RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 ABCA3Q99758 1704 aa23.29■■□□□ 1.32
RPL28-211ENST00000560881 CPSF1Q10570 1443 aaKnown RBP23.29■■□□□ 1.32
RPL28-211ENST00000560881 PUS7Q96PZ0 661 aaKnown RBP23.28■■□□□ 1.32
RPL28-211ENST00000560881 C11orf95C9JLR9 678 aaPredicted RBP23.27■■□□□ 1.32
RPL28-211ENST00000560881 POLR3GLQ9BT43 218 aa23.27■■□□□ 1.32
RPL28-211ENST00000560881 A0A1W2PP64 1363 aa23.26■■□□□ 1.31
RPL28-211ENST00000560881 CABLES1Q8TDN4 633 aa23.25■■□□□ 1.31
RPL28-211ENST00000560881 CRYBG1Q9Y4K1 1723 aa23.25■■□□□ 1.31
RPL28-211ENST00000560881 ARHGEF10O15013 1369 aa23.25■■□□□ 1.31
RPL28-211ENST00000560881 KTN1Q86UP2 1357 aaKnown RBP23.25■■□□□ 1.31
RPL28-211ENST00000560881 NUTM2GQ5VZR2 741 aa23.25■■□□□ 1.31
RPL28-211ENST00000560881 SSH2Q76I76 1423 aa23.24■■□□□ 1.31
RPL28-211ENST00000560881 PIK3C2AO00443 1686 aa23.24■■□□□ 1.31
RPL28-211ENST00000560881 CDCA8Q53HL2 280 aa23.24■■□□□ 1.31
RPL28-211ENST00000560881 NINLQ9Y2I6 1382 aa23.22■■□□□ 1.31
RPL28-211ENST00000560881 ADAMTS2O95450 1211 aa23.22■■□□□ 1.31
RPL28-211ENST00000560881 PHRF1Q9P1Y6 1649 aaKnown RBP23.21■■□□□ 1.31
RPL28-211ENST00000560881 ZNF692Q9BU19 519 aaPredicted RBP23.21■■□□□ 1.31
RPL28-211ENST00000560881 MARF1Q9Y4F3 1742 aaKnown RBP23.21■■□□□ 1.31
RPL28-211ENST00000560881 MEX3CQ5U5Q3 659 aaKnown RBP23.2■■□□□ 1.3
RPL28-211ENST00000560881 HDGFL2Q7Z4V5 671 aaPredicted RBP23.2■■□□□ 1.3
RPL28-211ENST00000560881 ABTB2Q8N961 1025 aa23.2■■□□□ 1.3
RPL28-211ENST00000560881 TTC21BQ7Z4L5 1316 aa23.19■■□□□ 1.3
RPL28-211ENST00000560881 ANKRD36BQ8N2N9 1353 aa23.19■■□□□ 1.3
RPL28-211ENST00000560881 TERF2IPQ9NYB0 399 aa23.19■■□□□ 1.3
RPL28-211ENST00000560881 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.18■■□□□ 1.3
RPL28-211ENST00000560881 BRD4O60885 1362 aaPredicted RBP23.17■■□□□ 1.3
RPL28-211ENST00000560881 EDC4Q6P2E9 1401 aaKnown RBP23.16■■□□□ 1.3
RPL28-211ENST00000560881 KIF7Q2M1P5 1343 aa23.16■■□□□ 1.3
RPL28-211ENST00000560881 HAP1P54257 671 aaPredicted RBP23.16■■□□□ 1.3
RPL28-211ENST00000560881 C8orf37Q96NL8 207 aa23.16■■□□□ 1.3
RPL28-211ENST00000560881 ZEB1P37275 1124 aaPredicted RBP23.14■■□□□ 1.29
RPL28-211ENST00000560881 PHF23Q9BUL5 403 aaPredicted RBP23.14■■□□□ 1.29
RPL28-211ENST00000560881 ZRANB1Q9UGI0 708 aa23.14■■□□□ 1.29
RPL28-211ENST00000560881 NME9Q86XW9 330 aa23.13■■□□□ 1.29
RPL28-211ENST00000560881 TTC21AQ8NDW8 1320 aa23.13■■□□□ 1.29
RPL28-211ENST00000560881 NLRP6P59044 892 aa23.13■■□□□ 1.29
RPL28-211ENST00000560881 RGS17Q9UGC6 210 aaPredicted RBP23.12■■□□□ 1.29
RPL28-211ENST00000560881 USP19O94966 1318 aa23.11■■□□□ 1.29
RPL28-211ENST00000560881 CARD14Q9BXL6 1004 aa23.1■■□□□ 1.29
RPL28-211ENST00000560881 SLIT3O75094 1523 aa23.1■■□□□ 1.29
RPL28-211ENST00000560881 NSD3Q9BZ95 1437 aa23.1■■□□□ 1.29
RPL28-211ENST00000560881 WASHC2AQ641Q2 1341 aa23.09■■□□□ 1.29
RPL28-211ENST00000560881 NLRP13Q86W25 1043 aa23.09■■□□□ 1.29
RPL28-211ENST00000560881 KIF20BQ96Q89 1820 aa23.09■■□□□ 1.29
RPL28-211ENST00000560881 PLCH1Q4KWH8 1693 aa23.09■■□□□ 1.29
RPL28-211ENST00000560881 USP54Q70EL1 1684 aa23.09■■□□□ 1.29
RPL28-211ENST00000560881 CCDC7Q96M83 1385 aa23.09■■□□□ 1.29
RPL28-211ENST00000560881 AFF2P51816 1311 aa23.09■■□□□ 1.29
RPL28-211ENST00000560881 NGLY1Q96IV0 654 aa23.08■■□□□ 1.29
RPL28-211ENST00000560881 SOX12O15370 315 aa23.06■■□□□ 1.28
RPL28-211ENST00000560881 ZC3H6P61129 1189 aaKnown RBP23.06■■□□□ 1.28
RPL28-211ENST00000560881 KIAA0232Q92628 1395 aa23.05■■□□□ 1.28
RPL28-211ENST00000560881 GCP02774 474 aa23.05■■□□□ 1.28
RPL28-211ENST00000560881 PANK3Q9H999 370 aa23.05■■□□□ 1.28
RPL28-211ENST00000560881 OVOS2A0A0J9YW53 1432 aa23.05■■□□□ 1.28
RPL28-211ENST00000560881 OVOS2Q6IE36 1432 aa23.05■■□□□ 1.28
RPL28-211ENST00000560881 FAM83GA6ND36 823 aa23.04■■□□□ 1.28
RPL28-211ENST00000560881 USP31Q70CQ4 1352 aa23.04■■□□□ 1.28
RPL28-211ENST00000560881 COL14A1Q05707 1796 aaKnown RBP23.04■■□□□ 1.28
RPL28-211ENST00000560881 CHRNA2Q15822 529 aa23.03■■□□□ 1.28
RPL28-211ENST00000560881 NFAT5O94916 1531 aa23.03■■□□□ 1.28
RPL28-211ENST00000560881 SLIT2O94813 1529 aa23.02■■□□□ 1.28
RPL28-211ENST00000560881 POTEAQ6S8J7 498 aa23.02■■□□□ 1.28
RPL28-211ENST00000560881 GGNBP2Q9H3C7 697 aa23.02■■□□□ 1.28
RPL28-211ENST00000560881 PRDM11Q9NQV5 511 aa23.02■■□□□ 1.28
RPL28-211ENST00000560881 FYB1O15117 783 aa23.01■■□□□ 1.27
RPL28-211ENST00000560881 FNBP4Q8N3X1 1017 aaPredicted RBP23.01■■□□□ 1.27
RPL28-211ENST00000560881 BCL9LQ86UU0 1499 aa23.01■■□□□ 1.27
RPL28-211ENST00000560881 NWD2Q9ULI1 1742 aa23.01■■□□□ 1.27
RPL28-211ENST00000560881 ZBTB7CA1YPR0 619 aa23■■□□□ 1.27
RPL28-211ENST00000560881 USP21Q9UK80 565 aa23■■□□□ 1.27
RPL28-211ENST00000560881 NRAPQ86VF7 1730 aa23■■□□□ 1.27
RPL28-211ENST00000560881 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.99■■□□□ 1.27
RPL28-211ENST00000560881 LTN1O94822 1766 aa22.99■■□□□ 1.27
RPL28-211ENST00000560881 LMO7Q8WWI1 1683 aa22.98■■□□□ 1.27
RPL28-211ENST00000560881 CPDO75976 1380 aa22.97■■□□□ 1.27
RPL28-211ENST00000560881 ZNF772Q68DY9 489 aaPredicted RBP22.97■■□□□ 1.27
RPL28-211ENST00000560881 COG3Q96JB2 828 aa22.97■■□□□ 1.27
RPL28-211ENST00000560881 BTG4Q9NY30 223 aa22.97■■□□□ 1.27
RPL28-211ENST00000560881 RGPD5Q99666 1765 aa22.96■■□□□ 1.27
RPL28-211ENST00000560881 COL18A1P39060 1754 aa22.96■■□□□ 1.27
RPL28-211ENST00000560881 FBLN1P23142 703 aa22.96■■□□□ 1.27
RPL28-211ENST00000560881 KCNH5Q8NCM2 988 aa22.96■■□□□ 1.27
RPL28-211ENST00000560881 ANKRD26Q9UPS8 1709 aa22.96■■□□□ 1.27
RPL28-211ENST00000560881 CAMTA1Q9Y6Y1 1673 aa22.94■■□□□ 1.26
RPL28-211ENST00000560881 CGNL1Q0VF96 1302 aa22.94■■□□□ 1.26
RPL28-211ENST00000560881 ARHGEF25Q86VW2 580 aa22.93■■□□□ 1.26
RPL28-211ENST00000560881 UNC5CLQ8IV45 518 aa22.93■■□□□ 1.26
RPL28-211ENST00000560881 QTRT2Q9H974 415 aaKnown RBP22.93■■□□□ 1.26
RPL28-211ENST00000560881 ATRNO75882 1429 aa22.92■■□□□ 1.26
RPL28-211ENST00000560881 ILDR2Q71H61 639 aa22.92■■□□□ 1.26
RPL28-211ENST00000560881 TRPC5Q9UL62 973 aaPredicted RBP22.9■■□□□ 1.26
RPL28-211ENST00000560881 STRN4Q9NRL3 753 aa22.89■■□□□ 1.25
RPL28-211ENST00000560881 AXIN2Q9Y2T1 843 aa22.89■■□□□ 1.25
RPL28-211ENST00000560881 KNSTRNQ9Y448 316 aa22.89■■□□□ 1.25
RPL28-211ENST00000560881 AATKQ6ZMQ8 1374 aa22.88■■□□□ 1.25
RPL28-211ENST00000560881 PER1O15534 1290 aaPredicted RBP22.88■■□□□ 1.25
RPL28-211ENST00000560881 GLI3P10071 1580 aa22.88■■□□□ 1.25
RPL28-211ENST00000560881 COL5A2P05997 1499 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms