RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 GRPEL1Q9HAV7 217 aa12.94□□□□□ -0.34
RNF40-204ENST00000563683 HMMRO75330 724 aa12.94□□□□□ -0.34
RNF40-204ENST00000563683 TPM2P07951 284 aa12.94□□□□□ -0.34
RNF40-204ENST00000563683 PANK2Q9BZ23 570 aa12.94□□□□□ -0.34
RNF40-204ENST00000563683 API5Q9BZZ5 524 aaKnown RBP12.94□□□□□ -0.34
RNF40-204ENST00000563683 NPC1L1Q9UHC9 1359 aa12.94□□□□□ -0.34
RNF40-204ENST00000563683 TNNQ9UQP3 1299 aa12.94□□□□□ -0.34
RNF40-204ENST00000563683 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.93□□□□□ -0.34
RNF40-204ENST00000563683 DMRT2Q9Y5R5 561 aa12.93□□□□□ -0.34
RNF40-204ENST00000563683 ASXL2Q76L83 1435 aa12.93□□□□□ -0.34
RNF40-204ENST00000563683 PTMSP20962 102 aa12.93□□□□□ -0.34
RNF40-204ENST00000563683 TWISTNBQ3B726 338 aaPredicted RBP12.93□□□□□ -0.34
RNF40-204ENST00000563683 TMEM57Q8N5G2 664 aa12.93□□□□□ -0.34
RNF40-204ENST00000563683 KCNJ4P48050 445 aa12.93□□□□□ -0.34
RNF40-204ENST00000563683 SULT6B1Q6IMI4 303 aa12.93□□□□□ -0.34
RNF40-204ENST00000563683 ASXL1Q8IXJ9 1541 aa12.93□□□□□ -0.34
RNF40-204ENST00000563683 SLC26A8Q96RN1 970 aa12.93□□□□□ -0.34
RNF40-204ENST00000563683 MAGI2Q86UL8 1455 aa12.92□□□□□ -0.34
RNF40-204ENST00000563683 WDR7Q9Y4E6 1490 aa12.92□□□□□ -0.34
RNF40-204ENST00000563683 FOXD4L5Q5VV16 416 aaPredicted RBP12.92□□□□□ -0.34
RNF40-204ENST00000563683 FOXD4L4Q8WXT5 416 aaPredicted RBP12.92□□□□□ -0.34
RNF40-204ENST00000563683 CDC42BPAQ5VT25 1732 aa12.91□□□□□ -0.34
RNF40-204ENST00000563683 ATAD2Q6PL18 1390 aa12.91□□□□□ -0.34
RNF40-204ENST00000563683 DCTN1Q14203 1278 aa12.91□□□□□ -0.34
RNF40-204ENST00000563683 MCCP23508 829 aa12.91□□□□□ -0.34
RNF40-204ENST00000563683 EMILIN1Q9Y6C2 1016 aa12.91□□□□□ -0.34
RNF40-204ENST00000563683 RTEL1-TNFRSF6BF6WH68 1400 aa12.91□□□□□ -0.34
RNF40-204ENST00000563683 ABCA8O94911 1581 aa12.91□□□□□ -0.34
RNF40-204ENST00000563683 ARHGEF5Q12774 1597 aa12.91□□□□□ -0.34
RNF40-204ENST00000563683 FCHSD2O94868 740 aa12.9□□□□□ -0.34
RNF40-204ENST00000563683 EIF2S2P20042 333 aaKnown RBP12.9□□□□□ -0.34
RNF40-204ENST00000563683 RILPL2Q969X0 211 aa12.9□□□□□ -0.34
RNF40-204ENST00000563683 NME9Q86XW9 330 aa12.9□□□□□ -0.34
RNF40-204ENST00000563683 CFAP44Q96MT7 982 aa12.9□□□□□ -0.34
RNF40-204ENST00000563683 TSPYL4Q9UJ04 414 aa12.9□□□□□ -0.34
RNF40-204ENST00000563683 PCDHB15Q9Y5E8 787 aa12.9□□□□□ -0.34
RNF40-204ENST00000563683 SKOR2Q2VWA4 1001 aaPredicted RBP12.9□□□□□ -0.34
RNF40-204ENST00000563683 PLCB2Q00722 1185 aa12.89□□□□□ -0.35
RNF40-204ENST00000563683 TRIM27P14373 513 aa12.89□□□□□ -0.35
RNF40-204ENST00000563683 FKBP5Q13451 457 aaPredicted RBP12.89□□□□□ -0.35
RNF40-204ENST00000563683 SYNMO15061 1565 aa12.89□□□□□ -0.35
RNF40-204ENST00000563683 NLRP6P59044 892 aa12.89□□□□□ -0.35
RNF40-204ENST00000563683 PLXNC1O60486 1568 aa12.89□□□□□ -0.35
RNF40-204ENST00000563683 FYB1O15117 783 aa12.88□□□□□ -0.35
RNF40-204ENST00000563683 PTMAP06454 111 aaKnown RBP12.88□□□□□ -0.35
RNF40-204ENST00000563683 NUDT16Q96DE0 195 aaKnown RBP12.88□□□□□ -0.35
RNF40-204ENST00000563683 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.88□□□□□ -0.35
RNF40-204ENST00000563683 RLBP1P12271 317 aa12.88□□□□□ -0.35
RNF40-204ENST00000563683 CCDC61Q9Y6R9 512 aa12.88□□□□□ -0.35
RNF40-204ENST00000563683 PDCL3Q9H2J4 239 aa12.88□□□□□ -0.35
RNF40-204ENST00000563683 CT47B1P0C2W7 299 aaPredicted RBP12.88□□□□□ -0.35
RNF40-204ENST00000563683 CFAP65Q6ZU64 1925 aaKnown RBP12.87□□□□□ -0.35
RNF40-204ENST00000563683 PLA2R1Q13018 1463 aa12.87□□□□□ -0.35
RNF40-204ENST00000563683 SAMD9LQ8IVG5 1584 aa12.87□□□□□ -0.35
RNF40-204ENST00000563683 FOXD4L6Q3SYB3 417 aaPredicted RBP12.87□□□□□ -0.35
RNF40-204ENST00000563683 FOXD4L3Q6VB84 417 aaPredicted RBP12.87□□□□□ -0.35
RNF40-204ENST00000563683 KIAA1211Q6ZU35 1233 aa12.87□□□□□ -0.35
RNF40-204ENST00000563683 NFE2L2Q16236 605 aa12.86□□□□□ -0.35
RNF40-204ENST00000563683 TAOK2Q9UL54 1235 aa12.86□□□□□ -0.35
RNF40-204ENST00000563683 CIZ1Q9ULV3 898 aaPredicted RBP12.86□□□□□ -0.35
RNF40-204ENST00000563683 MIS18AQ9NYP9 233 aa12.85□□□□□ -0.35
RNF40-204ENST00000563683 ST18O60284 1047 aa12.85□□□□□ -0.35
RNF40-204ENST00000563683 SLC4A2P04920 1241 aa12.85□□□□□ -0.35
RNF40-204ENST00000563683 CSB-PGBD3P0DP91 1061 aa12.85□□□□□ -0.35
RNF40-204ENST00000563683 CHD1LQ86WJ1 897 aa12.85□□□□□ -0.35
RNF40-204ENST00000563683 DDX49Q9Y6V7 483 aaKnown RBP12.84□□□□□ -0.35
RNF40-204ENST00000563683 POLR3AO14802 1390 aaPredicted RBP12.84□□□□□ -0.35
RNF40-204ENST00000563683 FGD1P98174 961 aa12.84□□□□□ -0.35
RNF40-204ENST00000563683 CCDC173Q0VFZ6 552 aa12.83□□□□□ -0.35
RNF40-204ENST00000563683 TEFQ10587 303 aa12.83□□□□□ -0.35
RNF40-204ENST00000563683 MCM10Q7L590 875 aa12.83□□□□□ -0.35
RNF40-204ENST00000563683 ZNF692Q9BU19 519 aaPredicted RBP12.83□□□□□ -0.35
RNF40-204ENST00000563683 ATP10AO60312 1499 aa12.83□□□□□ -0.36
RNF40-204ENST00000563683 FAM83GA6ND36 823 aa12.83□□□□□ -0.36
RNF40-204ENST00000563683 RNF17Q9BXT8 1623 aaKnown RBP12.83□□□□□ -0.36
RNF40-204ENST00000563683 MAST1Q9Y2H9 1570 aa12.83□□□□□ -0.36
RNF40-204ENST00000563683 ZNF518AQ6AHZ1 1483 aa12.82□□□□□ -0.36
RNF40-204ENST00000563683 NAP1L2Q9ULW6 460 aaPredicted RBP12.82□□□□□ -0.36
RNF40-204ENST00000563683 UNC13BO14795 1591 aa12.82□□□□□ -0.36
RNF40-204ENST00000563683 ANKRD36BQ8N2N9 1353 aa12.82□□□□□ -0.36
RNF40-204ENST00000563683 MYO5CQ9NQX4 1742 aa12.82□□□□□ -0.36
RNF40-204ENST00000563683 ABTB2Q8N961 1025 aa12.82□□□□□ -0.36
RNF40-204ENST00000563683 SNX21Q969T3 373 aa12.82□□□□□ -0.36
RNF40-204ENST00000563683 GCC1Q96CN9 775 aa12.82□□□□□ -0.36
RNF40-204ENST00000563683 ZRANB1Q9UGI0 708 aa12.82□□□□□ -0.36
RNF40-204ENST00000563683 WASLO00401 505 aaPredicted RBP12.81□□□□□ -0.36
RNF40-204ENST00000563683 PSME1Q06323 249 aa12.81□□□□□ -0.36
RNF40-204ENST00000563683 MSNP26038 577 aaKnown RBP12.81□□□□□ -0.36
RNF40-204ENST00000563683 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.81□□□□□ -0.36
RNF40-204ENST00000563683 TTC37Q6PGP7 1564 aa12.81□□□□□ -0.36
RNF40-204ENST00000563683 CDC45O75419 566 aa12.81□□□□□ -0.36
RNF40-204ENST00000563683 DNTTIP2Q5QJE6 756 aaKnown RBP12.81□□□□□ -0.36
RNF40-204ENST00000563683 ANO2Q9NQ90 1003 aa12.81□□□□□ -0.36
RNF40-204ENST00000563683 ZNF330Q9Y3S2 320 aaPredicted RBP12.81□□□□□ -0.36
RNF40-204ENST00000563683 MAP7D2Q96T17 732 aa12.8□□□□□ -0.36
RNF40-204ENST00000563683 ERBB4Q15303 1308 aa12.8□□□□□ -0.36
RNF40-204ENST00000563683 REC8O95072 547 aa12.8□□□□□ -0.36
RNF40-204ENST00000563683 CEBPAP49715 358 aaPredicted RBP12.8□□□□□ -0.36
RNF40-204ENST00000563683 TERF1P54274 439 aa12.8□□□□□ -0.36
RNF40-204ENST00000563683 INTS3Q68E01 1043 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms