RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 USP6P35125 1406 aa17.29■□□□□ 0.36
SMAD3-205ENST00000558428 ABCA3Q99758 1704 aa17.28■□□□□ 0.36
SMAD3-205ENST00000558428 MARF1Q9Y4F3 1742 aaKnown RBP17.28■□□□□ 0.36
SMAD3-205ENST00000558428 CABLES1Q8TDN4 633 aa17.28■□□□□ 0.36
SMAD3-205ENST00000558428 C8orf37Q96NL8 207 aa17.28■□□□□ 0.36
SMAD3-205ENST00000558428 ZNF692Q9BU19 519 aaPredicted RBP17.28■□□□□ 0.36
SMAD3-205ENST00000558428 CDCA8Q53HL2 280 aa17.27■□□□□ 0.36
SMAD3-205ENST00000558428 SLC12A5Q9H2X9 1139 aa17.27■□□□□ 0.36
SMAD3-205ENST00000558428 BRD4O60885 1362 aaPredicted RBP17.27■□□□□ 0.35
SMAD3-205ENST00000558428 NUTM2GQ5VZR2 741 aa17.26■□□□□ 0.35
SMAD3-205ENST00000558428 ABTB2Q8N961 1025 aa17.26■□□□□ 0.35
SMAD3-205ENST00000558428 RGS17Q9UGC6 210 aaPredicted RBP17.26■□□□□ 0.35
SMAD3-205ENST00000558428 CPSF1Q10570 1443 aaKnown RBP17.26■□□□□ 0.35
SMAD3-205ENST00000558428 KTN1Q86UP2 1357 aaKnown RBP17.26■□□□□ 0.35
SMAD3-205ENST00000558428 MON2Q7Z3U7 1717 aa17.25■□□□□ 0.35
SMAD3-205ENST00000558428 HDGFL2Q7Z4V5 671 aaPredicted RBP17.25■□□□□ 0.35
SMAD3-205ENST00000558428 NINLQ9Y2I6 1382 aa17.25■□□□□ 0.35
SMAD3-205ENST00000558428 CD163L1Q9NR16 1453 aa17.24■□□□□ 0.35
SMAD3-205ENST00000558428 AFF2P51816 1311 aa17.24■□□□□ 0.35
SMAD3-205ENST00000558428 NGLY1Q96IV0 654 aa17.24■□□□□ 0.35
SMAD3-205ENST00000558428 CRYBG1Q9Y4K1 1723 aa17.24■□□□□ 0.35
SMAD3-205ENST00000558428 SSH2Q76I76 1423 aa17.23■□□□□ 0.35
SMAD3-205ENST00000558428 TERF2IPQ9NYB0 399 aa17.23■□□□□ 0.35
SMAD3-205ENST00000558428 NRKQ7Z2Y5 1582 aa17.23■□□□□ 0.35
SMAD3-205ENST00000558428 TTC21BQ7Z4L5 1316 aa17.22■□□□□ 0.35
SMAD3-205ENST00000558428 ZNF772Q68DY9 489 aaPredicted RBP17.22■□□□□ 0.35
SMAD3-205ENST00000558428 A0A1W2PP64 1363 aa17.22■□□□□ 0.35
SMAD3-205ENST00000558428 PHRF1Q9P1Y6 1649 aaKnown RBP17.21■□□□□ 0.35
SMAD3-205ENST00000558428 NLRP13Q86W25 1043 aa17.21■□□□□ 0.35
SMAD3-205ENST00000558428 TTC21AQ8NDW8 1320 aa17.21■□□□□ 0.34
SMAD3-205ENST00000558428 PIK3C2AO00443 1686 aa17.2■□□□□ 0.34
SMAD3-205ENST00000558428 POTEAQ6S8J7 498 aa17.2■□□□□ 0.34
SMAD3-205ENST00000558428 POLR3GLQ9BT43 218 aa17.2■□□□□ 0.34
SMAD3-205ENST00000558428 NLRP6P59044 892 aa17.19■□□□□ 0.34
SMAD3-205ENST00000558428 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.19■□□□□ 0.34
SMAD3-205ENST00000558428 EDC4Q6P2E9 1401 aaKnown RBP17.19■□□□□ 0.34
SMAD3-205ENST00000558428 MYOM1P52179 1685 aa17.19■□□□□ 0.34
SMAD3-205ENST00000558428 ANKRD36BQ8N2N9 1353 aa17.18■□□□□ 0.34
SMAD3-205ENST00000558428 ILDR2Q71H61 639 aa17.18■□□□□ 0.34
SMAD3-205ENST00000558428 FNBP4Q8N3X1 1017 aaPredicted RBP17.18■□□□□ 0.34
SMAD3-205ENST00000558428 USP21Q9UK80 565 aa17.18■□□□□ 0.34
SMAD3-205ENST00000558428 USP19O94966 1318 aa17.18■□□□□ 0.34
SMAD3-205ENST00000558428 PLCH1Q4KWH8 1693 aa17.16■□□□□ 0.34
SMAD3-205ENST00000558428 FAM83GA6ND36 823 aa17.15■□□□□ 0.34
SMAD3-205ENST00000558428 ZC3H6P61129 1189 aaKnown RBP17.15■□□□□ 0.34
SMAD3-205ENST00000558428 NME9Q86XW9 330 aa17.15■□□□□ 0.34
SMAD3-205ENST00000558428 SLIT2O94813 1529 aa17.15■□□□□ 0.34
SMAD3-205ENST00000558428 NWD2Q9ULI1 1742 aa17.14■□□□□ 0.33
SMAD3-205ENST00000558428 GCP02774 474 aa17.14■□□□□ 0.33
SMAD3-205ENST00000558428 QTRT2Q9H974 415 aaKnown RBP17.14■□□□□ 0.33
SMAD3-205ENST00000558428 PRDM11Q9NQV5 511 aa17.14■□□□□ 0.33
SMAD3-205ENST00000558428 SLIT3O75094 1523 aa17.14■□□□□ 0.33
SMAD3-205ENST00000558428 COL14A1Q05707 1796 aaKnown RBP17.14■□□□□ 0.33
SMAD3-205ENST00000558428 KIAA0232Q92628 1395 aa17.14■□□□□ 0.33
SMAD3-205ENST00000558428 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.13■□□□□ 0.33
SMAD3-205ENST00000558428 BCL9LQ86UU0 1499 aa17.13■□□□□ 0.33
SMAD3-205ENST00000558428 C11orf95C9JLR9 678 aaPredicted RBP17.13■□□□□ 0.33
SMAD3-205ENST00000558428 ZRANB1Q9UGI0 708 aa17.13■□□□□ 0.33
SMAD3-205ENST00000558428 UNC5CLQ8IV45 518 aa17.12■□□□□ 0.33
SMAD3-205ENST00000558428 TRPC5Q9UL62 973 aaPredicted RBP17.12■□□□□ 0.33
SMAD3-205ENST00000558428 USP31Q70CQ4 1352 aa17.12■□□□□ 0.33
SMAD3-205ENST00000558428 USP54Q70EL1 1684 aa17.11■□□□□ 0.33
SMAD3-205ENST00000558428 CHRNA2Q15822 529 aa17.11■□□□□ 0.33
SMAD3-205ENST00000558428 ATRNO75882 1429 aa17.11■□□□□ 0.33
SMAD3-205ENST00000558428 ZBTB7CA1YPR0 619 aa17.1■□□□□ 0.33
SMAD3-205ENST00000558428 SOX12O15370 315 aa17.1■□□□□ 0.33
SMAD3-205ENST00000558428 RXRBP28702 533 aa17.1■□□□□ 0.33
SMAD3-205ENST00000558428 KCNH5Q8NCM2 988 aa17.1■□□□□ 0.33
SMAD3-205ENST00000558428 BTG4Q9NY30 223 aa17.1■□□□□ 0.33
SMAD3-205ENST00000558428 CPDO75976 1380 aa17.1■□□□□ 0.33
SMAD3-205ENST00000558428 KIF7Q2M1P5 1343 aa17.09■□□□□ 0.33
SMAD3-205ENST00000558428 NRAPQ86VF7 1730 aa17.09■□□□□ 0.33
SMAD3-205ENST00000558428 KIF20BQ96Q89 1820 aa17.08■□□□□ 0.33
SMAD3-205ENST00000558428 OVOS2A0A0J9YW53 1432 aa17.08■□□□□ 0.32
SMAD3-205ENST00000558428 OVOS2Q6IE36 1432 aa17.08■□□□□ 0.32
SMAD3-205ENST00000558428 NSD3Q9BZ95 1437 aa17.08■□□□□ 0.32
SMAD3-205ENST00000558428 RBM6P78332 1123 aaKnown RBP17.08■□□□□ 0.32
SMAD3-205ENST00000558428 CARD14Q9BXL6 1004 aa17.08■□□□□ 0.32
SMAD3-205ENST00000558428 COG3Q96JB2 828 aa17.07■□□□□ 0.32
SMAD3-205ENST00000558428 NFAT5O94916 1531 aa17.06■□□□□ 0.32
SMAD3-205ENST00000558428 CCDC9Q9Y3X0 531 aaKnown RBP17.06■□□□□ 0.32
SMAD3-205ENST00000558428 LMO7Q8WWI1 1683 aa17.05■□□□□ 0.32
SMAD3-205ENST00000558428 FYB1O15117 783 aa17.05■□□□□ 0.32
SMAD3-205ENST00000558428 VPS72Q15906 364 aa17.05■□□□□ 0.32
SMAD3-205ENST00000558428 GJD4Q96KN9 370 aaPredicted RBP17.05■□□□□ 0.32
SMAD3-205ENST00000558428 GGNBP2Q9H3C7 697 aa17.05■□□□□ 0.32
SMAD3-205ENST00000558428 PANK3Q9H999 370 aa17.05■□□□□ 0.32
SMAD3-205ENST00000558428 ZEB1P37275 1124 aaPredicted RBP17.04■□□□□ 0.32
SMAD3-205ENST00000558428 ARHGEF25Q86VW2 580 aa17.04■□□□□ 0.32
SMAD3-205ENST00000558428 STRN4Q9NRL3 753 aa17.04■□□□□ 0.32
SMAD3-205ENST00000558428 CAMTA1Q9Y6Y1 1673 aa17.04■□□□□ 0.32
SMAD3-205ENST00000558428 AATKQ6ZMQ8 1374 aa17.03■□□□□ 0.32
SMAD3-205ENST00000558428 LTN1O94822 1766 aa17.03■□□□□ 0.32
SMAD3-205ENST00000558428 CDK12Q9NYV4 1490 aaPredicted RBP17.03■□□□□ 0.32
SMAD3-205ENST00000558428 CCDC7Q96M83 1385 aa17.02■□□□□ 0.32
SMAD3-205ENST00000558428 GLI3P10071 1580 aa17.02■□□□□ 0.32
SMAD3-205ENST00000558428 COL18A1P39060 1754 aa17.02■□□□□ 0.32
SMAD3-205ENST00000558428 RGPD5Q99666 1765 aa17.02■□□□□ 0.32
SMAD3-205ENST00000558428 CGNL1Q0VF96 1302 aa17.02■□□□□ 0.32
SMAD3-205ENST00000558428 EVA1CP58658 441 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms