RNA–Protein interactions for RNA: ENST00000563673.5

FANCA-213, Transcript of FA complementation group A, humanhuman

TSL 1 (best) BASIC

Gene FANCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-213ENST00000563673 ALS2Q96Q42 1657 aa21.13■□□□□ 0.97
FANCA-213ENST00000563673 USP21Q9UK80 565 aa21.13■□□□□ 0.97
FANCA-213ENST00000563673 TESK2Q96S53 571 aa21.12■□□□□ 0.97
FANCA-213ENST00000563673 USP47Q96K76 1375 aa21.12■□□□□ 0.97
FANCA-213ENST00000563673 QTRT2Q9H974 415 aaKnown RBP21.12■□□□□ 0.97
FANCA-213ENST00000563673 SLC24A1O60721 1099 aa21.1■□□□□ 0.97
FANCA-213ENST00000563673 RXRBP28702 533 aa21.1■□□□□ 0.97
FANCA-213ENST00000563673 USP6P35125 1406 aa21.09■□□□□ 0.97
FANCA-213ENST00000563673 ABTB2Q8N961 1025 aa21.09■□□□□ 0.97
FANCA-213ENST00000563673 BRD4O60885 1362 aaPredicted RBP21.09■□□□□ 0.97
FANCA-213ENST00000563673 NUTM2GQ5VZR2 741 aa21.09■□□□□ 0.97
FANCA-213ENST00000563673 MARF1Q9Y4F3 1742 aaKnown RBP21.08■□□□□ 0.97
FANCA-213ENST00000563673 PUS7Q96PZ0 661 aaKnown RBP21.08■□□□□ 0.96
FANCA-213ENST00000563673 ZNF692Q9BU19 519 aaPredicted RBP21.08■□□□□ 0.96
FANCA-213ENST00000563673 TRPC5Q9UL62 973 aaPredicted RBP21.07■□□□□ 0.96
FANCA-213ENST00000563673 BCL9LQ86UU0 1499 aa21.07■□□□□ 0.96
FANCA-213ENST00000563673 ABCA3Q99758 1704 aa21.06■□□□□ 0.96
FANCA-213ENST00000563673 RBM6P78332 1123 aaKnown RBP21.05■□□□□ 0.96
FANCA-213ENST00000563673 TMC1Q8TDI8 760 aa21.05■□□□□ 0.96
FANCA-213ENST00000563673 SLIT2O94813 1529 aa21.05■□□□□ 0.96
FANCA-213ENST00000563673 FAM83GA6ND36 823 aa21.05■□□□□ 0.96
FANCA-213ENST00000563673 UNC5CLQ8IV45 518 aa21.04■□□□□ 0.96
FANCA-213ENST00000563673 CPSF1Q10570 1443 aaKnown RBP21.04■□□□□ 0.96
FANCA-213ENST00000563673 SSH2Q76I76 1423 aa21.04■□□□□ 0.96
FANCA-213ENST00000563673 NLRP13Q86W25 1043 aa21.03■□□□□ 0.96
FANCA-213ENST00000563673 ATRNO75882 1429 aa21.03■□□□□ 0.96
FANCA-213ENST00000563673 TMF1P82094 1093 aa21.02■□□□□ 0.96
FANCA-213ENST00000563673 SLC12A5Q9H2X9 1139 aa21.02■□□□□ 0.96
FANCA-213ENST00000563673 CRYBG1Q9Y4K1 1723 aa21.01■□□□□ 0.95
FANCA-213ENST00000563673 KTN1Q86UP2 1357 aaKnown RBP21.01■□□□□ 0.95
FANCA-213ENST00000563673 USP19O94966 1318 aa21.01■□□□□ 0.95
FANCA-213ENST00000563673 TTC21BQ7Z4L5 1316 aa21.01■□□□□ 0.95
FANCA-213ENST00000563673 CDK12Q9NYV4 1490 aaPredicted RBP21■□□□□ 0.95
FANCA-213ENST00000563673 NLRP6P59044 892 aa21■□□□□ 0.95
FANCA-213ENST00000563673 PRDM11Q9NQV5 511 aa21■□□□□ 0.95
FANCA-213ENST00000563673 HDGFL2Q7Z4V5 671 aaPredicted RBP20.99■□□□□ 0.95
FANCA-213ENST00000563673 CD163L1Q9NR16 1453 aa20.99■□□□□ 0.95
FANCA-213ENST00000563673 KIAA0232Q92628 1395 aa20.98■□□□□ 0.95
FANCA-213ENST00000563673 ZC3H6P61129 1189 aaKnown RBP20.98■□□□□ 0.95
FANCA-213ENST00000563673 GJD4Q96KN9 370 aaPredicted RBP20.98■□□□□ 0.95
FANCA-213ENST00000563673 BTG4Q9NY30 223 aa20.98■□□□□ 0.95
FANCA-213ENST00000563673 TERF2IPQ9NYB0 399 aa20.98■□□□□ 0.95
FANCA-213ENST00000563673 TTC21AQ8NDW8 1320 aa20.98■□□□□ 0.95
FANCA-213ENST00000563673 NINLQ9Y2I6 1382 aa20.98■□□□□ 0.95
FANCA-213ENST00000563673 AKAP12Q02952 1782 aa20.97■□□□□ 0.95
FANCA-213ENST00000563673 GCP02774 474 aa20.97■□□□□ 0.95
FANCA-213ENST00000563673 PHRF1Q9P1Y6 1649 aaKnown RBP20.97■□□□□ 0.95
FANCA-213ENST00000563673 CDCA8Q53HL2 280 aa20.96■□□□□ 0.95
FANCA-213ENST00000563673 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.96■□□□□ 0.95
FANCA-213ENST00000563673 PLCH1Q4KWH8 1693 aa20.96■□□□□ 0.95
FANCA-213ENST00000563673 RGS12O14924 1447 aa20.96■□□□□ 0.95
FANCA-213ENST00000563673 VPS72Q15906 364 aa20.96■□□□□ 0.95
FANCA-213ENST00000563673 A0A1W2PP64 1363 aa20.95■□□□□ 0.94
FANCA-213ENST00000563673 EIF4G2P78344 907 aaKnown RBP eCLIP20.95■□□□□ 0.94
FANCA-213ENST00000563673 CHRNA2Q15822 529 aa20.95■□□□□ 0.94
FANCA-213ENST00000563673 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.95■□□□□ 0.94
FANCA-213ENST00000563673 COL14A1Q05707 1796 aaKnown RBP20.95■□□□□ 0.94
FANCA-213ENST00000563673 NWD2Q9ULI1 1742 aa20.95■□□□□ 0.94
FANCA-213ENST00000563673 NRKQ7Z2Y5 1582 aa20.94■□□□□ 0.94
FANCA-213ENST00000563673 CPDO75976 1380 aa20.94■□□□□ 0.94
FANCA-213ENST00000563673 PIK3C2AO00443 1686 aa20.93■□□□□ 0.94
FANCA-213ENST00000563673 CCDC9Q9Y3X0 531 aaKnown RBP20.93■□□□□ 0.94
FANCA-213ENST00000563673 MON2Q7Z3U7 1717 aa20.92■□□□□ 0.94
FANCA-213ENST00000563673 EDC4Q6P2E9 1401 aaKnown RBP20.92■□□□□ 0.94
FANCA-213ENST00000563673 HSPA5P11021 654 aaKnown RBP20.91■□□□□ 0.94
FANCA-213ENST00000563673 SLIT3O75094 1523 aa20.91■□□□□ 0.94
FANCA-213ENST00000563673 NME9Q86XW9 330 aa20.89■□□□□ 0.94
FANCA-213ENST00000563673 KCNH5Q8NCM2 988 aa20.89■□□□□ 0.94
FANCA-213ENST00000563673 GLI3P10071 1580 aa20.89■□□□□ 0.93
FANCA-213ENST00000563673 ANKRD36BQ8N2N9 1353 aa20.89■□□□□ 0.93
FANCA-213ENST00000563673 NRAPQ86VF7 1730 aa20.88■□□□□ 0.93
FANCA-213ENST00000563673 ZRANB1Q9UGI0 708 aa20.88■□□□□ 0.93
FANCA-213ENST00000563673 USP31Q70CQ4 1352 aa20.88■□□□□ 0.93
FANCA-213ENST00000563673 STRN4Q9NRL3 753 aa20.87■□□□□ 0.93
FANCA-213ENST00000563673 ZBTB7CA1YPR0 619 aa20.86■□□□□ 0.93
FANCA-213ENST00000563673 SOX12O15370 315 aa20.86■□□□□ 0.93
FANCA-213ENST00000563673 EVA1CP58658 441 aa20.85■□□□□ 0.93
FANCA-213ENST00000563673 SPATA31A5Q5VU36 1347 aa20.85■□□□□ 0.93
FANCA-213ENST00000563673 SPATA31A7Q8IWB4 1347 aa20.85■□□□□ 0.93
FANCA-213ENST00000563673 ONECUT3O60422 494 aaPredicted RBP20.84■□□□□ 0.93
FANCA-213ENST00000563673 AATKQ6ZMQ8 1374 aa20.84■□□□□ 0.93
FANCA-213ENST00000563673 CAMTA1Q9Y6Y1 1673 aa20.84■□□□□ 0.93
FANCA-213ENST00000563673 ARHGEF25Q86VW2 580 aa20.83■□□□□ 0.93
FANCA-213ENST00000563673 SEPT12Q8IYM1 358 aa20.83■□□□□ 0.92
FANCA-213ENST00000563673 FAM98CQ17RN3 349 aaKnown RBP20.82■□□□□ 0.92
FANCA-213ENST00000563673 POLR3GLQ9BT43 218 aa20.82■□□□□ 0.92
FANCA-213ENST00000563673 LMO7Q8WWI1 1683 aa20.82■□□□□ 0.92
FANCA-213ENST00000563673 SPATA31A1Q5TZJ5 1347 aa20.81■□□□□ 0.92
FANCA-213ENST00000563673 NFAT5O94916 1531 aa20.8■□□□□ 0.92
FANCA-213ENST00000563673 LARP1Q6PKG0 1096 aaKnown RBP20.8■□□□□ 0.92
FANCA-213ENST00000563673 UPF1Q92900 1129 aaKnown RBP eCLIP20.8■□□□□ 0.925e-8■□□□□ 10.9
FANCA-213ENST00000563673 OVOS2A0A0J9YW53 1432 aa20.8■□□□□ 0.92
FANCA-213ENST00000563673 OVOS2Q6IE36 1432 aa20.8■□□□□ 0.92
FANCA-213ENST00000563673 USP54Q70EL1 1684 aa20.8■□□□□ 0.92
FANCA-213ENST00000563673 COL5A2P05997 1499 aaPredicted RBP20.79■□□□□ 0.92
FANCA-213ENST00000563673 A0A0G2JS52 829 aa20.79■□□□□ 0.92
FANCA-213ENST00000563673 MYT1Q01538 1121 aa20.79■□□□□ 0.92
FANCA-213ENST00000563673 COG3Q96JB2 828 aa20.79■□□□□ 0.92
FANCA-213ENST00000563673 AXIN2Q9Y2T1 843 aa20.79■□□□□ 0.92
FANCA-213ENST00000563673 USP35Q9P2H5 1018 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms