RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 NUTM2FA1L443 756 aa19.28■□□□□ 0.68
ZEB1-218ENST00000560196 PROSER2Q86WR7 435 aaPredicted RBP19.28■□□□□ 0.68
ZEB1-218ENST00000560196 NME9Q86XW9 330 aa19.28■□□□□ 0.68
ZEB1-218ENST00000560196 PNPLA6Q8IY17 1366 aa19.28■□□□□ 0.68
ZEB1-218ENST00000560196 SMG6Q86US8 1419 aaKnown RBP19.27■□□□□ 0.68
ZEB1-218ENST00000560196 COG3Q96JB2 828 aa19.27■□□□□ 0.68
ZEB1-218ENST00000560196 RGPD8O14715 1765 aaPredicted RBP19.27■□□□□ 0.67
ZEB1-218ENST00000560196 STRCQ7RTU9 1775 aa19.27■□□□□ 0.67
ZEB1-218ENST00000560196 NGEFQ8N5V2 710 aa19.26■□□□□ 0.67
ZEB1-218ENST00000560196 NGDNQ8NEJ9 315 aaKnown RBP19.26■□□□□ 0.67
ZEB1-218ENST00000560196 GTF3C3Q9Y5Q9 886 aa19.26■□□□□ 0.67
ZEB1-218ENST00000560196 COL3A1P02461 1466 aaPredicted RBP19.26■□□□□ 0.67
ZEB1-218ENST00000560196 OVOS2A0A0J9YW53 1432 aa19.25■□□□□ 0.67
ZEB1-218ENST00000560196 OVOS2Q6IE36 1432 aa19.25■□□□□ 0.67
ZEB1-218ENST00000560196 USP31Q70CQ4 1352 aa19.25■□□□□ 0.67
ZEB1-218ENST00000560196 PDE3BQ13370 1112 aa19.25■□□□□ 0.67
ZEB1-218ENST00000560196 DCCP43146 1447 aa19.25■□□□□ 0.67
ZEB1-218ENST00000560196 PMFBP1Q8TBY8 1022 aa19.24■□□□□ 0.67
ZEB1-218ENST00000560196 PHF8Q9UPP1 1060 aa19.24■□□□□ 0.67
ZEB1-218ENST00000560196 C19orf44Q9H6X5 657 aa19.23■□□□□ 0.67
ZEB1-218ENST00000560196 STRCP1A6NGW2 1772 aa19.22■□□□□ 0.67
ZEB1-218ENST00000560196 C14orf37Q86TY3 774 aa19.22■□□□□ 0.67
ZEB1-218ENST00000560196 POLKQ9UBT6 870 aa19.22■□□□□ 0.67
ZEB1-218ENST00000560196 NUDCQ9Y266 331 aa19.21■□□□□ 0.67
ZEB1-218ENST00000560196 CDK12Q9NYV4 1490 aaPredicted RBP19.21■□□□□ 0.67
ZEB1-218ENST00000560196 USP54Q70EL1 1684 aa19.2■□□□□ 0.66
ZEB1-218ENST00000560196 LRRC7Q96NW7 1537 aa19.2■□□□□ 0.66
ZEB1-218ENST00000560196 TMEM94Q12767 1356 aa19.2■□□□□ 0.66
ZEB1-218ENST00000560196 RBM33Q96EV2 1170 aaKnown RBP19.2■□□□□ 0.66
ZEB1-218ENST00000560196 ZRANB1Q9UGI0 708 aa19.2■□□□□ 0.66
ZEB1-218ENST00000560196 NCBP3Q53F19 620 aaKnown RBP19.19■□□□□ 0.66
ZEB1-218ENST00000560196 C1orf167Q5SNV9 1468 aa19.17■□□□□ 0.66
ZEB1-218ENST00000560196 DIAPH1O60610 1272 aaKnown RBP19.17■□□□□ 0.66
ZEB1-218ENST00000560196 RUNDC1Q96C34 613 aa19.17■□□□□ 0.66
ZEB1-218ENST00000560196 PIK3C2AO00443 1686 aa19.16■□□□□ 0.66
ZEB1-218ENST00000560196 KIF1AQ12756 1690 aa19.16■□□□□ 0.66
ZEB1-218ENST00000560196 ZNF521Q96K83 1311 aa19.16■□□□□ 0.66
ZEB1-218ENST00000560196 MAP2P11137 1827 aaKnown RBP19.16■□□□□ 0.66
ZEB1-218ENST00000560196 ESCO1Q5FWF5 840 aa19.15■□□□□ 0.66
ZEB1-218ENST00000560196 DMRT2Q9Y5R5 561 aa19.14■□□□□ 0.65
ZEB1-218ENST00000560196 MST1RQ04912 1400 aa19.14■□□□□ 0.65
ZEB1-218ENST00000560196 IQSEC2Q5JU85 1478 aa19.14■□□□□ 0.65
ZEB1-218ENST00000560196 U2AF1L5P0DN76 240 aaPredicted RBP19.13■□□□□ 0.65
ZEB1-218ENST00000560196 ATF3P18847 181 aa19.13■□□□□ 0.65
ZEB1-218ENST00000560196 U2AF1Q01081 240 aaKnown RBP eCLIP19.13■□□□□ 0.65
ZEB1-218ENST00000560196 CADPS2Q86UW7 1296 aa19.13■□□□□ 0.65
ZEB1-218ENST00000560196 CCDC146Q8IYE0 955 aa19.13■□□□□ 0.65
ZEB1-218ENST00000560196 EMILIN1Q9Y6C2 1016 aa19.13■□□□□ 0.65
ZEB1-218ENST00000560196 APAF1O14727 1248 aa19.12■□□□□ 0.65
ZEB1-218ENST00000560196 PNNQ9H307 717 aaKnown RBP19.12■□□□□ 0.65
ZEB1-218ENST00000560196 MSH6P52701 1360 aa19.11■□□□□ 0.65
ZEB1-218ENST00000560196 KIF24Q5T7B8 1368 aa19.1■□□□□ 0.65
ZEB1-218ENST00000560196 FBLN1P23142 703 aa19.1■□□□□ 0.65
ZEB1-218ENST00000560196 IL13P35225 146 aa19.1■□□□□ 0.65
ZEB1-218ENST00000560196 PSME1Q06323 249 aa19.1■□□□□ 0.65
ZEB1-218ENST00000560196 ORAI2Q96SN7 254 aa19.1■□□□□ 0.65
ZEB1-218ENST00000560196 FCHSD2O94868 740 aa19.09■□□□□ 0.65
ZEB1-218ENST00000560196 NLRP6P59044 892 aa19.09■□□□□ 0.65
ZEB1-218ENST00000560196 RRS1Q15050 365 aaKnown RBP19.09■□□□□ 0.65
ZEB1-218ENST00000560196 CCDC27Q2M243 656 aa19.09■□□□□ 0.65
ZEB1-218ENST00000560196 SALL2Q9Y467 1007 aaPredicted RBP19.09■□□□□ 0.65
ZEB1-218ENST00000560196 MARF1Q9Y4F3 1742 aaKnown RBP19.08■□□□□ 0.65
ZEB1-218ENST00000560196 SENP3-EIF4A1A0A087X0R7 540 aa19.08■□□□□ 0.64
ZEB1-218ENST00000560196 U2SURPO15042 1029 aaKnown RBP19.08■□□□□ 0.64
ZEB1-218ENST00000560196 PLEKHF1Q96S99 279 aa19.08■□□□□ 0.64
ZEB1-218ENST00000560196 XIRP1Q702N8 1843 aaKnown RBP19.08■□□□□ 0.64
ZEB1-218ENST00000560196 PPM1GO15355 546 aaPredicted RBP19.07■□□□□ 0.64
ZEB1-218ENST00000560196 GOLGA2Q08379 1002 aa19.07■□□□□ 0.64
ZEB1-218ENST00000560196 TCP11L2Q8N4U5 519 aa19.07■□□□□ 0.64
ZEB1-218ENST00000560196 ABTB2Q8N961 1025 aa19.07■□□□□ 0.64
ZEB1-218ENST00000560196 SBNO1A3KN83 1393 aa19.06■□□□□ 0.64
ZEB1-218ENST00000560196 ZNF335Q9H4Z2 1342 aaPredicted RBP19.06■□□□□ 0.64
ZEB1-218ENST00000560196 NEFLP07196 543 aa19.06■□□□□ 0.64
ZEB1-218ENST00000560196 SUPT16HQ9Y5B9 1047 aaKnown RBP19.06■□□□□ 0.64
ZEB1-218ENST00000560196 TRPM3Q9HCF6 1732 aaPredicted RBP19.05■□□□□ 0.64
ZEB1-218ENST00000560196 MAP3K19Q56UN5 1328 aa19.05■□□□□ 0.64
ZEB1-218ENST00000560196 PAK3O75914 559 aaPredicted RBP19.05■□□□□ 0.64
ZEB1-218ENST00000560196 PEAK1Q9H792 1746 aa19.05■□□□□ 0.64
ZEB1-218ENST00000560196 FLT4P35916 1363 aa19.05■□□□□ 0.64
ZEB1-218ENST00000560196 RNF123Q5XPI4 1314 aa19.04■□□□□ 0.64
ZEB1-218ENST00000560196 FOXO3O43524 673 aa19.04■□□□□ 0.64
ZEB1-218ENST00000560196 TRMT2AQ8IZ69 625 aaKnown RBP19.04■□□□□ 0.64
ZEB1-218ENST00000560196 CDCA7LQ96GN5 454 aa19.04■□□□□ 0.64
ZEB1-218ENST00000560196 SLFN5Q08AF3 891 aa19.03■□□□□ 0.64
ZEB1-218ENST00000560196 KRT28Q7Z3Y7 464 aa19.03■□□□□ 0.64
ZEB1-218ENST00000560196 RSPH6AQ9H0K4 717 aa19.03■□□□□ 0.64
ZEB1-218ENST00000560196 WDR63Q8IWG1 891 aa19.02■□□□□ 0.64
ZEB1-218ENST00000560196 WWC1Q8IX03 1113 aa19.02■□□□□ 0.64
ZEB1-218ENST00000560196 RTL1A6NKG5 1358 aa19.02■□□□□ 0.64
ZEB1-218ENST00000560196 MAPK8IP3Q9UPT6 1336 aa19.01■□□□□ 0.63
ZEB1-218ENST00000560196 SLIT3O75094 1523 aa19.01■□□□□ 0.63
ZEB1-218ENST00000560196 NFAT5O94916 1531 aa19.01■□□□□ 0.63
ZEB1-218ENST00000560196 E9PSI1 815 aa19.01■□□□□ 0.63
ZEB1-218ENST00000560196 EIF4A2Q14240 407 aaKnown RBP19.01■□□□□ 0.63
ZEB1-218ENST00000560196 DUSP27Q5VZP5 1158 aa19.01■□□□□ 0.63
ZEB1-218ENST00000560196 KCNH5Q8NCM2 988 aa19.01■□□□□ 0.63
ZEB1-218ENST00000560196 USP19O94966 1318 aa19■□□□□ 0.63
ZEB1-218ENST00000560196 TMPOP42166 694 aaKnown RBP19■□□□□ 0.63
ZEB1-218ENST00000560196 NPHP3Q7Z494 1330 aa19■□□□□ 0.63
ZEB1-218ENST00000560196 ERICH6BQ5W0A0 696 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms