RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 HDGFL2Q7Z4V5 671 aaPredicted RBP9.88□□□□□ -0.83
HMBOX1-214ENST00000560357 CPSF1Q10570 1443 aaKnown RBP9.88□□□□□ -0.83
HMBOX1-214ENST00000560357 ANKARQ7Z5J8 1434 aa9.88□□□□□ -0.83
HMBOX1-214ENST00000560357 NSD3Q9BZ95 1437 aa9.88□□□□□ -0.83
HMBOX1-214ENST00000560357 RGPD8O14715 1765 aaPredicted RBP9.88□□□□□ -0.83
HMBOX1-214ENST00000560357 TMEM94Q12767 1356 aa9.88□□□□□ -0.83
HMBOX1-214ENST00000560357 KTN1Q86UP2 1357 aaKnown RBP9.88□□□□□ -0.83
HMBOX1-214ENST00000560357 PITPNM1O00562 1244 aa9.87□□□□□ -0.83
HMBOX1-214ENST00000560357 C14orf37Q86TY3 774 aa9.87□□□□□ -0.83
HMBOX1-214ENST00000560357 C19orf44Q9H6X5 657 aa9.87□□□□□ -0.83
HMBOX1-214ENST00000560357 PARD3Q8TEW0 1356 aa9.87□□□□□ -0.83
HMBOX1-214ENST00000560357 XIRP1Q702N8 1843 aaKnown RBP9.86□□□□□ -0.83
HMBOX1-214ENST00000560357 ITSN1Q15811 1721 aa9.86□□□□□ -0.83
HMBOX1-214ENST00000560357 ZNF692Q9BU19 519 aaPredicted RBP9.86□□□□□ -0.83
HMBOX1-214ENST00000560357 LRRC7Q96NW7 1537 aa9.86□□□□□ -0.83
HMBOX1-214ENST00000560357 AKAP12Q02952 1782 aa9.86□□□□□ -0.83
HMBOX1-214ENST00000560357 ACEP12821 1306 aa9.85□□□□□ -0.83
HMBOX1-214ENST00000560357 SSUH2Q9Y2M2 353 aa9.85□□□□□ -0.83
HMBOX1-214ENST00000560357 MON2Q7Z3U7 1717 aa9.85□□□□□ -0.83
HMBOX1-214ENST00000560357 CGNL1Q0VF96 1302 aa9.84□□□□□ -0.83
HMBOX1-214ENST00000560357 FXR2P51116 673 aaKnown RBP eCLIP9.84□□□□□ -0.83
HMBOX1-214ENST00000560357 CCDC184Q52MB2 194 aa9.84□□□□□ -0.83
HMBOX1-214ENST00000560357 PMFBP1Q8TBY8 1022 aa9.84□□□□□ -0.83
HMBOX1-214ENST00000560357 POLR3AO14802 1390 aaPredicted RBP9.84□□□□□ -0.83
HMBOX1-214ENST00000560357 MYBBP1AQ9BQG0 1328 aaKnown RBP9.83□□□□□ -0.84
HMBOX1-214ENST00000560357 DCCP43146 1447 aa9.83□□□□□ -0.84
HMBOX1-214ENST00000560357 EDC4Q6P2E9 1401 aaKnown RBP9.83□□□□□ -0.84
HMBOX1-214ENST00000560357 FYB1O15117 783 aa9.83□□□□□ -0.84
HMBOX1-214ENST00000560357 PIP4P2Q8N4L2 257 aa9.83□□□□□ -0.84
HMBOX1-214ENST00000560357 NSD2O96028 1365 aa9.83□□□□□ -0.84
HMBOX1-214ENST00000560357 ATF3P18847 181 aa9.82□□□□□ -0.84
HMBOX1-214ENST00000560357 MORC1Q86VD1 984 aa9.82□□□□□ -0.84
HMBOX1-214ENST00000560357 NGDNQ8NEJ9 315 aaKnown RBP9.82□□□□□ -0.84
HMBOX1-214ENST00000560357 PHF8Q9UPP1 1060 aa9.82□□□□□ -0.84
HMBOX1-214ENST00000560357 MSH6P52701 1360 aa9.82□□□□□ -0.84
HMBOX1-214ENST00000560357 USP6P35125 1406 aa9.82□□□□□ -0.84
HMBOX1-214ENST00000560357 SSH2Q76I76 1423 aa9.82□□□□□ -0.84
HMBOX1-214ENST00000560357 C1orf167Q5SNV9 1468 aa9.81□□□□□ -0.84
HMBOX1-214ENST00000560357 PPP2R1AP30153 589 aa9.81□□□□□ -0.84
HMBOX1-214ENST00000560357 ESCO1Q5FWF5 840 aa9.81□□□□□ -0.84
HMBOX1-214ENST00000560357 CADPS2Q86UW7 1296 aa9.81□□□□□ -0.84
HMBOX1-214ENST00000560357 NLRP13Q86W25 1043 aa9.81□□□□□ -0.84
HMBOX1-214ENST00000560357 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.81□□□□□ -0.843e-6■□□□□ 9.3
HMBOX1-214ENST00000560357 ORAI2Q96SN7 254 aa9.81□□□□□ -0.84
HMBOX1-214ENST00000560357 GGNBP2Q9H3C7 697 aa9.81□□□□□ -0.84
HMBOX1-214ENST00000560357 MST1RQ04912 1400 aa9.81□□□□□ -0.84
HMBOX1-214ENST00000560357 TTC21BQ7Z4L5 1316 aa9.81□□□□□ -0.84
HMBOX1-214ENST00000560357 NRKQ7Z2Y5 1582 aa9.8□□□□□ -0.84
HMBOX1-214ENST00000560357 KIF20BQ96Q89 1820 aa9.8□□□□□ -0.84
HMBOX1-214ENST00000560357 BRD4O60885 1362 aaPredicted RBP9.8□□□□□ -0.84
HMBOX1-214ENST00000560357 ANKRD26Q9UPS8 1709 aa9.8□□□□□ -0.84
HMBOX1-214ENST00000560357 MRS2Q9HD23 443 aa9.8□□□□□ -0.84
HMBOX1-214ENST00000560357 LTBP4Q8N2S1 1624 aa9.8□□□□□ -0.84
HMBOX1-214ENST00000560357 NME9Q86XW9 330 aa9.79□□□□□ -0.84
HMBOX1-214ENST00000560357 ZRANB1Q9UGI0 708 aa9.78□□□□□ -0.84
HMBOX1-214ENST00000560357 TTC21AQ8NDW8 1320 aa9.78□□□□□ -0.84
HMBOX1-214ENST00000560357 KIF1AQ12756 1690 aa9.77□□□□□ -0.84
HMBOX1-214ENST00000560357 FOXO3O43524 673 aa9.77□□□□□ -0.85
HMBOX1-214ENST00000560357 TNNT2P45379 298 aaPredicted RBP9.77□□□□□ -0.85
HMBOX1-214ENST00000560357 PSME1Q06323 249 aa9.77□□□□□ -0.85
HMBOX1-214ENST00000560357 SPDYE1Q8NFV5 336 aaPredicted RBP9.77□□□□□ -0.85
HMBOX1-214ENST00000560357 PNISRQ8TF01 805 aaKnown RBP9.77□□□□□ -0.85
HMBOX1-214ENST00000560357 COG3Q96JB2 828 aa9.76□□□□□ -0.85
HMBOX1-214ENST00000560357 SLAIN2Q9P270 581 aa9.76□□□□□ -0.85
HMBOX1-214ENST00000560357 USP31Q70CQ4 1352 aa9.75□□□□□ -0.85
HMBOX1-214ENST00000560357 OVOS2A0A0J9YW53 1432 aa9.75□□□□□ -0.85
HMBOX1-214ENST00000560357 OVOS2Q6IE36 1432 aa9.75□□□□□ -0.85
HMBOX1-214ENST00000560357 KRT28Q7Z3Y7 464 aa9.75□□□□□ -0.85
HMBOX1-214ENST00000560357 PIK3C2AO00443 1686 aa9.74□□□□□ -0.85
HMBOX1-214ENST00000560357 MTHFSP49914 203 aa9.74□□□□□ -0.85
HMBOX1-214ENST00000560357 BRINP3Q76B58 766 aa9.74□□□□□ -0.85
HMBOX1-214ENST00000560357 FAM9BQ8IZU0 186 aa9.74□□□□□ -0.85
HMBOX1-214ENST00000560357 MAP2P11137 1827 aaKnown RBP9.73□□□□□ -0.85
HMBOX1-214ENST00000560357 PAK3O75914 559 aaPredicted RBP9.73□□□□□ -0.85
HMBOX1-214ENST00000560357 FBLN1P23142 703 aa9.73□□□□□ -0.85
HMBOX1-214ENST00000560357 NLRP6P59044 892 aa9.73□□□□□ -0.85
HMBOX1-214ENST00000560357 XPCQ01831 940 aaPredicted RBP9.73□□□□□ -0.85
HMBOX1-214ENST00000560357 ABTB2Q8N961 1025 aa9.73□□□□□ -0.85
HMBOX1-214ENST00000560357 DDX17Q92841 729 aaKnown RBP9.73□□□□□ -0.85
HMBOX1-214ENST00000560357 YTHDC1Q96MU7 727 aaKnown RBP9.73□□□□□ -0.85
HMBOX1-214ENST00000560357 USP54Q70EL1 1684 aa9.73□□□□□ -0.85
HMBOX1-214ENST00000560357 AATKQ6ZMQ8 1374 aa9.73□□□□□ -0.85
HMBOX1-214ENST00000560357 TRPM3Q9HCF6 1732 aaPredicted RBP9.73□□□□□ -0.85
HMBOX1-214ENST00000560357 POLKQ9UBT6 870 aa9.72□□□□□ -0.85
HMBOX1-214ENST00000560357 MARF1Q9Y4F3 1742 aaKnown RBP9.72□□□□□ -0.85
HMBOX1-214ENST00000560357 NPHP3Q7Z494 1330 aa9.72□□□□□ -0.85
HMBOX1-214ENST00000560357 NUTM2GQ5VZR2 741 aa9.71□□□□□ -0.86
HMBOX1-214ENST00000560357 SBNO1A3KN83 1393 aa9.71□□□□□ -0.86
HMBOX1-214ENST00000560357 PXDNQ92626 1479 aa9.71□□□□□ -0.86
HMBOX1-214ENST00000560357 CFAP53Q96M91 514 aa9.7□□□□□ -0.86
HMBOX1-214ENST00000560357 EMILIN1Q9Y6C2 1016 aa9.7□□□□□ -0.86
HMBOX1-214ENST00000560357 INSRP06213 1382 aa9.7□□□□□ -0.86
HMBOX1-214ENST00000560357 PNPLA6Q8IY17 1366 aa9.7□□□□□ -0.86
HMBOX1-214ENST00000560357 SMG6Q86US8 1419 aaKnown RBP9.7□□□□□ -0.86
HMBOX1-214ENST00000560357 ALS2Q96Q42 1657 aa9.7□□□□□ -0.86
HMBOX1-214ENST00000560357 COL3A1P02461 1466 aaPredicted RBP9.69□□□□□ -0.86
HMBOX1-214ENST00000560357 SOS2Q07890 1332 aaPredicted RBP9.69□□□□□ -0.86
HMBOX1-214ENST00000560357 RRS1Q15050 365 aaKnown RBP9.69□□□□□ -0.86
HMBOX1-214ENST00000560357 ADAMTS8Q9UP79 889 aa9.69□□□□□ -0.86
HMBOX1-214ENST00000560357 SHPRHQ149N8 1683 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms