RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 ZNF784Q8NCA9 323 aaPredicted RBP27.39■■□□□ 1.98
E4F1-203ENST00000563643 KCNQ2O43526 872 aa27.38■■□□□ 1.97
E4F1-203ENST00000563643 CAMTA1Q9Y6Y1 1673 aa27.37■■□□□ 1.97
E4F1-203ENST00000563643 YTHDC2Q9H6S0 1430 aaKnown RBP27.36■■□□□ 1.97
E4F1-203ENST00000563643 SPATA31A1Q5TZJ5 1347 aa27.34■■□□□ 1.97
E4F1-203ENST00000563643 PMFBP1Q8TBY8 1022 aa27.33■■□□□ 1.97
E4F1-203ENST00000563643 TRPM3Q9HCF6 1732 aaPredicted RBP27.31■■□□□ 1.96
E4F1-203ENST00000563643 SIRT1Q96EB6 747 aa27.3■■□□□ 1.96
E4F1-203ENST00000563643 ALS2Q96Q42 1657 aa27.3■■□□□ 1.96
E4F1-203ENST00000563643 PRDM11Q9NQV5 511 aa27.29■■□□□ 1.96
E4F1-203ENST00000563643 PIK3C2GO75747 1445 aa27.29■■□□□ 1.96
E4F1-203ENST00000563643 ANKRD30BQ9BXX2 1392 aa27.28■■□□□ 1.96
E4F1-203ENST00000563643 ANKARQ7Z5J8 1434 aa27.27■■□□□ 1.96
E4F1-203ENST00000563643 C1QTNF8P60827 252 aa27.25■■□□□ 1.95
E4F1-203ENST00000563643 CRYBG1Q9Y4K1 1723 aa27.24■■□□□ 1.95
E4F1-203ENST00000563643 GPRASP1Q5JY77 1395 aa27.24■■□□□ 1.95
E4F1-203ENST00000563643 RGL3Q3MIN7 710 aa27.24■■□□□ 1.95
E4F1-203ENST00000563643 PDE3BQ13370 1112 aa27.23■■□□□ 1.95
E4F1-203ENST00000563643 SLC4A1APQ9BWU0 796 aaKnown RBP27.23■■□□□ 1.95
E4F1-203ENST00000563643 STRN4Q9NRL3 753 aa27.23■■□□□ 1.95
E4F1-203ENST00000563643 SAFB2Q14151 953 aaKnown RBP eCLIP27.22■■□□□ 1.95
E4F1-203ENST00000563643 SPATA31E1Q6ZUB1 1445 aa27.22■■□□□ 1.95
E4F1-203ENST00000563643 NRKQ7Z2Y5 1582 aa27.22■■□□□ 1.95
E4F1-203ENST00000563643 ACIN1Q9UKV3 1341 aaKnown RBP27.2■■□□□ 1.95
E4F1-203ENST00000563643 USP35Q9P2H5 1018 aa27.2■■□□□ 1.94
E4F1-203ENST00000563643 KIAA0232Q92628 1395 aa27.2■■□□□ 1.94
E4F1-203ENST00000563643 PRAM1Q96QH2 718 aa27.19■■□□□ 1.94
E4F1-203ENST00000563643 CHRNA2Q15822 529 aa27.18■■□□□ 1.94
E4F1-203ENST00000563643 BARGINQ6ZT62 677 aa27.18■■□□□ 1.94
E4F1-203ENST00000563643 CEP350Q5VT06 3117 aa27.16■■□□□ 1.94
E4F1-203ENST00000563643 CASZ1Q86V15 1759 aa27.14■■□□□ 1.94
E4F1-203ENST00000563643 DHX57Q6P158 1386 aaKnown RBP27.14■■□□□ 1.94
E4F1-203ENST00000563643 PAK3O75914 559 aaPredicted RBP27.13■■□□□ 1.93
E4F1-203ENST00000563643 ANO8Q9HCE9 1232 aaPredicted RBP27.13■■□□□ 1.93
E4F1-203ENST00000563643 MYOM1P52179 1685 aa27.13■■□□□ 1.93
E4F1-203ENST00000563643 SSH2Q76I76 1423 aa27.13■■□□□ 1.93
E4F1-203ENST00000563643 C14orf93Q9H972 538 aaKnown RBP27.12■■□□□ 1.93
E4F1-203ENST00000563643 PDGFDQ9GZP0 370 aaPredicted RBP27.1■■□□□ 1.93
E4F1-203ENST00000563643 PRR36Q9H6K5 1346 aa27.1■■□□□ 1.93
E4F1-203ENST00000563643 ZBTB7AO95365 584 aa27.09■■□□□ 1.93
E4F1-203ENST00000563643 PTGER2P43116 358 aa27.09■■□□□ 1.93
E4F1-203ENST00000563643 POGKQ9P215 609 aa27.09■■□□□ 1.93
E4F1-203ENST00000563643 ZC3H6P61129 1189 aaKnown RBP27.08■■□□□ 1.93
E4F1-203ENST00000563643 PHRF1Q9P1Y6 1649 aaKnown RBP27.08■■□□□ 1.93
E4F1-203ENST00000563643 RGPD3A6NKT7 1758 aaPredicted RBP27.07■■□□□ 1.92
E4F1-203ENST00000563643 RGPD4Q7Z3J3 1758 aa27.07■■□□□ 1.92
E4F1-203ENST00000563643 DLC1Q96QB1 1528 aa27.07■■□□□ 1.92
E4F1-203ENST00000563643 EVA1CP58658 441 aa27.07■■□□□ 1.92
E4F1-203ENST00000563643 CFAP70Q5T0N1 1121 aa27.07■■□□□ 1.92
E4F1-203ENST00000563643 TCP11L2Q8N4U5 519 aa27.07■■□□□ 1.92
E4F1-203ENST00000563643 NGDNQ8NEJ9 315 aaKnown RBP27.07■■□□□ 1.92
E4F1-203ENST00000563643 EIF3AQ14152 1382 aaKnown RBP27.07■■□□□ 1.92
E4F1-203ENST00000563643 TULP4Q9NRJ4 1543 aa27.06■■□□□ 1.92
E4F1-203ENST00000563643 HIRIP3Q9BW71 556 aaPredicted RBP27.06■■□□□ 1.92
E4F1-203ENST00000563643 PLSCR1O15162 318 aa27.05■■□□□ 1.92
E4F1-203ENST00000563643 LARP1Q6PKG0 1096 aaKnown RBP27.05■■□□□ 1.92
E4F1-203ENST00000563643 SYT17Q9BSW7 474 aa27.05■■□□□ 1.92
E4F1-203ENST00000563643 FHDC1Q9C0D6 1143 aaPredicted RBP27.05■■□□□ 1.92
E4F1-203ENST00000563643 C11orf95C9JLR9 678 aaPredicted RBP27.04■■□□□ 1.92
E4F1-203ENST00000563643 PPARGC1BQ86YN6 1023 aaKnown RBP27.03■■□□□ 1.92
E4F1-203ENST00000563643 OVOS2A0A0G2JMS6 1433 aa27.02■■□□□ 1.92
E4F1-203ENST00000563643 OVOS2A0A0J9YW53 1432 aa27.02■■□□□ 1.92
E4F1-203ENST00000563643 OVOS2Q6IE36 1432 aa27.02■■□□□ 1.92
E4F1-203ENST00000563643 ATF5Q9Y2D1 282 aaPredicted RBP27.02■■□□□ 1.92
E4F1-203ENST00000563643 CHD4Q14839 1912 aa27.02■■□□□ 1.92
E4F1-203ENST00000563643 PARP4Q9UKK3 1724 aaKnown RBP27■■□□□ 1.91
E4F1-203ENST00000563643 BCL11BQ9C0K0 894 aaPredicted RBP27■■□□□ 1.91
E4F1-203ENST00000563643 THRAP3Q9Y2W1 955 aaKnown RBP27■■□□□ 1.91
E4F1-203ENST00000563643 PEAK1Q9H792 1746 aa26.99■■□□□ 1.91
E4F1-203ENST00000563643 MINK1Q8N4C8 1332 aaPredicted RBP26.99■■□□□ 1.91
E4F1-203ENST00000563643 ATP7BP35670 1465 aa26.99■■□□□ 1.91
E4F1-203ENST00000563643 GIGYF1O75420 1035 aaPredicted RBP26.98■■□□□ 1.91
E4F1-203ENST00000563643 WASLO00401 505 aaPredicted RBP26.96■■□□□ 1.91
E4F1-203ENST00000563643 NUTM2GQ5VZR2 741 aa26.96■■□□□ 1.91
E4F1-203ENST00000563643 LMO7Q8WWI1 1683 aa26.95■■□□□ 1.91
E4F1-203ENST00000563643 PROM2Q8N271 834 aa26.94■■□□□ 1.9
E4F1-203ENST00000563643 PTF1AQ7RTS3 328 aa26.93■■□□□ 1.9
E4F1-203ENST00000563643 TRAK1Q9UPV9 953 aa26.92■■□□□ 1.9
E4F1-203ENST00000563643 CPDO75976 1380 aa26.92■■□□□ 1.9
E4F1-203ENST00000563643 GOLGB1Q14789 3259 aaKnown RBP26.92■■□□□ 1.9
E4F1-203ENST00000563643 SGIP1Q9BQI5 828 aa26.91■■□□□ 1.9
E4F1-203ENST00000563643 MTFR1LQ9H019 292 aa26.91■■□□□ 1.9
E4F1-203ENST00000563643 ADGRB1O14514 1584 aa26.91■■□□□ 1.9
E4F1-203ENST00000563643 STK32BQ9NY57 414 aa26.9■■□□□ 1.9
E4F1-203ENST00000563643 SBF2Q86WG5 1849 aa26.9■■□□□ 1.9
E4F1-203ENST00000563643 COL5A2P05997 1499 aaPredicted RBP26.89■■□□□ 1.9
E4F1-203ENST00000563643 LRRC37A3O60309 1634 aa26.89■■□□□ 1.9
E4F1-203ENST00000563643 SLC15A2Q16348 729 aa26.87■■□□□ 1.89
E4F1-203ENST00000563643 CRB1P82279 1406 aa26.87■■□□□ 1.89
E4F1-203ENST00000563643 ITSN1Q15811 1721 aa26.87■■□□□ 1.89
E4F1-203ENST00000563643 MAP3K5Q99683 1374 aa26.85■■□□□ 1.89
E4F1-203ENST00000563643 DDB1Q16531 1140 aa26.85■■□□□ 1.89
E4F1-203ENST00000563643 ARXQ96QS3 562 aa26.84■■□□□ 1.89
E4F1-203ENST00000563643 TXNRD1Q16881 649 aa26.83■■□□□ 1.89
E4F1-203ENST00000563643 NUDT16Q96DE0 195 aaKnown RBP26.83■■□□□ 1.89
E4F1-203ENST00000563643 MPHOSPH9Q99550 1183 aa26.83■■□□□ 1.89
E4F1-203ENST00000563643 USP19O94966 1318 aa26.83■■□□□ 1.89
E4F1-203ENST00000563643 GPR162Q16538 588 aa26.82■■□□□ 1.88
E4F1-203ENST00000563643 POLR3AO14802 1390 aaPredicted RBP26.81■■□□□ 1.88
E4F1-203ENST00000563643 ABTB2Q8N961 1025 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms