PKD1-229ENST00000564890 SLC12A5Q9H2X9 1139 aa26.06■■□□□ 1.76
PKD1-229ENST00000564890 SSH2Q76I76 1423 aa26.05■■□□□ 1.76
PKD1-229ENST00000564890 USP21Q9UK80 565 aa26.05■■□□□ 1.76
PKD1-229ENST00000564890 KTN1Q86UP2 1357 aaKnown RBP26.05■■□□□ 1.76
PKD1-229ENST00000564890 CRYBG1Q9Y4K1 1723 aa26.05■■□□□ 1.76
PKD1-229ENST00000564890 EIF4G2P78344 907 aaKnown RBP eCLIP26.04■■□□□ 1.76
PKD1-229ENST00000564890 CD163L1Q9NR16 1453 aa26.03■■□□□ 1.76
PKD1-229ENST00000564890 HDGFL2Q7Z4V5 671 aaPredicted RBP26.02■■□□□ 1.76
PKD1-229ENST00000564890 QTRT2Q9H974 415 aaKnown RBP26.02■■□□□ 1.76
PKD1-229ENST00000564890 TTC21BQ7Z4L5 1316 aa26.02■■□□□ 1.76
PKD1-229ENST00000564890 NINLQ9Y2I6 1382 aa26.02■■□□□ 1.76
PKD1-229ENST00000564890 HSPA5P11021 654 aaKnown RBP26.01■■□□□ 1.75
PKD1-229ENST00000564890 CDCA8Q53HL2 280 aa26.01■■□□□ 1.75
PKD1-229ENST00000564890 NLRP13Q86W25 1043 aa26.01■■□□□ 1.75
PKD1-229ENST00000564890 MON2Q7Z3U7 1717 aa26■■□□□ 1.75
PKD1-229ENST00000564890 PHRF1Q9P1Y6 1649 aaKnown RBP26■■□□□ 1.75
PKD1-229ENST00000564890 TERF2IPQ9NYB0 399 aa26■■□□□ 1.75
PKD1-229ENST00000564890 NRKQ7Z2Y5 1582 aa25.99■■□□□ 1.75
PKD1-229ENST00000564890 SLIT2O94813 1529 aa25.99■■□□□ 1.75
PKD1-229ENST00000564890 BCL9LQ86UU0 1499 aa25.99■■□□□ 1.75
PKD1-229ENST00000564890 USP19O94966 1318 aa25.99■■□□□ 1.75
PKD1-229ENST00000564890 FAM83GA6ND36 823 aa25.99■■□□□ 1.75
PKD1-229ENST00000564890 NLRP6P59044 892 aa25.99■■□□□ 1.75
PKD1-229ENST00000564890 TTC21AQ8NDW8 1320 aa25.98■■□□□ 1.75
PKD1-229ENST00000564890 RXRBP28702 533 aa25.98■■□□□ 1.75
PKD1-229ENST00000564890 A0A1W2PP64 1363 aa25.97■■□□□ 1.75
PKD1-229ENST00000564890 PIK3C2AO00443 1686 aa25.97■■□□□ 1.75
PKD1-229ENST00000564890 TRPC5Q9UL62 973 aaPredicted RBP25.97■■□□□ 1.75
PKD1-229ENST00000564890 PLCH1Q4KWH8 1693 aa25.96■■□□□ 1.75
PKD1-229ENST00000564890 ATRNO75882 1429 aa25.96■■□□□ 1.75
PKD1-229ENST00000564890 UNC5CLQ8IV45 518 aa25.95■■□□□ 1.74
PKD1-229ENST00000564890 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.95■■□□□ 1.74
PKD1-229ENST00000564890 PRDM11Q9NQV5 511 aa25.95■■□□□ 1.74
PKD1-229ENST00000564890 KIAA0232Q92628 1395 aa25.95■■□□□ 1.74
PKD1-229ENST00000564890 ZC3H6P61129 1189 aaKnown RBP25.94■■□□□ 1.74
PKD1-229ENST00000564890 RBM6P78332 1123 aaKnown RBP25.94■■□□□ 1.74
PKD1-229ENST00000564890 EDC4Q6P2E9 1401 aaKnown RBP25.94■■□□□ 1.74
PKD1-229ENST00000564890 COL14A1Q05707 1796 aaKnown RBP25.93■■□□□ 1.74
PKD1-229ENST00000564890 GCP02774 474 aa25.93■■□□□ 1.74
PKD1-229ENST00000564890 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.93■■□□□ 1.74
PKD1-229ENST00000564890 NWD2Q9ULI1 1742 aa25.92■■□□□ 1.74
PKD1-229ENST00000564890 SOCS7O14512 581 aa25.91■■□□□ 1.74
PKD1-229ENST00000564890 SLIT3O75094 1523 aa25.91■■□□□ 1.74
PKD1-229ENST00000564890 ANKRD36BQ8N2N9 1353 aa25.91■■□□□ 1.74
PKD1-229ENST00000564890 CHRNA2Q15822 529 aa25.9■■□□□ 1.74
PKD1-229ENST00000564890 BTG4Q9NY30 223 aa25.9■■□□□ 1.74
PKD1-229ENST00000564890 NME9Q86XW9 330 aa25.89■■□□□ 1.74
PKD1-229ENST00000564890 CDK12Q9NYV4 1490 aaPredicted RBP25.88■■□□□ 1.73
PKD1-229ENST00000564890 CPDO75976 1380 aa25.88■■□□□ 1.73
PKD1-229ENST00000564890 POLR3GLQ9BT43 218 aa25.88■■□□□ 1.73
PKD1-229ENST00000564890 ZRANB1Q9UGI0 708 aa25.88■■□□□ 1.73
PKD1-229ENST00000564890 GJD4Q96KN9 370 aaPredicted RBP25.87■■□□□ 1.73
PKD1-229ENST00000564890 USP31Q70CQ4 1352 aa25.86■■□□□ 1.73
PKD1-229ENST00000564890 VPS72Q15906 364 aa25.86■■□□□ 1.73
PKD1-229ENST00000564890 MYOM1P52179 1685 aa25.86■■□□□ 1.73
PKD1-229ENST00000564890 NRAPQ86VF7 1730 aa25.85■■□□□ 1.73
PKD1-229ENST00000564890 RGS12O14924 1447 aa25.84■■□□□ 1.73
PKD1-229ENST00000564890 SOX12O15370 315 aa25.84■■□□□ 1.73
PKD1-229ENST00000564890 KCNH5Q8NCM2 988 aa25.84■■□□□ 1.73
PKD1-229ENST00000564890 CCDC9Q9Y3X0 531 aaKnown RBP25.84■■□□□ 1.73
PKD1-229ENST00000564890 ZBTB7CA1YPR0 619 aa25.83■■□□□ 1.73
PKD1-229ENST00000564890 USP54Q70EL1 1684 aa25.82■■□□□ 1.72
PKD1-229ENST00000564890 GLI3P10071 1580 aa25.81■■□□□ 1.72
PKD1-229ENST00000564890 C11orf95C9JLR9 678 aaPredicted RBP25.79■■□□□ 1.72
PKD1-229ENST00000564890 STRN4Q9NRL3 753 aa25.79■■□□□ 1.72
PKD1-229ENST00000564890 LMO7Q8WWI1 1683 aa25.79■■□□□ 1.72
PKD1-229ENST00000564890 OVOS2A0A0J9YW53 1432 aa25.79■■□□□ 1.72
PKD1-229ENST00000564890 OVOS2Q6IE36 1432 aa25.79■■□□□ 1.72
PKD1-229ENST00000564890 NFAT5O94916 1531 aa25.78■■□□□ 1.72
PKD1-229ENST00000564890 CAMTA1Q9Y6Y1 1673 aa25.78■■□□□ 1.72
PKD1-229ENST00000564890 ARHGEF25Q86VW2 580 aa25.77■■□□□ 1.72
PKD1-229ENST00000564890 CARD14Q9BXL6 1004 aa25.77■■□□□ 1.72
PKD1-229ENST00000564890 AATKQ6ZMQ8 1374 aa25.77■■□□□ 1.72
PKD1-229ENST00000564890 EVA1CP58658 441 aa25.76■■□□□ 1.71
PKD1-229ENST00000564890 NSD3Q9BZ95 1437 aa25.75■■□□□ 1.71
PKD1-229ENST00000564890 SPATA31A5Q5VU36 1347 aa25.75■■□□□ 1.71
PKD1-229ENST00000564890 SPATA31A7Q8IWB4 1347 aa25.75■■□□□ 1.71
PKD1-229ENST00000564890 COG3Q96JB2 828 aa25.75■■□□□ 1.71
PKD1-229ENST00000564890 FYB1O15117 783 aa25.73■■□□□ 1.71
PKD1-229ENST00000564890 COL18A1P39060 1754 aa25.72■■□□□ 1.71
PKD1-229ENST00000564890 GGNBP2Q9H3C7 697 aa25.72■■□□□ 1.71
PKD1-229ENST00000564890 COL5A2P05997 1499 aaPredicted RBP25.72■■□□□ 1.71
PKD1-229ENST00000564890 KIF7Q2M1P5 1343 aa25.71■■□□□ 1.71
PKD1-229ENST00000564890 LARP1Q6PKG0 1096 aaKnown RBP25.7■■□□□ 1.7
PKD1-229ENST00000564890 AXIN2Q9Y2T1 843 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms