RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 NUDT12Q9BQG2 462 aa5.63□□□□□ -1.51
CHD9-204ENST00000561869 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.63□□□□□ -1.51
CHD9-204ENST00000561869 PTPRNQ16849 979 aa5.62□□□□□ -1.51
CHD9-204ENST00000561869 CTC1Q2NKJ3 1217 aa5.62□□□□□ -1.51
CHD9-204ENST00000561869 CCDC24Q8N4L8 307 aa5.62□□□□□ -1.51
CHD9-204ENST00000561869 SNIP1Q8TAD8 396 aaKnown RBP5.62□□□□□ -1.51
CHD9-204ENST00000561869 EVA1BQ9NVM1 165 aa5.62□□□□□ -1.51
CHD9-204ENST00000561869 C11orf95C9JLR9 678 aaPredicted RBP5.61□□□□□ -1.51
CHD9-204ENST00000561869 PER1O15534 1290 aaPredicted RBP5.61□□□□□ -1.51
CHD9-204ENST00000561869 CCNYL3P0C7X3 344 aa5.61□□□□□ -1.51
CHD9-204ENST00000561869 SNRPBP14678 240 aaKnown RBP5.61□□□□□ -1.51
CHD9-204ENST00000561869 LCE2CQ5TA81 110 aa5.61□□□□□ -1.51
CHD9-204ENST00000561869 IL27Q8NEV9 243 aa5.61□□□□□ -1.51
CHD9-204ENST00000561869 NUTM2BA6NNL0 878 aaPredicted RBP5.6□□□□□ -1.51
CHD9-204ENST00000561869 NUTM2EB1AL46 878 aaPredicted RBP5.6□□□□□ -1.51
CHD9-204ENST00000561869 KCNH2Q12809 1159 aa5.6□□□□□ -1.51
CHD9-204ENST00000561869 RC3H1Q5TC82 1133 aaKnown RBP5.6□□□□□ -1.51
CHD9-204ENST00000561869 NUTM2DQ5VT03 806 aaPredicted RBP5.6□□□□□ -1.51
CHD9-204ENST00000561869 PPP2R2DQ66LE6 453 aa5.6□□□□□ -1.51
CHD9-204ENST00000561869 NUTM2AQ8IVF1 878 aaPredicted RBP5.6□□□□□ -1.51
CHD9-204ENST00000561869 HPS1Q92902 700 aa5.6□□□□□ -1.51
CHD9-204ENST00000561869 GOPCQ9HD26 462 aa5.6□□□□□ -1.51
CHD9-204ENST00000561869 ATP13A2Q9NQ11 1180 aa5.6□□□□□ -1.51
CHD9-204ENST00000561869 F12P00748 615 aaPredicted RBP5.59□□□□□ -1.51
CHD9-204ENST00000561869 NFX1Q12986 1120 aaKnown RBP5.58□□□□□ -1.52
CHD9-204ENST00000561869 UNC93B1Q9H1C4 597 aa5.58□□□□□ -1.52
CHD9-204ENST00000561869 WFS1O76024 890 aa5.57□□□□□ -1.52
CHD9-204ENST00000561869 WNT7BP56706 349 aa5.57□□□□□ -1.52
CHD9-204ENST00000561869 SH3BP2P78314 561 aa5.57□□□□□ -1.52
CHD9-204ENST00000561869 CTDSPL2Q05D32 466 aa5.57□□□□□ -1.52
CHD9-204ENST00000561869 MAP10Q9P2G4 905 aa5.57□□□□□ -1.52
CHD9-204ENST00000561869 SIAH2O43255 324 aa5.56□□□□□ -1.52
CHD9-204ENST00000561869 ALDH1A1P00352 501 aa5.55□□□□□ -1.52
CHD9-204ENST00000561869 CTHP32929 405 aa5.55□□□□□ -1.52
CHD9-204ENST00000561869 HELBQ8NG08 1087 aaPredicted RBP5.55□□□□□ -1.52
CHD9-204ENST00000561869 LRRN4Q8WUT4 740 aa5.55□□□□□ -1.52
CHD9-204ENST00000561869 BAP1Q92560 729 aa5.55□□□□□ -1.52
CHD9-204ENST00000561869 TSC1Q92574 1164 aa5.55□□□□□ -1.52
CHD9-204ENST00000561869 TRIM47Q96LD4 638 aa5.55□□□□□ -1.52
CHD9-204ENST00000561869 RFC5P40937 340 aa5.54□□□□□ -1.52
CHD9-204ENST00000561869 PCMTD1Q96MG8 357 aaPredicted RBP5.54□□□□□ -1.52
CHD9-204ENST00000561869 LINC01559Q495D7 138 aa5.53□□□□□ -1.52
CHD9-204ENST00000561869 ZNF511Q8NB15 262 aa5.53□□□□□ -1.52
CHD9-204ENST00000561869 BMP1P13497 986 aa5.52□□□□□ -1.53
CHD9-204ENST00000561869 TRIM46Q7Z4K8 759 aa5.52□□□□□ -1.53
CHD9-204ENST00000561869 FOXJ1Q92949 421 aa5.52□□□□□ -1.53
CHD9-204ENST00000561869 TERTO14746 1132 aaKnown RBP5.51□□□□□ -1.53
CHD9-204ENST00000561869 WIPF1O43516 503 aa5.51□□□□□ -1.53
CHD9-204ENST00000561869 AP1G2O75843 785 aa5.51□□□□□ -1.53
CHD9-204ENST00000561869 C4orf48Q5BLP8 95 aa5.51□□□□□ -1.53
CHD9-204ENST00000561869 EHBP1Q8NDI1 1231 aa5.51□□□□□ -1.53
CHD9-204ENST00000561869 SENP2Q9HC62 589 aa5.51□□□□□ -1.53
CHD9-204ENST00000561869 HMX1Q9NP08 348 aaPredicted RBP5.51□□□□□ -1.53
CHD9-204ENST00000561869 ATP1B4Q9UN42 357 aaPredicted RBP5.51□□□□□ -1.53
CHD9-204ENST00000561869 USP17L8P0C7I0 530 aa5.5□□□□□ -1.53
CHD9-204ENST00000561869 EPS8L1Q8TE68 723 aa5.5□□□□□ -1.53
CHD9-204ENST00000561869 TLL2Q9Y6L7 1015 aa5.5□□□□□ -1.53
CHD9-204ENST00000561869 VARSP26640 1264 aaKnown RBP5.49□□□□□ -1.53
CHD9-204ENST00000561869 NR6A1Q15406 480 aa5.49□□□□□ -1.53
CHD9-204ENST00000561869 TMEM259Q4ZIN3 620 aa5.49□□□□□ -1.53
CHD9-204ENST00000561869 SH3RF1Q7Z6J0 888 aa5.49□□□□□ -1.53
CHD9-204ENST00000561869 TRIM34Q9BYJ4 488 aa5.49□□□□□ -1.53
CHD9-204ENST00000561869 CAPN5O15484 640 aaPredicted RBP5.48□□□□□ -1.53
CHD9-204ENST00000561869 SH3BP5LQ7L8J4 393 aa5.48□□□□□ -1.53
CHD9-204ENST00000561869 MPNDQ8N594 471 aa5.48□□□□□ -1.53
CHD9-204ENST00000561869 ARMC2Q8NEN0 867 aa5.48□□□□□ -1.53
CHD9-204ENST00000561869 KIFC2Q96AC6 838 aa5.48□□□□□ -1.53
CHD9-204ENST00000561869 C1QTNF2Q9BXJ5 285 aa5.48□□□□□ -1.53
CHD9-204ENST00000561869 GPKOWQ92917 476 aaPredicted RBP eCLIP5.47□□□□□ -1.53
CHD9-204ENST00000561869 GJD4Q96KN9 370 aaPredicted RBP5.47□□□□□ -1.53
CHD9-204ENST00000561869 CDK15Q96Q40 435 aa5.47□□□□□ -1.53
CHD9-204ENST00000561869 OCSTAMPQ9BR26 566 aa5.47□□□□□ -1.53
CHD9-204ENST00000561869 FKBPLQ9UIM3 349 aa5.47□□□□□ -1.53
CHD9-204ENST00000561869 WASF2Q9Y6W5 498 aa5.47□□□□□ -1.53
CHD9-204ENST00000561869 NBPF14Q5TI25 921 aa5.46□□□□□ -1.54
CHD9-204ENST00000561869 PDXDC2PQ6P474 469 aa5.46□□□□□ -1.54
CHD9-204ENST00000561869 BPHLQ86WA6 291 aaPredicted RBP5.46□□□□□ -1.54
CHD9-204ENST00000561869 BANK1Q8NDB2 785 aa5.46□□□□□ -1.54
CHD9-204ENST00000561869 VEGFBP49765 207 aa5.45□□□□□ -1.54
CHD9-204ENST00000561869 FAM174AQ8TBP5 190 aa5.45□□□□□ -1.54
CHD9-204ENST00000561869 STK17AQ9UEE5 414 aa5.45□□□□□ -1.54
CHD9-204ENST00000561869 ZC3H4Q9UPT8 1303 aaKnown RBP5.45□□□□□ -1.54
CHD9-204ENST00000561869 GPR37L1O60883 481 aa5.44□□□□□ -1.54
CHD9-204ENST00000561869 TIMP2P16035 220 aa5.44□□□□□ -1.54
CHD9-204ENST00000561869 LORP23490 312 aaPredicted RBP5.44□□□□□ -1.54
CHD9-204ENST00000561869 GMPRP36959 345 aa5.44□□□□□ -1.54
CHD9-204ENST00000561869 GRM5P41594 1212 aa5.44□□□□□ -1.54
CHD9-204ENST00000561869 INSM1Q01101 510 aaPredicted RBP5.44□□□□□ -1.54
CHD9-204ENST00000561869 NNTQ13423 1086 aa5.44□□□□□ -1.54
CHD9-204ENST00000561869 TRMT44Q8IYL2 757 aaKnown RBP5.44□□□□□ -1.54
CHD9-204ENST00000561869 MTMR14Q8NCE2 650 aa5.44□□□□□ -1.54
CHD9-204ENST00000561869 ZFP42Q96MM3 310 aa5.44□□□□□ -1.54
CHD9-204ENST00000561869 SNRKQ9NRH2 765 aa5.44□□□□□ -1.54
CHD9-204ENST00000561869 NXF1Q9UBU9 619 aaKnown RBP5.44□□□□□ -1.54
CHD9-204ENST00000561869 SOCS7O14512 581 aa5.43□□□□□ -1.54
CHD9-204ENST00000561869 AGERQ15109 404 aa5.43□□□□□ -1.54
CHD9-204ENST00000561869 ERFEQ4G0M1 354 aa5.43□□□□□ -1.54
CHD9-204ENST00000561869 KLF16Q9BXK1 252 aaPredicted RBP5.43□□□□□ -1.54
CHD9-204ENST00000561869 ERBB4Q15303 1308 aa5.43□□□□□ -1.54
CHD9-204ENST00000561869 SOBPA7XYQ1 873 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms