RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 TONSLQ96HA7 1378 aa8.11□□□□□ -1.11
LINC01963-201ENST00000562038 HOMEZQ8IX15 550 aa8.11□□□□□ -1.11
LINC01963-201ENST00000562038 PARP4Q9UKK3 1724 aaKnown RBP8.11□□□□□ -1.11
LINC01963-201ENST00000562038 PAPPAQ13219 1627 aa8.1□□□□□ -1.11
LINC01963-201ENST00000562038 ADGRF5Q8IZF2 1346 aa8.1□□□□□ -1.11
LINC01963-201ENST00000562038 SOS2Q07890 1332 aaPredicted RBP8.1□□□□□ -1.11
LINC01963-201ENST00000562038 LRRC59Q96AG4 307 aaKnown RBP8.09□□□□□ -1.11
LINC01963-201ENST00000562038 PPP1R15AO75807 674 aaPredicted RBP8.09□□□□□ -1.11
LINC01963-201ENST00000562038 SBF2Q86WG5 1849 aa8.09□□□□□ -1.11
LINC01963-201ENST00000562038 ROBO2Q9HCK4 1378 aa8.08□□□□□ -1.12
LINC01963-201ENST00000562038 C10orf71Q711Q0 1435 aa8.08□□□□□ -1.12
LINC01963-201ENST00000562038 BCL11AQ9H165 835 aa8.07□□□□□ -1.12
LINC01963-201ENST00000562038 ADCY9O60503 1353 aa8.07□□□□□ -1.12
LINC01963-201ENST00000562038 ZNF326Q5BKZ1 582 aaKnown RBP8.07□□□□□ -1.12
LINC01963-201ENST00000562038 POLR3AO14802 1390 aaPredicted RBP8.07□□□□□ -1.12
LINC01963-201ENST00000562038 C1orf167Q5SNV9 1468 aa8.07□□□□□ -1.12
LINC01963-201ENST00000562038 FAM208AQ9UK61 1670 aaKnown RBP8.06□□□□□ -1.12
LINC01963-201ENST00000562038 SBNO1A3KN83 1393 aa8.06□□□□□ -1.12
LINC01963-201ENST00000562038 KIF20BQ96Q89 1820 aa8.06□□□□□ -1.12
LINC01963-201ENST00000562038 C19orf44Q9H6X5 657 aa8.06□□□□□ -1.12
LINC01963-201ENST00000562038 BCL9O00512 1426 aa8.06□□□□□ -1.12
LINC01963-201ENST00000562038 PLEKHG2Q9H7P9 1386 aa8.05□□□□□ -1.12
LINC01963-201ENST00000562038 L3MBTL2Q969R5 705 aa8.05□□□□□ -1.12
LINC01963-201ENST00000562038 SLIT3O75094 1523 aa8.05□□□□□ -1.12
LINC01963-201ENST00000562038 DCAF8L1A6NGE4 600 aa8.05□□□□□ -1.12
LINC01963-201ENST00000562038 BRINP3Q76B58 766 aa8.05□□□□□ -1.12
LINC01963-201ENST00000562038 JMYQ8N9B5 988 aa8.05□□□□□ -1.12
LINC01963-201ENST00000562038 AMOTL2Q9Y2J4 779 aa8.05□□□□□ -1.12
LINC01963-201ENST00000562038 RGPD8O14715 1765 aaPredicted RBP8.04□□□□□ -1.12
LINC01963-201ENST00000562038 NUTM2BA6NNL0 878 aaPredicted RBP8.04□□□□□ -1.12
LINC01963-201ENST00000562038 NUTM2EB1AL46 878 aaPredicted RBP8.04□□□□□ -1.12
LINC01963-201ENST00000562038 NUTM2DQ5VT03 806 aaPredicted RBP8.04□□□□□ -1.12
LINC01963-201ENST00000562038 NUTM2AQ8IVF1 878 aaPredicted RBP8.04□□□□□ -1.12
LINC01963-201ENST00000562038 ROCK2O75116 1388 aaKnown RBP8.03□□□□□ -1.12
LINC01963-201ENST00000562038 BAG6P46379 1132 aa8.03□□□□□ -1.12
LINC01963-201ENST00000562038 SSH2Q76I76 1423 aa8.03□□□□□ -1.12
LINC01963-201ENST00000562038 ZEB1P37275 1124 aaPredicted RBP8.03□□□□□ -1.12
LINC01963-201ENST00000562038 DCAF11Q8TEB1 546 aa8.02□□□□□ -1.13
LINC01963-201ENST00000562038 GJD4Q96KN9 370 aaPredicted RBP8.02□□□□□ -1.13
LINC01963-201ENST00000562038 CPSF1Q10570 1443 aaKnown RBP8.02□□□□□ -1.13
LINC01963-201ENST00000562038 C11orf95C9JLR9 678 aaPredicted RBP8.02□□□□□ -1.13
LINC01963-201ENST00000562038 CENPJQ9HC77 1338 aaPredicted RBP8.01□□□□□ -1.13
LINC01963-201ENST00000562038 PIK3C2AO00443 1686 aa8.01□□□□□ -1.13
LINC01963-201ENST00000562038 PROSER2Q86WR7 435 aaPredicted RBP8□□□□□ -1.13
LINC01963-201ENST00000562038 PLEKHG3A1L390 1219 aa8□□□□□ -1.13
LINC01963-201ENST00000562038 CHGAP10645 457 aaKnown RBP8□□□□□ -1.13
LINC01963-201ENST00000562038 HSPA6P17066 643 aa7.99□□□□□ -1.13
LINC01963-201ENST00000562038 CDCA8Q53HL2 280 aa7.99□□□□□ -1.13
LINC01963-201ENST00000562038 USP21Q9UK80 565 aa7.99□□□□□ -1.13
LINC01963-201ENST00000562038 LMO7Q8WWI1 1683 aa7.99□□□□□ -1.13
LINC01963-201ENST00000562038 USP31Q70CQ4 1352 aa7.99□□□□□ -1.13
LINC01963-201ENST00000562038 VPS72Q15906 364 aa7.99□□□□□ -1.13
LINC01963-201ENST00000562038 CFAP70Q5T0N1 1121 aa7.99□□□□□ -1.13
LINC01963-201ENST00000562038 NPC1L1Q9UHC9 1359 aa7.99□□□□□ -1.13
LINC01963-201ENST00000562038 ARHGEF10O15013 1369 aa7.98□□□□□ -1.13
LINC01963-201ENST00000562038 USP47Q96K76 1375 aa7.98□□□□□ -1.13
LINC01963-201ENST00000562038 CD163L1Q9NR16 1453 aa7.98□□□□□ -1.13
LINC01963-201ENST00000562038 TNS3Q68CZ2 1445 aa7.98□□□□□ -1.13
LINC01963-201ENST00000562038 NSD2O96028 1365 aa7.98□□□□□ -1.13
LINC01963-201ENST00000562038 GIGYF1O75420 1035 aaPredicted RBP7.98□□□□□ -1.13
LINC01963-201ENST00000562038 CAMKK2Q96RR4 588 aa7.98□□□□□ -1.13
LINC01963-201ENST00000562038 GTF3C3Q9Y5Q9 886 aa7.98□□□□□ -1.13
LINC01963-201ENST00000562038 KIF24Q5T7B8 1368 aa7.98□□□□□ -1.13
LINC01963-201ENST00000562038 EVC2Q86UK5 1308 aa7.97□□□□□ -1.13
LINC01963-201ENST00000562038 WASLO00401 505 aaPredicted RBP7.97□□□□□ -1.13
LINC01963-201ENST00000562038 NBPF8Q3BBV2 869 aa7.97□□□□□ -1.13
LINC01963-201ENST00000562038 THSD7BQ9C0I4 1608 aa7.97□□□□□ -1.13
LINC01963-201ENST00000562038 COL18A1P39060 1754 aa7.97□□□□□ -1.13
LINC01963-201ENST00000562038 SLC26A8Q96RN1 970 aa7.97□□□□□ -1.13
LINC01963-201ENST00000562038 PCGF6Q9BYE7 350 aa7.97□□□□□ -1.13
LINC01963-201ENST00000562038 PLEKHH1Q9ULM0 1364 aa7.97□□□□□ -1.13
LINC01963-201ENST00000562038 EDC4Q6P2E9 1401 aaKnown RBP7.97□□□□□ -1.13
LINC01963-201ENST00000562038 SF3B2Q13435 895 aaKnown RBP7.96□□□□□ -1.13
LINC01963-201ENST00000562038 KCNQ2O43526 872 aa7.96□□□□□ -1.14
LINC01963-201ENST00000562038 SMG6Q86US8 1419 aaKnown RBP7.96□□□□□ -1.14
LINC01963-201ENST00000562038 TNRC6CQ9HCJ0 1690 aaKnown RBP7.96□□□□□ -1.14
LINC01963-201ENST00000562038 TESK2Q96S53 571 aa7.96□□□□□ -1.14
LINC01963-201ENST00000562038 SIN3AQ96ST3 1273 aa7.96□□□□□ -1.14
LINC01963-201ENST00000562038 TTC21AQ8NDW8 1320 aa7.95□□□□□ -1.14
LINC01963-201ENST00000562038 RGS19P49795 217 aa7.95□□□□□ -1.14
LINC01963-201ENST00000562038 USP6P35125 1406 aa7.95□□□□□ -1.14
LINC01963-201ENST00000562038 TNS2Q63HR2 1409 aa7.95□□□□□ -1.14
LINC01963-201ENST00000562038 NPHP3Q7Z494 1330 aa7.95□□□□□ -1.14
LINC01963-201ENST00000562038 ANKRD36BQ8N2N9 1353 aa7.95□□□□□ -1.14
LINC01963-201ENST00000562038 NFAT5O94916 1531 aa7.95□□□□□ -1.14
LINC01963-201ENST00000562038 ATF3P18847 181 aa7.95□□□□□ -1.14
LINC01963-201ENST00000562038 BCANQ96GW7 911 aa7.95□□□□□ -1.14
LINC01963-201ENST00000562038 RGL3Q3MIN7 710 aa7.94□□□□□ -1.14
LINC01963-201ENST00000562038 NPM2Q86SE8 214 aaKnown RBP7.94□□□□□ -1.14
LINC01963-201ENST00000562038 CPDO75976 1380 aa7.94□□□□□ -1.14
LINC01963-201ENST00000562038 DNAJC5GQ8N7S2 189 aa7.94□□□□□ -1.14
LINC01963-201ENST00000562038 PXDNLA1KZ92 1463 aa7.94□□□□□ -1.14
LINC01963-201ENST00000562038 USP19O94966 1318 aa7.94□□□□□ -1.14
LINC01963-201ENST00000562038 UNC5CLQ8IV45 518 aa7.94□□□□□ -1.14
LINC01963-201ENST00000562038 APLP1P51693 650 aa7.93□□□□□ -1.14
LINC01963-201ENST00000562038 PRAM1Q96QH2 718 aa7.93□□□□□ -1.14
LINC01963-201ENST00000562038 ZNF692Q9BU19 519 aaPredicted RBP7.93□□□□□ -1.14
LINC01963-201ENST00000562038 SPON1Q9HCB6 807 aa7.93□□□□□ -1.14
LINC01963-201ENST00000562038 PPIP5K1Q6PFW1 1433 aa7.93□□□□□ -1.14
LINC01963-201ENST00000562038 OVOS2A0A0J9YW53 1432 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms