RNA–Protein interactions for RNA: ENST00000560789.5

PDE8A-213, Transcript of phosphodiesterase 8A, humanhuman

TSL 2

Gene PDE8A, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-213ENST00000560789 CHD1LQ86WJ1 897 aa7.09□□□□□ -1.27
PDE8A-213ENST00000560789 NOB1Q9ULX3 412 aaKnown RBP7.09□□□□□ -1.27
PDE8A-213ENST00000560789 IPO7O95373 1038 aaKnown RBP7.09□□□□□ -1.28
PDE8A-213ENST00000560789 TSPY26PQ9H489 355 aa7.09□□□□□ -1.28
PDE8A-213ENST00000560789 SCAF11Q99590 1463 aaKnown RBP7.08□□□□□ -1.28
PDE8A-213ENST00000560789 FRAT2O75474 233 aaPredicted RBP7.08□□□□□ -1.28
PDE8A-213ENST00000560789 BCAR3O75815 825 aa7.08□□□□□ -1.28
PDE8A-213ENST00000560789 EIF2S2P20042 333 aaKnown RBP7.08□□□□□ -1.28
PDE8A-213ENST00000560789 ZNF330Q9Y3S2 320 aaPredicted RBP7.08□□□□□ -1.28
PDE8A-213ENST00000560789 LRPPRCP42704 1394 aaKnown RBP7.08□□□□□ -1.28
PDE8A-213ENST00000560789 HMOX1P09601 288 aa7.08□□□□□ -1.28
PDE8A-213ENST00000560789 SAFBQ15424 915 aaKnown RBP eCLIP7.08□□□□□ -1.28
PDE8A-213ENST00000560789 NOC3LQ8WTT2 800 aaKnown RBP7.08□□□□□ -1.28
PDE8A-213ENST00000560789 GRIN2AQ12879 1464 aa7.08□□□□□ -1.28
PDE8A-213ENST00000560789 RALGAPBQ86X10 1494 aa7.08□□□□□ -1.28
PDE8A-213ENST00000560789 VPS37CA5D8V6 355 aaPredicted RBP7.08□□□□□ -1.28
PDE8A-213ENST00000560789 MCM4P33991 863 aa7.08□□□□□ -1.28
PDE8A-213ENST00000560789 CCDC184Q52MB2 194 aa7.08□□□□□ -1.28
PDE8A-213ENST00000560789 TMEM132EQ6IEE7 984 aa7.08□□□□□ -1.28
PDE8A-213ENST00000560789 AMOTL1Q8IY63 956 aa7.08□□□□□ -1.28
PDE8A-213ENST00000560789 UGGT2Q9NYU1 1516 aa7.08□□□□□ -1.28
PDE8A-213ENST00000560789 A0A0U1RQG5 324 aaPredicted RBP7.07□□□□□ -1.28
PDE8A-213ENST00000560789 DHX16O60231 1041 aaKnown RBP7.07□□□□□ -1.28
PDE8A-213ENST00000560789 PLEKHO1Q53GL0 409 aaPredicted RBP7.07□□□□□ -1.28
PDE8A-213ENST00000560789 ZSCAN31Q96LW9 406 aaPredicted RBP7.07□□□□□ -1.28
PDE8A-213ENST00000560789 SLC12A5Q9H2X9 1139 aa7.07□□□□□ -1.28
PDE8A-213ENST00000560789 ACBD3Q9H3P7 528 aa7.07□□□□□ -1.28
PDE8A-213ENST00000560789 TOMM22Q9NS69 142 aa7.07□□□□□ -1.28
PDE8A-213ENST00000560789 MAPKBP1O60336 1514 aa7.07□□□□□ -1.28
PDE8A-213ENST00000560789 TCOF1Q13428 1488 aaKnown RBP7.07□□□□□ -1.28
PDE8A-213ENST00000560789 PSME1Q06323 249 aa7.07□□□□□ -1.28
PDE8A-213ENST00000560789 RAPGEF4Q8WZA2 1011 aa7.07□□□□□ -1.28
PDE8A-213ENST00000560789 IL16Q14005 1332 aa7.07□□□□□ -1.28
PDE8A-213ENST00000560789 NEK4P51957 841 aa7.07□□□□□ -1.28
PDE8A-213ENST00000560789 FAM135AQ9P2D6 1515 aa7.07□□□□□ -1.28
PDE8A-213ENST00000560789 NSD3Q9BZ95 1437 aa7.07□□□□□ -1.28
PDE8A-213ENST00000560789 NFE2L2Q16236 605 aa7.07□□□□□ -1.28
PDE8A-213ENST00000560789 ZNF396Q96N95 335 aaPredicted RBP7.07□□□□□ -1.28
PDE8A-213ENST00000560789 PRAM1Q96QH2 718 aa7.07□□□□□ -1.28
PDE8A-213ENST00000560789 LRRCC1Q9C099 1032 aa7.07□□□□□ -1.28
PDE8A-213ENST00000560789 PLEKHH1Q9ULM0 1364 aa7.07□□□□□ -1.28
PDE8A-213ENST00000560789 RTEL1-TNFRSF6BF6WH68 1400 aa7.06□□□□□ -1.28
PDE8A-213ENST00000560789 RALYLQ86SE5 291 aaKnown RBP7.06□□□□□ -1.28
PDE8A-213ENST00000560789 ERICH2A1L162 156 aa7.06□□□□□ -1.28
PDE8A-213ENST00000560789 CAVIN1Q6NZI2 390 aaKnown RBP7.06□□□□□ -1.28
PDE8A-213ENST00000560789 CDK19Q9BWU1 502 aa7.06□□□□□ -1.28
PDE8A-213ENST00000560789 GRPEL1Q9HAV7 217 aa7.06□□□□□ -1.28
PDE8A-213ENST00000560789 IFT57Q9NWB7 429 aa7.06□□□□□ -1.28
PDE8A-213ENST00000560789 NUTM2FA1L443 756 aa7.06□□□□□ -1.28
PDE8A-213ENST00000560789 SURF6O75683 361 aaKnown RBP7.06□□□□□ -1.28
PDE8A-213ENST00000560789 TMPOP42166 694 aaKnown RBP7.06□□□□□ -1.28
PDE8A-213ENST00000560789 ARHGEF11O15085 1522 aa7.05□□□□□ -1.28
PDE8A-213ENST00000560789 INSRP06213 1382 aa7.05□□□□□ -1.28
PDE8A-213ENST00000560789 XBP1P17861 261 aa7.05□□□□□ -1.28
PDE8A-213ENST00000560789 RIC3Q7Z5B4 369 aa7.05□□□□□ -1.28
PDE8A-213ENST00000560789 PUS7Q96PZ0 661 aaKnown RBP7.05□□□□□ -1.28
PDE8A-213ENST00000560789 NOL10Q9BSC4 688 aaKnown RBP7.05□□□□□ -1.28
PDE8A-213ENST00000560789 PIP4K2AP48426 406 aaPredicted RBP7.05□□□□□ -1.28
PDE8A-213ENST00000560789 RARSP54136 660 aaKnown RBP7.05□□□□□ -1.28
PDE8A-213ENST00000560789 OLFM4Q6UX06 510 aa7.05□□□□□ -1.28
PDE8A-213ENST00000560789 ITSN2Q9NZM3 1697 aa7.05□□□□□ -1.28
PDE8A-213ENST00000560789 GTF2E1P29083 439 aaPredicted RBP7.05□□□□□ -1.28
PDE8A-213ENST00000560789 NLRP6P59044 892 aa7.05□□□□□ -1.28
PDE8A-213ENST00000560789 SETQ01105 290 aaPredicted RBP7.05□□□□□ -1.28
PDE8A-213ENST00000560789 HOMER1Q86YM7 354 aa7.05□□□□□ -1.28
PDE8A-213ENST00000560789 CYP46A1Q9Y6A2 500 aa7.05□□□□□ -1.28
PDE8A-213ENST00000560789 CCDC192P0DO97 292 aa7.04□□□□□ -1.28
PDE8A-213ENST00000560789 JMYQ8N9B5 988 aa7.04□□□□□ -1.28
PDE8A-213ENST00000560789 CEP89Q96ST8 783 aa7.04□□□□□ -1.28
PDE8A-213ENST00000560789 PPP6R1Q9UPN7 881 aa7.04□□□□□ -1.28
PDE8A-213ENST00000560789 ARHGEF12Q9NZN5 1544 aa7.04□□□□□ -1.28
PDE8A-213ENST00000560789 C11orf95C9JLR9 678 aaPredicted RBP7.04□□□□□ -1.28
PDE8A-213ENST00000560789 MARCH6O60337 910 aa7.04□□□□□ -1.28
PDE8A-213ENST00000560789 KINO60870 393 aaKnown RBP7.04□□□□□ -1.28
PDE8A-213ENST00000560789 KRT32Q14532 448 aa7.04□□□□□ -1.28
PDE8A-213ENST00000560789 VSIG10Q8N0Z9 540 aa7.04□□□□□ -1.28
PDE8A-213ENST00000560789 FSD1Q9BTV5 496 aa7.04□□□□□ -1.28
PDE8A-213ENST00000560789 FAM13BQ9NYF5 915 aa7.04□□□□□ -1.28
PDE8A-213ENST00000560789 PRPF40AO75400 957 aaKnown RBP7.04□□□□□ -1.28
PDE8A-213ENST00000560789 FAM69CQ0P6D2 419 aa7.04□□□□□ -1.28
PDE8A-213ENST00000560789 BRMS1Q9HCU9 246 aa7.04□□□□□ -1.28
PDE8A-213ENST00000560789 CFAP43Q8NDM7 1665 aa7.04□□□□□ -1.28
PDE8A-213ENST00000560789 RAB11FIP3O75154 756 aa7.04□□□□□ -1.28
PDE8A-213ENST00000560789 MNS1Q8NEH6 495 aa7.04□□□□□ -1.28
PDE8A-213ENST00000560789 TSR2Q969E8 191 aaKnown RBP7.04□□□□□ -1.28
PDE8A-213ENST00000560789 SLC4A2P04920 1241 aa7.03□□□□□ -1.28
PDE8A-213ENST00000560789 KRT85P78386 507 aa7.03□□□□□ -1.28
PDE8A-213ENST00000560789 ERCC4Q92889 916 aaPredicted RBP7.03□□□□□ -1.28
PDE8A-213ENST00000560789 EIF2AK4Q9P2K8 1649 aaKnown RBP7.03□□□□□ -1.28
PDE8A-213ENST00000560789 SART3Q15020 963 aaKnown RBP7.03□□□□□ -1.28
PDE8A-213ENST00000560789 DUSP27Q5VZP5 1158 aa7.03□□□□□ -1.28
PDE8A-213ENST00000560789 CABP1Q9NZU7 370 aa7.03□□□□□ -1.28
PDE8A-213ENST00000560789 ZNF771Q7L3S4 317 aaPredicted RBP7.03□□□□□ -1.28
PDE8A-213ENST00000560789 SDF4Q9BRK5 362 aa7.03□□□□□ -1.28
PDE8A-213ENST00000560789 GPATCH8Q9UKJ3 1502 aaKnown RBP7.03□□□□□ -1.28
PDE8A-213ENST00000560789 FOXD4L6Q3SYB3 417 aaPredicted RBP7.03□□□□□ -1.28
PDE8A-213ENST00000560789 HDGFL1Q5TGJ6 251 aa7.03□□□□□ -1.28
PDE8A-213ENST00000560789 FOXD4L3Q6VB84 417 aaPredicted RBP7.03□□□□□ -1.28
PDE8A-213ENST00000560789 NFXL1Q6ZNB6 911 aa7.03□□□□□ -1.28
PDE8A-213ENST00000560789 ESPNB1AK53 854 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms