RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 SMTNL1A8MU46 457 aa4.39□□□□□ -1.71
ATXN3-248ENST00000558190 SURF6O75683 361 aaKnown RBP4.39□□□□□ -1.71
ATXN3-248ENST00000558190 ZRSR2Q15696 482 aaKnown RBP4.39□□□□□ -1.71
ATXN3-248ENST00000558190 SEC24BO95487 1268 aa4.39□□□□□ -1.71
ATXN3-248ENST00000558190 MCM2P49736 904 aa4.39□□□□□ -1.71
ATXN3-248ENST00000558190 INTS3Q68E01 1043 aaKnown RBP4.39□□□□□ -1.71
ATXN3-248ENST00000558190 C17orf53Q8N3J3 647 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-248ENST00000558190 TTC12Q9H892 705 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-248ENST00000558190 NEFHP12036 1026 aa4.39□□□□□ -1.71
ATXN3-248ENST00000558190 LTV1Q96GA3 475 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-248ENST00000558190 STK31Q9BXU1 1019 aa4.39□□□□□ -1.71
ATXN3-248ENST00000558190 PRM3Q9NNZ6 103 aa4.39□□□□□ -1.71
ATXN3-248ENST00000558190 ZBED9Q6R2W3 1325 aa4.38□□□□□ -1.71
ATXN3-248ENST00000558190 MCM6Q14566 821 aa4.38□□□□□ -1.71
ATXN3-248ENST00000558190 ERLIN2O94905 339 aa4.38□□□□□ -1.71
ATXN3-248ENST00000558190 TAX1BP1Q86VP1 789 aa4.38□□□□□ -1.71
ATXN3-248ENST00000558190 ZSWIM4Q9H7M6 989 aa4.38□□□□□ -1.71
ATXN3-248ENST00000558190 SARNPP82979 210 aaKnown RBP4.38□□□□□ -1.71
ATXN3-248ENST00000558190 BAG4O95429 457 aaKnown RBP4.38□□□□□ -1.71
ATXN3-248ENST00000558190 GIMAP6Q6P9H5 292 aa4.38□□□□□ -1.71
ATXN3-248ENST00000558190 DDX19BQ9UMR2 479 aa4.38□□□□□ -1.71
ATXN3-248ENST00000558190 CFDP1Q9UEE9 299 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-248ENST00000558190 DHX8Q14562 1220 aaKnown RBP4.38□□□□□ -1.71
ATXN3-248ENST00000558190 SRRTQ9BXP5 876 aaKnown RBP4.38□□□□□ -1.71
ATXN3-248ENST00000558190 EBAG9O00559 213 aa4.38□□□□□ -1.71
ATXN3-248ENST00000558190 ANO2Q9NQ90 1003 aa4.38□□□□□ -1.71
ATXN3-248ENST00000558190 TERF1P54274 439 aa4.38□□□□□ -1.71
ATXN3-248ENST00000558190 FILIP1LQ4L180 1135 aa4.38□□□□□ -1.71
ATXN3-248ENST00000558190 ZBTB12Q9Y330 459 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-248ENST00000558190 ZSCAN31Q96LW9 406 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-248ENST00000558190 CHD1LQ86WJ1 897 aa4.38□□□□□ -1.71
ATXN3-248ENST00000558190 PAIP2Q9BPZ3 127 aaKnown RBP4.38□□□□□ -1.71
ATXN3-248ENST00000558190 KRBA2Q6ZNG9 492 aa4.38□□□□□ -1.71
ATXN3-248ENST00000558190 GPATCH3Q96I76 525 aa4.38□□□□□ -1.71
ATXN3-248ENST00000558190 MPHOSPH10O00566 681 aaKnown RBP4.38□□□□□ -1.71
ATXN3-248ENST00000558190 CKAP2LQ8IYA6 745 aa4.38□□□□□ -1.71
ATXN3-248ENST00000558190 DCAF1Q9Y4B6 1507 aa4.38□□□□□ -1.71
ATXN3-248ENST00000558190 WDR33Q9C0J8 1336 aaKnown RBP4.38□□□□□ -1.71
ATXN3-248ENST00000558190 TTC31Q49AM3 519 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-248ENST00000558190 DDX54Q8TDD1 881 aaKnown RBP4.37□□□□□ -1.71
ATXN3-248ENST00000558190 CCDC114Q96M63 670 aa4.37□□□□□ -1.71
ATXN3-248ENST00000558190 CFAP45Q9UL16 551 aa4.37□□□□□ -1.71
ATXN3-248ENST00000558190 MICALL1Q8N3F8 863 aa4.37□□□□□ -1.71
ATXN3-248ENST00000558190 NECTIN2Q92692 538 aa4.37□□□□□ -1.71
ATXN3-248ENST00000558190 MICALCLQ6ZW33 695 aa4.37□□□□□ -1.71
ATXN3-248ENST00000558190 KINO60870 393 aaKnown RBP4.37□□□□□ -1.71
ATXN3-248ENST00000558190 CAPN2P17655 700 aa4.37□□□□□ -1.71
ATXN3-248ENST00000558190 TRIM29Q14134 588 aa4.37□□□□□ -1.71
ATXN3-248ENST00000558190 ENOX2Q16206 610 aaKnown RBP4.37□□□□□ -1.71
ATXN3-248ENST00000558190 RUFY1Q96T51 708 aa4.37□□□□□ -1.71
ATXN3-248ENST00000558190 ME1P48163 572 aa4.37□□□□□ -1.71
ATXN3-248ENST00000558190 KIF20AO95235 890 aa4.37□□□□□ -1.71
ATXN3-248ENST00000558190 GOLGA6L7A0A1B0GV03 622 aa4.37□□□□□ -1.71
ATXN3-248ENST00000558190 CTR9Q6PD62 1173 aa4.37□□□□□ -1.71
ATXN3-248ENST00000558190 MATR3P43243 847 aaKnown RBP eCLIP4.37□□□□□ -1.71
ATXN3-248ENST00000558190 DIXDC1Q155Q3 683 aa4.37□□□□□ -1.71
ATXN3-248ENST00000558190 K7ELQ4 463 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-248ENST00000558190 B4GALNT4Q76KP1 1039 aa4.37□□□□□ -1.71
ATXN3-248ENST00000558190 TCP11L2Q8N4U5 519 aa4.37□□□□□ -1.71
ATXN3-248ENST00000558190 API5Q9BZZ5 524 aaKnown RBP4.37□□□□□ -1.71
ATXN3-248ENST00000558190 SPATA32Q96LK8 384 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 NF2P35240 595 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 SLFN5Q08AF3 891 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 ZSCAN23Q3MJ62 389 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 CEP63Q96MT8 703 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 NEMFO60524 1076 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 DNAJC21Q5F1R6 531 aaKnown RBP4.36□□□□□ -1.71
ATXN3-248ENST00000558190 CCDC83Q8IWF9 413 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 CYP46A1Q9Y6A2 500 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 ATRIPQ8WXE1 791 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 SAFBQ15424 915 aaKnown RBP eCLIP4.36□□□□□ -1.71
ATXN3-248ENST00000558190 ARFGAP3Q9NP61 516 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 MAP2K2P36507 400 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 IVLP07476 585 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 ERC2O15083 957 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 NEBLO76041 1014 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 NAA25Q14CX7 972 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 C9orf78Q9NZ63 289 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-248ENST00000558190 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.36□□□□□ -1.71
ATXN3-248ENST00000558190 ZSCAN12O43309 604 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 UBE4AQ14139 1066 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 HSP90AB2PQ58FF8 381 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 LIMCH1Q9UPQ0 1083 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 PDCP20941 246 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 E2F4Q16254 413 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 ISM2Q6H9L7 571 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 NFXL1Q6ZNB6 911 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 PHACTR2O75167 634 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 CLSTN1O94985 981 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 RBM33Q96EV2 1170 aaKnown RBP4.36□□□□□ -1.71
ATXN3-248ENST00000558190 STK38Q15208 465 aa4.36□□□□□ -1.71
ATXN3-248ENST00000558190 UPF3BQ9BZI7 483 aaKnown RBP4.36□□□□□ -1.71
ATXN3-248ENST00000558190 V9GYY5 206 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-248ENST00000558190 NPM1P06748 294 aaKnown RBP eCLIP4.35□□□□□ -1.71
ATXN3-248ENST00000558190 ZEB2O60315 1214 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 SLC4A2P04920 1241 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 KIAA1328Q86T90 577 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 GOLIM4O00461 696 aa4.35□□□□□ -1.71
ATXN3-248ENST00000558190 EIF3JO75822 258 aaKnown RBP4.35□□□□□ -1.71
ATXN3-248ENST00000558190 DNAI1Q9UI46 699 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms