RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 CCDC61Q9Y6R9 512 aa24.23■■□□□ 1.47
CCNF-203ENST00000564236 NRAPQ86VF7 1730 aa24.22■■□□□ 1.47
CCNF-203ENST00000564236 COL14A1Q05707 1796 aaKnown RBP24.21■■□□□ 1.47
CCNF-203ENST00000564236 SEPT12Q8IYM1 358 aa24.19■■□□□ 1.46
CCNF-203ENST00000564236 L3MBTL2Q969R5 705 aa24.19■■□□□ 1.46
CCNF-203ENST00000564236 CENPJQ9HC77 1338 aaPredicted RBP24.18■■□□□ 1.46
CCNF-203ENST00000564236 BLMP54132 1417 aaPredicted RBP24.18■■□□□ 1.46
CCNF-203ENST00000564236 ACEP12821 1306 aa24.17■■□□□ 1.46
CCNF-203ENST00000564236 NBPF8Q3BBV2 869 aa24.17■■□□□ 1.46
CCNF-203ENST00000564236 BTG4Q9NY30 223 aa24.17■■□□□ 1.46
CCNF-203ENST00000564236 PAK3O75914 559 aaPredicted RBP24.16■■□□□ 1.46
CCNF-203ENST00000564236 PLEKHG5O94827 1062 aa24.15■■□□□ 1.46
CCNF-203ENST00000564236 BRD4O60885 1362 aaPredicted RBP24.14■■□□□ 1.45
CCNF-203ENST00000564236 SPATA31A5Q5VU36 1347 aa24.12■■□□□ 1.45
CCNF-203ENST00000564236 SPATA31A7Q8IWB4 1347 aa24.12■■□□□ 1.45
CCNF-203ENST00000564236 BRWD3Q6RI45 1802 aa24.12■■□□□ 1.45
CCNF-203ENST00000564236 CCDC9Q9Y3X0 531 aaKnown RBP24.12■■□□□ 1.45
CCNF-203ENST00000564236 PHRF1Q9P1Y6 1649 aaKnown RBP24.12■■□□□ 1.45
CCNF-203ENST00000564236 KRT27Q7Z3Y8 459 aa24.11■■□□□ 1.45
CCNF-203ENST00000564236 PRDM11Q9NQV5 511 aa24.11■■□□□ 1.45
CCNF-203ENST00000564236 KIAA0232Q92628 1395 aa24.11■■□□□ 1.45
CCNF-203ENST00000564236 USP19O94966 1318 aa24.1■■□□□ 1.45
CCNF-203ENST00000564236 PPIP5K1Q6PFW1 1433 aa24.1■■□□□ 1.45
CCNF-203ENST00000564236 TRPM1Q7Z4N2 1603 aa24.1■■□□□ 1.45
CCNF-203ENST00000564236 SIN3AQ96ST3 1273 aa24.1■■□□□ 1.45
CCNF-203ENST00000564236 QRICH2Q9H0J4 1663 aa24.08■■□□□ 1.45
CCNF-203ENST00000564236 CPDO75976 1380 aa24.08■■□□□ 1.45
CCNF-203ENST00000564236 SRPK2P78362 688 aaKnown RBP24.08■■□□□ 1.45
CCNF-203ENST00000564236 FAM98CQ17RN3 349 aaKnown RBP24.07■■□□□ 1.44
CCNF-203ENST00000564236 THSD7AQ9UPZ6 1657 aa24.07■■□□□ 1.44
CCNF-203ENST00000564236 NRKQ7Z2Y5 1582 aa24.07■■□□□ 1.44
CCNF-203ENST00000564236 CABP2Q9NPB3 220 aa24.06■■□□□ 1.44
CCNF-203ENST00000564236 SRCAPQ6ZRS2 3230 aa24.06■■□□□ 1.44
CCNF-203ENST00000564236 ZRANB1Q9UGI0 708 aa24.05■■□□□ 1.44
CCNF-203ENST00000564236 SSH2Q76I76 1423 aa24.04■■□□□ 1.44
CCNF-203ENST00000564236 ABTB2Q8N961 1025 aa24.04■■□□□ 1.44
CCNF-203ENST00000564236 SPATA31A1Q5TZJ5 1347 aa24.04■■□□□ 1.44
CCNF-203ENST00000564236 USP6P35125 1406 aa24.03■■□□□ 1.44
CCNF-203ENST00000564236 ROCK2O75116 1388 aaKnown RBP24.03■■□□□ 1.44
CCNF-203ENST00000564236 EVC2Q86UK5 1308 aa24.02■■□□□ 1.44
CCNF-203ENST00000564236 LMO7Q8WWI1 1683 aa24.02■■□□□ 1.44
CCNF-203ENST00000564236 ZC3H6P61129 1189 aaKnown RBP24.01■■□□□ 1.43
CCNF-203ENST00000564236 CHRNA2Q15822 529 aa24.01■■□□□ 1.43
CCNF-203ENST00000564236 NUTM2GQ5VZR2 741 aa24.01■■□□□ 1.43
CCNF-203ENST00000564236 NLRP13Q86W25 1043 aa24.01■■□□□ 1.43
CCNF-203ENST00000564236 CABP1Q9NZU7 370 aa24■■□□□ 1.43
CCNF-203ENST00000564236 GCP02774 474 aa23.99■■□□□ 1.43
CCNF-203ENST00000564236 SF3B2Q13435 895 aaKnown RBP23.99■■□□□ 1.43
CCNF-203ENST00000564236 NEUROD1Q13562 356 aa23.99■■□□□ 1.43
CCNF-203ENST00000564236 SBNO2Q9Y2G9 1366 aa23.99■■□□□ 1.43
CCNF-203ENST00000564236 CAMTA1Q9Y6Y1 1673 aa23.99■■□□□ 1.43
CCNF-203ENST00000564236 DEFB132Q7Z7B7 95 aa23.98■■□□□ 1.43
CCNF-203ENST00000564236 SLIT3O75094 1523 aa23.97■■□□□ 1.43
CCNF-203ENST00000564236 BARGINQ6ZT62 677 aa23.97■■□□□ 1.43
CCNF-203ENST00000564236 DISP2A7MBM2 1401 aa23.96■■□□□ 1.43
CCNF-203ENST00000564236 A0A0G2JS52 829 aa23.96■■□□□ 1.43
CCNF-203ENST00000564236 MYT1Q01538 1121 aa23.96■■□□□ 1.43
CCNF-203ENST00000564236 ZNF692Q9BU19 519 aaPredicted RBP23.94■■□□□ 1.42
CCNF-203ENST00000564236 STRN4Q9NRL3 753 aa23.93■■□□□ 1.42
CCNF-203ENST00000564236 CPSF1Q10570 1443 aaKnown RBP23.93■■□□□ 1.42
CCNF-203ENST00000564236 BAG6P46379 1132 aa23.92■■□□□ 1.42
CCNF-203ENST00000564236 THRAP3Q9Y2W1 955 aaKnown RBP23.92■■□□□ 1.42
CCNF-203ENST00000564236 COL5A2P05997 1499 aaPredicted RBP23.92■■□□□ 1.42
CCNF-203ENST00000564236 AATKQ6ZMQ8 1374 aa23.91■■□□□ 1.42
CCNF-203ENST00000564236 PIK3C2AO00443 1686 aa23.91■■□□□ 1.42
CCNF-203ENST00000564236 EVA1CP58658 441 aa23.9■■□□□ 1.42
CCNF-203ENST00000564236 NLRP6P59044 892 aa23.9■■□□□ 1.42
CCNF-203ENST00000564236 LARP1Q6PKG0 1096 aaKnown RBP23.9■■□□□ 1.42
CCNF-203ENST00000564236 RGPD1P0DJD0 1748 aa23.9■■□□□ 1.42
CCNF-203ENST00000564236 TCP11L2Q8N4U5 519 aa23.89■■□□□ 1.41
CCNF-203ENST00000564236 TTC21AQ8NDW8 1320 aa23.88■■□□□ 1.41
CCNF-203ENST00000564236 FAM196AQ6ZSG2 479 aa23.88■■□□□ 1.41
CCNF-203ENST00000564236 TTC21BQ7Z4L5 1316 aa23.87■■□□□ 1.41
CCNF-203ENST00000564236 AKAP12Q02952 1782 aa23.86■■□□□ 1.41
CCNF-203ENST00000564236 FAM182BQ5T319 152 aa23.86■■□□□ 1.41
CCNF-203ENST00000564236 CRB1P82279 1406 aa23.85■■□□□ 1.41
CCNF-203ENST00000564236 TNS1Q9HBL0 1735 aaKnown RBP23.85■■□□□ 1.41
CCNF-203ENST00000564236 CARD11Q9BXL7 1154 aa23.84■■□□□ 1.41
CCNF-203ENST00000564236 TONSLQ96HA7 1378 aa23.83■■□□□ 1.41
CCNF-203ENST00000564236 KCNH5Q8NCM2 988 aa23.83■■□□□ 1.41
CCNF-203ENST00000564236 USP35Q9P2H5 1018 aa23.83■■□□□ 1.41
CCNF-203ENST00000564236 COL18A1P39060 1754 aa23.83■■□□□ 1.4
CCNF-203ENST00000564236 ARHGEF25Q86VW2 580 aa23.82■■□□□ 1.4
CCNF-203ENST00000564236 PUS7Q96PZ0 661 aaKnown RBP23.82■■□□□ 1.4
CCNF-203ENST00000564236 EN1Q05925 392 aaPredicted RBP23.81■■□□□ 1.4
CCNF-203ENST00000564236 PARP4Q9UKK3 1724 aaKnown RBP23.81■■□□□ 1.4
CCNF-203ENST00000564236 CD163L1Q9NR16 1453 aa23.81■■□□□ 1.4
CCNF-203ENST00000564236 KTN1Q86UP2 1357 aaKnown RBP23.8■■□□□ 1.4
CCNF-203ENST00000564236 PARD3Q8TEW0 1356 aa23.8■■□□□ 1.4
CCNF-203ENST00000564236 ABCC6O95255 1503 aa23.8■■□□□ 1.4
CCNF-203ENST00000564236 PDE3BQ13370 1112 aa23.8■■□□□ 1.4
CCNF-203ENST00000564236 NFAT5O94916 1531 aa23.79■■□□□ 1.4
CCNF-203ENST00000564236 USP31Q70CQ4 1352 aa23.79■■□□□ 1.4
CCNF-203ENST00000564236 C11orf95C9JLR9 678 aaPredicted RBP23.79■■□□□ 1.4
CCNF-203ENST00000564236 MON2Q7Z3U7 1717 aa23.79■■□□□ 1.4
CCNF-203ENST00000564236 CAMKK2Q96RR4 588 aa23.78■■□□□ 1.4
CCNF-203ENST00000564236 AXIN2Q9Y2T1 843 aa23.78■■□□□ 1.4
CCNF-203ENST00000564236 USP54Q70EL1 1684 aa23.78■■□□□ 1.4
CCNF-203ENST00000564236 WDR17Q8IZU2 1322 aa23.78■■□□□ 1.4
CCNF-203ENST00000564236 LRP5O75197 1615 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms