RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 COL22A1Q8NFW1 1626 aaPredicted RBP19.32■□□□□ 0.68
CNOT1-206ENST00000564557 ACEP12821 1306 aa19.31■□□□□ 0.68
CNOT1-206ENST00000564557 PLEKHG3A1L390 1219 aa19.3■□□□□ 0.68
CNOT1-206ENST00000564557 RXRBP28702 533 aa19.29■□□□□ 0.68
CNOT1-206ENST00000564557 QTRT2Q9H974 415 aaKnown RBP19.29■□□□□ 0.68
CNOT1-206ENST00000564557 USP21Q9UK80 565 aa19.29■□□□□ 0.68
CNOT1-206ENST00000564557 PPIP5K1Q6PFW1 1433 aa19.28■□□□□ 0.68
CNOT1-206ENST00000564557 CABLES1Q8TDN4 633 aa19.28■□□□□ 0.68
CNOT1-206ENST00000564557 CABP1Q9NZU7 370 aa19.27■□□□□ 0.68
CNOT1-206ENST00000564557 SLC24A1O60721 1099 aa19.26■□□□□ 0.67
CNOT1-206ENST00000564557 POLR3AO14802 1390 aaPredicted RBP19.26■□□□□ 0.67
CNOT1-206ENST00000564557 FNBP4Q8N3X1 1017 aaPredicted RBP19.25■□□□□ 0.67
CNOT1-206ENST00000564557 TRPC5Q9UL62 973 aaPredicted RBP19.25■□□□□ 0.67
CNOT1-206ENST00000564557 TOPAZ1Q8N9V7 1692 aa19.24■□□□□ 0.67
CNOT1-206ENST00000564557 ATAD2Q6PL18 1390 aa19.23■□□□□ 0.67
CNOT1-206ENST00000564557 RBM6P78332 1123 aaKnown RBP19.23■□□□□ 0.67
CNOT1-206ENST00000564557 ABTB2Q8N961 1025 aa19.23■□□□□ 0.67
CNOT1-206ENST00000564557 TRPM3Q9HCF6 1732 aaPredicted RBP19.22■□□□□ 0.67
CNOT1-206ENST00000564557 SBNO2Q9Y2G9 1366 aa19.22■□□□□ 0.67
CNOT1-206ENST00000564557 RNF39Q9H2S5 420 aa19.22■□□□□ 0.67
CNOT1-206ENST00000564557 ST20-MTHFSA0A0A6YYL1 179 aa19.21■□□□□ 0.67
CNOT1-206ENST00000564557 NUTM2GQ5VZR2 741 aa19.21■□□□□ 0.67
CNOT1-206ENST00000564557 ZNF692Q9BU19 519 aaPredicted RBP19.21■□□□□ 0.67
CNOT1-206ENST00000564557 MARF1Q9Y4F3 1742 aaKnown RBP19.2■□□□□ 0.66
CNOT1-206ENST00000564557 TMC1Q8TDI8 760 aa19.2■□□□□ 0.66
CNOT1-206ENST00000564557 BRD4O60885 1362 aaPredicted RBP19.19■□□□□ 0.66
CNOT1-206ENST00000564557 ALS2Q96Q42 1657 aa19.19■□□□□ 0.66
CNOT1-206ENST00000564557 NLRP13Q86W25 1043 aa19.18■□□□□ 0.66
CNOT1-206ENST00000564557 UNC5CLQ8IV45 518 aa19.18■□□□□ 0.66
CNOT1-206ENST00000564557 SLC4A2P04920 1241 aa19.17■□□□□ 0.66
CNOT1-206ENST00000564557 CCDC9Q9Y3X0 531 aaKnown RBP19.17■□□□□ 0.66
CNOT1-206ENST00000564557 USP47Q96K76 1375 aa19.17■□□□□ 0.66
CNOT1-206ENST00000564557 PRDM11Q9NQV5 511 aa19.16■□□□□ 0.66
CNOT1-206ENST00000564557 FAM83GA6ND36 823 aa19.15■□□□□ 0.66
CNOT1-206ENST00000564557 TMF1P82094 1093 aa19.15■□□□□ 0.66
CNOT1-206ENST00000564557 HDGFL2Q7Z4V5 671 aaPredicted RBP19.15■□□□□ 0.66
CNOT1-206ENST00000564557 PUS7Q96PZ0 661 aaKnown RBP19.15■□□□□ 0.66
CNOT1-206ENST00000564557 USP6P35125 1406 aa19.15■□□□□ 0.66
CNOT1-206ENST00000564557 NLRP6P59044 892 aa19.14■□□□□ 0.65
CNOT1-206ENST00000564557 BCL9LQ86UU0 1499 aa19.14■□□□□ 0.65
CNOT1-206ENST00000564557 ZC3H6P61129 1189 aaKnown RBP19.13■□□□□ 0.65
CNOT1-206ENST00000564557 GJD4Q96KN9 370 aaPredicted RBP19.13■□□□□ 0.65
CNOT1-206ENST00000564557 BTG4Q9NY30 223 aa19.13■□□□□ 0.65
CNOT1-206ENST00000564557 TERF2IPQ9NYB0 399 aa19.13■□□□□ 0.65
CNOT1-206ENST00000564557 KTN1Q86UP2 1357 aaKnown RBP19.13■□□□□ 0.65
CNOT1-206ENST00000564557 ATRNO75882 1429 aa19.13■□□□□ 0.65
CNOT1-206ENST00000564557 CDK12Q9NYV4 1490 aaPredicted RBP19.13■□□□□ 0.65
CNOT1-206ENST00000564557 SLIT2O94813 1529 aa19.13■□□□□ 0.65
CNOT1-206ENST00000564557 ABCA3Q99758 1704 aa19.13■□□□□ 0.65
CNOT1-206ENST00000564557 CDCA8Q53HL2 280 aa19.12■□□□□ 0.65
CNOT1-206ENST00000564557 TESK2Q96S53 571 aa19.12■□□□□ 0.65
CNOT1-206ENST00000564557 SLC12A5Q9H2X9 1139 aa19.11■□□□□ 0.65
CNOT1-206ENST00000564557 TTC21BQ7Z4L5 1316 aa19.1■□□□□ 0.65
CNOT1-206ENST00000564557 TTC21AQ8NDW8 1320 aa19.1■□□□□ 0.65
CNOT1-206ENST00000564557 KIAA0232Q92628 1395 aa19.09■□□□□ 0.65
CNOT1-206ENST00000564557 ZBTB7CA1YPR0 619 aa19.09■□□□□ 0.65
CNOT1-206ENST00000564557 GCP02774 474 aa19.09■□□□□ 0.65
CNOT1-206ENST00000564557 VPS72Q15906 364 aa19.09■□□□□ 0.65
CNOT1-206ENST00000564557 EVA1CP58658 441 aa19.08■□□□□ 0.64
CNOT1-206ENST00000564557 CHRNA2Q15822 529 aa19.08■□□□□ 0.64
CNOT1-206ENST00000564557 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.08■□□□□ 0.64
CNOT1-206ENST00000564557 COL14A1Q05707 1796 aaKnown RBP19.08■□□□□ 0.64
CNOT1-206ENST00000564557 NWD2Q9ULI1 1742 aa19.08■□□□□ 0.64
CNOT1-206ENST00000564557 CPSF1Q10570 1443 aaKnown RBP19.08■□□□□ 0.64
CNOT1-206ENST00000564557 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.07■□□□□ 0.64
CNOT1-206ENST00000564557 PLCH1Q4KWH8 1693 aa19.07■□□□□ 0.64
CNOT1-206ENST00000564557 RGS12O14924 1447 aa19.07■□□□□ 0.64
CNOT1-206ENST00000564557 NINLQ9Y2I6 1382 aa19.06■□□□□ 0.64
CNOT1-206ENST00000564557 USP19O94966 1318 aa19.06■□□□□ 0.64
CNOT1-206ENST00000564557 A0A0G2JS52 829 aa19.06■□□□□ 0.64
CNOT1-206ENST00000564557 MYT1Q01538 1121 aa19.06■□□□□ 0.64
CNOT1-206ENST00000564557 PHRF1Q9P1Y6 1649 aaKnown RBP19.06■□□□□ 0.64
CNOT1-206ENST00000564557 AKAP12Q02952 1782 aa19.06■□□□□ 0.64
CNOT1-206ENST00000564557 EIF4G2P78344 907 aaKnown RBP eCLIP19.05■□□□□ 0.64
CNOT1-206ENST00000564557 KCNH5Q8NCM2 988 aa19.05■□□□□ 0.64
CNOT1-206ENST00000564557 STRN4Q9NRL3 753 aa19.05■□□□□ 0.64
CNOT1-206ENST00000564557 SSH2Q76I76 1423 aa19.05■□□□□ 0.64
CNOT1-206ENST00000564557 CRYBG1Q9Y4K1 1723 aa19.05■□□□□ 0.64
CNOT1-206ENST00000564557 SOX12O15370 315 aa19.04■□□□□ 0.64
CNOT1-206ENST00000564557 CPDO75976 1380 aa19.02■□□□□ 0.64
CNOT1-206ENST00000564557 POLR3GLQ9BT43 218 aa19.01■□□□□ 0.63
CNOT1-206ENST00000564557 A0A1W2PP64 1363 aa19.01■□□□□ 0.63
CNOT1-206ENST00000564557 EDC4Q6P2E9 1401 aaKnown RBP19■□□□□ 0.63
CNOT1-206ENST00000564557 SEPT12Q8IYM1 358 aa19■□□□□ 0.63
CNOT1-206ENST00000564557 NRKQ7Z2Y5 1582 aa19■□□□□ 0.63
CNOT1-206ENST00000564557 MON2Q7Z3U7 1717 aa19■□□□□ 0.63
CNOT1-206ENST00000564557 PIK3C2AO00443 1686 aa18.99■□□□□ 0.63
CNOT1-206ENST00000564557 FAM98CQ17RN3 349 aaKnown RBP18.99■□□□□ 0.63
CNOT1-206ENST00000564557 NME9Q86XW9 330 aa18.99■□□□□ 0.63
CNOT1-206ENST00000564557 CD163L1Q9NR16 1453 aa18.98■□□□□ 0.63
CNOT1-206ENST00000564557 UPF1Q92900 1129 aaKnown RBP eCLIP18.98■□□□□ 0.63
CNOT1-206ENST00000564557 U3KPZ7 1027 aaPredicted RBP18.98■□□□□ 0.63
CNOT1-206ENST00000564557 SPATA31A5Q5VU36 1347 aa18.98■□□□□ 0.63
CNOT1-206ENST00000564557 SPATA31A7Q8IWB4 1347 aa18.98■□□□□ 0.63
CNOT1-206ENST00000564557 GLI3P10071 1580 aa18.98■□□□□ 0.63
CNOT1-206ENST00000564557 SLIT3O75094 1523 aa18.97■□□□□ 0.63
CNOT1-206ENST00000564557 HSPA5P11021 654 aaKnown RBP18.97■□□□□ 0.63
CNOT1-206ENST00000564557 USP35Q9P2H5 1018 aa18.97■□□□□ 0.63
CNOT1-206ENST00000564557 NRAPQ86VF7 1730 aa18.97■□□□□ 0.63
CNOT1-206ENST00000564557 ANKRD36BQ8N2N9 1353 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms