RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 ZBED9Q6R2W3 1325 aa15.83■□□□□ 0.12
AC087878.1-201ENST00000560709 AATKQ6ZMQ8 1374 aa15.83■□□□□ 0.12
AC087878.1-201ENST00000560709 SSH2Q76I76 1423 aa15.83■□□□□ 0.12
AC087878.1-201ENST00000560709 COG3Q96JB2 828 aa15.82■□□□□ 0.12
AC087878.1-201ENST00000560709 TTC21BQ7Z4L5 1316 aa15.82■□□□□ 0.12
AC087878.1-201ENST00000560709 TMEM94Q12767 1356 aa15.82■□□□□ 0.12
AC087878.1-201ENST00000560709 BLMP54132 1417 aaPredicted RBP15.82■□□□□ 0.12
AC087878.1-201ENST00000560709 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.81■□□□□ 0.12
AC087878.1-201ENST00000560709 PHF8Q9UPP1 1060 aa15.81■□□□□ 0.12
AC087878.1-201ENST00000560709 LRRC7Q96NW7 1537 aa15.8■□□□□ 0.12
AC087878.1-201ENST00000560709 MSH6P52701 1360 aa15.8■□□□□ 0.12
AC087878.1-201ENST00000560709 NUTM2FA1L443 756 aa15.8■□□□□ 0.12
AC087878.1-201ENST00000560709 CADPS2Q86UW7 1296 aa15.8■□□□□ 0.12
AC087878.1-201ENST00000560709 KIF1AQ12756 1690 aa15.79■□□□□ 0.12
AC087878.1-201ENST00000560709 USP31Q70CQ4 1352 aa15.79■□□□□ 0.12
AC087878.1-201ENST00000560709 ATF3P18847 181 aa15.79■□□□□ 0.12
AC087878.1-201ENST00000560709 OVOS2A0A0J9YW53 1432 aa15.78■□□□□ 0.12
AC087878.1-201ENST00000560709 OVOS2Q6IE36 1432 aa15.78■□□□□ 0.12
AC087878.1-201ENST00000560709 SMG6Q86US8 1419 aaKnown RBP15.78■□□□□ 0.12
AC087878.1-201ENST00000560709 MTHFSP49914 203 aa15.78■□□□□ 0.12
AC087878.1-201ENST00000560709 NGEFQ8N5V2 710 aa15.78■□□□□ 0.12
AC087878.1-201ENST00000560709 NME9Q86XW9 330 aa15.77■□□□□ 0.12
AC087878.1-201ENST00000560709 PMFBP1Q8TBY8 1022 aa15.77■□□□□ 0.12
AC087878.1-201ENST00000560709 NUDCQ9Y266 331 aa15.77■□□□□ 0.12
AC087878.1-201ENST00000560709 C1orf167Q5SNV9 1468 aa15.77■□□□□ 0.11
AC087878.1-201ENST00000560709 PNPLA6Q8IY17 1366 aa15.76■□□□□ 0.11
AC087878.1-201ENST00000560709 STRCP1A6NGW2 1772 aa15.76■□□□□ 0.11
AC087878.1-201ENST00000560709 TNNT2P45379 298 aaPredicted RBP15.75■□□□□ 0.11
AC087878.1-201ENST00000560709 ESCO1Q5FWF5 840 aa15.75■□□□□ 0.11
AC087878.1-201ENST00000560709 CDK12Q9NYV4 1490 aaPredicted RBP15.75■□□□□ 0.11
AC087878.1-201ENST00000560709 USP54Q70EL1 1684 aa15.75■□□□□ 0.11
AC087878.1-201ENST00000560709 MST1RQ04912 1400 aa15.75■□□□□ 0.11
AC087878.1-201ENST00000560709 RGPD8O14715 1765 aaPredicted RBP15.74■□□□□ 0.11
AC087878.1-201ENST00000560709 ADAMTS8Q9UP79 889 aa15.73■□□□□ 0.11
AC087878.1-201ENST00000560709 PDE3BQ13370 1112 aa15.72■□□□□ 0.11
AC087878.1-201ENST00000560709 RBM33Q96EV2 1170 aaKnown RBP15.72■□□□□ 0.11
AC087878.1-201ENST00000560709 PNNQ9H307 717 aaKnown RBP15.72■□□□□ 0.11
AC087878.1-201ENST00000560709 KIF24Q5T7B8 1368 aa15.72■□□□□ 0.11
AC087878.1-201ENST00000560709 COL3A1P02461 1466 aaPredicted RBP15.71■□□□□ 0.11
AC087878.1-201ENST00000560709 PSME1Q06323 249 aa15.71■□□□□ 0.11
AC087878.1-201ENST00000560709 NCBP3Q53F19 620 aaKnown RBP15.71■□□□□ 0.11
AC087878.1-201ENST00000560709 POLKQ9UBT6 870 aa15.71■□□□□ 0.11
AC087878.1-201ENST00000560709 ZNF335Q9H4Z2 1342 aaPredicted RBP15.7■□□□□ 0.1
AC087878.1-201ENST00000560709 DIAPH1O60610 1272 aaKnown RBP15.7■□□□□ 0.1
AC087878.1-201ENST00000560709 SHPRHQ149N8 1683 aa15.7■□□□□ 0.1
AC087878.1-201ENST00000560709 PIK3C2AO00443 1686 aa15.69■□□□□ 0.1
AC087878.1-201ENST00000560709 NPHP3Q7Z494 1330 aa15.68■□□□□ 0.1
AC087878.1-201ENST00000560709 NLRP6P59044 892 aa15.67■□□□□ 0.1
AC087878.1-201ENST00000560709 ABTB2Q8N961 1025 aa15.67■□□□□ 0.1
AC087878.1-201ENST00000560709 ORAI2Q96SN7 254 aa15.67■□□□□ 0.1
AC087878.1-201ENST00000560709 GTF3C3Q9Y5Q9 886 aa15.67■□□□□ 0.1
AC087878.1-201ENST00000560709 SBNO1A3KN83 1393 aa15.66■□□□□ 0.1
AC087878.1-201ENST00000560709 PAK3O75914 559 aaPredicted RBP15.66■□□□□ 0.1
AC087878.1-201ENST00000560709 KCNH5Q8NCM2 988 aa15.66■□□□□ 0.1
AC087878.1-201ENST00000560709 RUNDC1Q96C34 613 aa15.66■□□□□ 0.1
AC087878.1-201ENST00000560709 RTL1A6NKG5 1358 aa15.65■□□□□ 0.1
AC087878.1-201ENST00000560709 U2AF1L5P0DN76 240 aaPredicted RBP15.65■□□□□ 0.1
AC087878.1-201ENST00000560709 U2AF1Q01081 240 aaKnown RBP eCLIP15.65■□□□□ 0.1
AC087878.1-201ENST00000560709 ZRANB1Q9UGI0 708 aa15.65■□□□□ 0.1
AC087878.1-201ENST00000560709 XIRP1Q702N8 1843 aaKnown RBP15.65■□□□□ 0.1
AC087878.1-201ENST00000560709 FLT4P35916 1363 aa15.64■□□□□ 0.09
AC087878.1-201ENST00000560709 FOXO3O43524 673 aa15.64■□□□□ 0.09
AC087878.1-201ENST00000560709 MAP2P11137 1827 aaKnown RBP15.64■□□□□ 0.09
AC087878.1-201ENST00000560709 NEFMP07197 916 aa15.63■□□□□ 0.09
AC087878.1-201ENST00000560709 KRT28Q7Z3Y7 464 aa15.63■□□□□ 0.09
AC087878.1-201ENST00000560709 EMILIN1Q9Y6C2 1016 aa15.63■□□□□ 0.09
AC087878.1-201ENST00000560709 TRPM3Q9HCF6 1732 aaPredicted RBP15.63■□□□□ 0.09
AC087878.1-201ENST00000560709 U2SURPO15042 1029 aaKnown RBP15.62■□□□□ 0.09
AC087878.1-201ENST00000560709 PPM1GO15355 546 aaPredicted RBP15.62■□□□□ 0.09
AC087878.1-201ENST00000560709 FCHSD2O94868 740 aa15.62■□□□□ 0.09
AC087878.1-201ENST00000560709 IQSEC2Q5JU85 1478 aa15.62■□□□□ 0.09
AC087878.1-201ENST00000560709 IL13P35225 146 aa15.61■□□□□ 0.09
AC087878.1-201ENST00000560709 RRS1Q15050 365 aaKnown RBP15.61■□□□□ 0.09
AC087878.1-201ENST00000560709 SLIT3O75094 1523 aa15.61■□□□□ 0.09
AC087878.1-201ENST00000560709 USP19O94966 1318 aa15.61■□□□□ 0.09
AC087878.1-201ENST00000560709 ARHGEF10O15013 1369 aa15.61■□□□□ 0.09
AC087878.1-201ENST00000560709 NEFLP07196 543 aa15.6■□□□□ 0.09
AC087878.1-201ENST00000560709 CCDC27Q2M243 656 aa15.6■□□□□ 0.09
AC087878.1-201ENST00000560709 SLAIN2Q9P270 581 aa15.6■□□□□ 0.09
AC087878.1-201ENST00000560709 MAP3K19Q56UN5 1328 aa15.6■□□□□ 0.09
AC087878.1-201ENST00000560709 MAPK8IP3Q9UPT6 1336 aa15.6■□□□□ 0.09
AC087878.1-201ENST00000560709 TNS3Q68CZ2 1445 aa15.6■□□□□ 0.09
AC087878.1-201ENST00000560709 ZNF521Q96K83 1311 aa15.59■□□□□ 0.09
AC087878.1-201ENST00000560709 MARF1Q9Y4F3 1742 aaKnown RBP15.59■□□□□ 0.09
AC087878.1-201ENST00000560709 APAF1O14727 1248 aa15.58■□□□□ 0.08
AC087878.1-201ENST00000560709 AMPHP49418 695 aa15.58■□□□□ 0.08
AC087878.1-201ENST00000560709 BRINP3Q76B58 766 aa15.58■□□□□ 0.08
AC087878.1-201ENST00000560709 CCDC146Q8IYE0 955 aa15.58■□□□□ 0.08
AC087878.1-201ENST00000560709 PXDNQ92626 1479 aa15.58■□□□□ 0.08
AC087878.1-201ENST00000560709 NFAT5O94916 1531 aa15.58■□□□□ 0.08
AC087878.1-201ENST00000560709 PHRF1Q9P1Y6 1649 aaKnown RBP15.57■□□□□ 0.08
AC087878.1-201ENST00000560709 ALS2Q96Q42 1657 aa15.57■□□□□ 0.08
AC087878.1-201ENST00000560709 LTBP4Q8N2S1 1624 aa15.57■□□□□ 0.08
AC087878.1-201ENST00000560709 GOLGA2Q08379 1002 aa15.56■□□□□ 0.08
AC087878.1-201ENST00000560709 TCP11L2Q8N4U5 519 aa15.56■□□□□ 0.08
AC087878.1-201ENST00000560709 PLEKHF1Q96S99 279 aa15.56■□□□□ 0.08
AC087878.1-201ENST00000560709 MED1Q15648 1581 aaPredicted RBP15.56■□□□□ 0.08
AC087878.1-201ENST00000560709 ABCC6O95255 1503 aa15.55■□□□□ 0.08
AC087878.1-201ENST00000560709 FBLN1P23142 703 aa15.55■□□□□ 0.08
AC087878.1-201ENST00000560709 EIF4A2Q14240 407 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms