RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 NUTM2GQ5VZR2 741 aa22.22■■□□□ 1.15
RABGGTA-206ENST00000558649 RGS17Q9UGC6 210 aaPredicted RBP22.22■■□□□ 1.15
RABGGTA-206ENST00000558649 CRYBG1Q9Y4K1 1723 aa22.22■■□□□ 1.15
RABGGTA-206ENST00000558649 USP6P35125 1406 aa22.22■■□□□ 1.15
RABGGTA-206ENST00000558649 MON2Q7Z3U7 1717 aa22.2■■□□□ 1.14
RABGGTA-206ENST00000558649 SLC24A1O60721 1099 aa22.2■■□□□ 1.14
RABGGTA-206ENST00000558649 EIF4G2P78344 907 aaKnown RBP eCLIP22.2■■□□□ 1.14
RABGGTA-206ENST00000558649 AFF2P51816 1311 aa22.2■■□□□ 1.14
RABGGTA-206ENST00000558649 NRKQ7Z2Y5 1582 aa22.2■■□□□ 1.14
RABGGTA-206ENST00000558649 PHRF1Q9P1Y6 1649 aaKnown RBP22.2■■□□□ 1.14
RABGGTA-206ENST00000558649 HSPA5P11021 654 aaKnown RBP22.19■■□□□ 1.14
RABGGTA-206ENST00000558649 NGLY1Q96IV0 654 aa22.19■■□□□ 1.14
RABGGTA-206ENST00000558649 KTN1Q86UP2 1357 aaKnown RBP22.18■■□□□ 1.14
RABGGTA-206ENST00000558649 ILDR2Q71H61 639 aa22.18■■□□□ 1.14
RABGGTA-206ENST00000558649 ABTB2Q8N961 1025 aa22.18■■□□□ 1.14
RABGGTA-206ENST00000558649 SLC12A5Q9H2X9 1139 aa22.17■■□□□ 1.14
RABGGTA-206ENST00000558649 PIK3C2AO00443 1686 aa22.17■■□□□ 1.14
RABGGTA-206ENST00000558649 CD163L1Q9NR16 1453 aa22.16■■□□□ 1.14
RABGGTA-206ENST00000558649 CPSF1Q10570 1443 aaKnown RBP22.16■■□□□ 1.14
RABGGTA-206ENST00000558649 PLCH1Q4KWH8 1693 aa22.15■■□□□ 1.14
RABGGTA-206ENST00000558649 POTEAQ6S8J7 498 aa22.15■■□□□ 1.14
RABGGTA-206ENST00000558649 PUS7Q96PZ0 661 aaKnown RBP22.15■■□□□ 1.14
RABGGTA-206ENST00000558649 ZNF692Q9BU19 519 aaPredicted RBP22.15■■□□□ 1.14
RABGGTA-206ENST00000558649 BRD4O60885 1362 aaPredicted RBP22.14■■□□□ 1.14
RABGGTA-206ENST00000558649 ZNF772Q68DY9 489 aaPredicted RBP22.14■■□□□ 1.13
RABGGTA-206ENST00000558649 HDGFL2Q7Z4V5 671 aaPredicted RBP22.14■■□□□ 1.13
RABGGTA-206ENST00000558649 MYOM1P52179 1685 aa22.14■■□□□ 1.13
RABGGTA-206ENST00000558649 A0A1W2PP64 1363 aa22.13■■□□□ 1.13
RABGGTA-206ENST00000558649 POLR3GLQ9BT43 218 aa22.13■■□□□ 1.13
RABGGTA-206ENST00000558649 SSH2Q76I76 1423 aa22.13■■□□□ 1.13
RABGGTA-206ENST00000558649 CDCA8Q53HL2 280 aa22.12■■□□□ 1.13
RABGGTA-206ENST00000558649 TERF2IPQ9NYB0 399 aa22.12■■□□□ 1.13
RABGGTA-206ENST00000558649 NINLQ9Y2I6 1382 aa22.12■■□□□ 1.13
RABGGTA-206ENST00000558649 TTC21BQ7Z4L5 1316 aa22.11■■□□□ 1.13
RABGGTA-206ENST00000558649 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.11■■□□□ 1.13
RABGGTA-206ENST00000558649 USP21Q9UK80 565 aa22.11■■□□□ 1.13
RABGGTA-206ENST00000558649 NLRP6P59044 892 aa22.09■■□□□ 1.13
RABGGTA-206ENST00000558649 NLRP13Q86W25 1043 aa22.09■■□□□ 1.13
RABGGTA-206ENST00000558649 COL14A1Q05707 1796 aaKnown RBP22.08■■□□□ 1.13
RABGGTA-206ENST00000558649 TTC21AQ8NDW8 1320 aa22.07■■□□□ 1.12
RABGGTA-206ENST00000558649 EDC4Q6P2E9 1401 aaKnown RBP22.07■■□□□ 1.12
RABGGTA-206ENST00000558649 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.07■■□□□ 1.12
RABGGTA-206ENST00000558649 NWD2Q9ULI1 1742 aa22.07■■□□□ 1.12
RABGGTA-206ENST00000558649 FNBP4Q8N3X1 1017 aaPredicted RBP22.07■■□□□ 1.12
RABGGTA-206ENST00000558649 USP19O94966 1318 aa22.06■■□□□ 1.12
RABGGTA-206ENST00000558649 ZC3H6P61129 1189 aaKnown RBP22.06■■□□□ 1.12
RABGGTA-206ENST00000558649 QTRT2Q9H974 415 aaKnown RBP22.06■■□□□ 1.12
RABGGTA-206ENST00000558649 SLIT2O94813 1529 aa22.06■■□□□ 1.12
RABGGTA-206ENST00000558649 BCL9LQ86UU0 1499 aa22.05■■□□□ 1.12
RABGGTA-206ENST00000558649 ANKRD36BQ8N2N9 1353 aa22.05■■□□□ 1.12
RABGGTA-206ENST00000558649 KIAA0232Q92628 1395 aa22.05■■□□□ 1.12
RABGGTA-206ENST00000558649 FAM83GA6ND36 823 aa22.05■■□□□ 1.12
RABGGTA-206ENST00000558649 PRDM11Q9NQV5 511 aa22.05■■□□□ 1.12
RABGGTA-206ENST00000558649 SLIT3O75094 1523 aa22.05■■□□□ 1.12
RABGGTA-206ENST00000558649 ZBTB7CA1YPR0 619 aa22.04■■□□□ 1.12
RABGGTA-206ENST00000558649 NME9Q86XW9 330 aa22.04■■□□□ 1.12
RABGGTA-206ENST00000558649 NRAPQ86VF7 1730 aa22.03■■□□□ 1.12
RABGGTA-206ENST00000558649 SOX12O15370 315 aa22.03■■□□□ 1.12
RABGGTA-206ENST00000558649 CHRNA2Q15822 529 aa22.03■■□□□ 1.12
RABGGTA-206ENST00000558649 ZRANB1Q9UGI0 708 aa22.03■■□□□ 1.12
RABGGTA-206ENST00000558649 GCP02774 474 aa22.02■■□□□ 1.12
RABGGTA-206ENST00000558649 USP54Q70EL1 1684 aa22.01■■□□□ 1.11
RABGGTA-206ENST00000558649 ATRNO75882 1429 aa22.01■■□□□ 1.11
RABGGTA-206ENST00000558649 RXRBP28702 533 aa22.01■■□□□ 1.11
RABGGTA-206ENST00000558649 UNC5CLQ8IV45 518 aa22.01■■□□□ 1.11
RABGGTA-206ENST00000558649 BTG4Q9NY30 223 aa22.01■■□□□ 1.11
RABGGTA-206ENST00000558649 TRPC5Q9UL62 973 aaPredicted RBP22.01■■□□□ 1.11
RABGGTA-206ENST00000558649 KIF20BQ96Q89 1820 aa22■■□□□ 1.11
RABGGTA-206ENST00000558649 C11orf95C9JLR9 678 aaPredicted RBP21.98■■□□□ 1.11
RABGGTA-206ENST00000558649 CCDC9Q9Y3X0 531 aaKnown RBP21.98■■□□□ 1.11
RABGGTA-206ENST00000558649 RBM6P78332 1123 aaKnown RBP21.97■■□□□ 1.11
RABGGTA-206ENST00000558649 LMO7Q8WWI1 1683 aa21.96■■□□□ 1.11
RABGGTA-206ENST00000558649 CPDO75976 1380 aa21.96■■□□□ 1.11
RABGGTA-206ENST00000558649 USP31Q70CQ4 1352 aa21.96■■□□□ 1.11
RABGGTA-206ENST00000558649 NSD3Q9BZ95 1437 aa21.96■■□□□ 1.11
RABGGTA-206ENST00000558649 NFAT5O94916 1531 aa21.96■■□□□ 1.11
RABGGTA-206ENST00000558649 GLI3P10071 1580 aa21.95■■□□□ 1.1
RABGGTA-206ENST00000558649 LTN1O94822 1766 aa21.94■■□□□ 1.1
RABGGTA-206ENST00000558649 KCNH5Q8NCM2 988 aa21.94■■□□□ 1.1
RABGGTA-206ENST00000558649 STRN4Q9NRL3 753 aa21.94■■□□□ 1.1
RABGGTA-206ENST00000558649 OVOS2A0A0J9YW53 1432 aa21.94■■□□□ 1.1
RABGGTA-206ENST00000558649 OVOS2Q6IE36 1432 aa21.94■■□□□ 1.1
RABGGTA-206ENST00000558649 RGS12O14924 1447 aa21.93■■□□□ 1.1
RABGGTA-206ENST00000558649 KIF7Q2M1P5 1343 aa21.93■■□□□ 1.1
RABGGTA-206ENST00000558649 CAMTA1Q9Y6Y1 1673 aa21.92■■□□□ 1.1
RABGGTA-206ENST00000558649 VPS72Q15906 364 aa21.92■■□□□ 1.1
RABGGTA-206ENST00000558649 COG3Q96JB2 828 aa21.92■■□□□ 1.1
RABGGTA-206ENST00000558649 GJD4Q96KN9 370 aaPredicted RBP21.92■■□□□ 1.1
RABGGTA-206ENST00000558649 CARD14Q9BXL6 1004 aa21.92■■□□□ 1.1
RABGGTA-206ENST00000558649 RGPD5Q99666 1765 aa21.92■■□□□ 1.1
RABGGTA-206ENST00000558649 CDK12Q9NYV4 1490 aaPredicted RBP21.91■■□□□ 1.1
RABGGTA-206ENST00000558649 GGNBP2Q9H3C7 697 aa21.91■■□□□ 1.1
RABGGTA-206ENST00000558649 COL18A1P39060 1754 aa21.9■■□□□ 1.1
RABGGTA-206ENST00000558649 EVA1CP58658 441 aa21.89■■□□□ 1.09
RABGGTA-206ENST00000558649 FYB1O15117 783 aa21.88■■□□□ 1.09
RABGGTA-206ENST00000558649 AATKQ6ZMQ8 1374 aa21.87■■□□□ 1.09
RABGGTA-206ENST00000558649 ARHGEF25Q86VW2 580 aa21.87■■□□□ 1.09
RABGGTA-206ENST00000558649 PANK3Q9H999 370 aa21.87■■□□□ 1.09
RABGGTA-206ENST00000558649 COL5A2P05997 1499 aaPredicted RBP21.87■■□□□ 1.09
RABGGTA-206ENST00000558649 SOCS7O14512 581 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms