RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 AFF2P51816 1311 aa12.55□□□□□ -0.4
SPG11-207ENST00000558138 POLR3AO14802 1390 aaPredicted RBP12.55□□□□□ -0.4
SPG11-207ENST00000558138 TRPM3Q9HCF6 1732 aaPredicted RBP12.54□□□□□ -0.4
SPG11-207ENST00000558138 EIF4G2P78344 907 aaKnown RBP eCLIP12.54□□□□□ -0.4
SPG11-207ENST00000558138 CDCA8Q53HL2 280 aa12.54□□□□□ -0.4
SPG11-207ENST00000558138 ZBTB7CA1YPR0 619 aa12.52□□□□□ -0.41
SPG11-207ENST00000558138 TESK2Q96S53 571 aa12.52□□□□□ -0.41
SPG11-207ENST00000558138 ZNF692Q9BU19 519 aaPredicted RBP12.52□□□□□ -0.41
SPG11-207ENST00000558138 TERF2IPQ9NYB0 399 aa12.52□□□□□ -0.41
SPG11-207ENST00000558138 USP21Q9UK80 565 aa12.52□□□□□ -0.41
SPG11-207ENST00000558138 KTN1Q86UP2 1357 aaKnown RBP12.52□□□□□ -0.41
SPG11-207ENST00000558138 USP6P35125 1406 aa12.52□□□□□ -0.41
SPG11-207ENST00000558138 ALS2Q96Q42 1657 aa12.51□□□□□ -0.41
SPG11-207ENST00000558138 ILDR2Q71H61 639 aa12.51□□□□□ -0.41
SPG11-207ENST00000558138 MARF1Q9Y4F3 1742 aaKnown RBP12.51□□□□□ -0.41
SPG11-207ENST00000558138 HSPA5P11021 654 aaKnown RBP12.5□□□□□ -0.41
SPG11-207ENST00000558138 NLRP13Q86W25 1043 aa12.5□□□□□ -0.41
SPG11-207ENST00000558138 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.5□□□□□ -0.41
SPG11-207ENST00000558138 SLC12A5Q9H2X9 1139 aa12.5□□□□□ -0.41
SPG11-207ENST00000558138 RGS17Q9UGC6 210 aaPredicted RBP12.5□□□□□ -0.41
SPG11-207ENST00000558138 ABCA3Q99758 1704 aa12.49□□□□□ -0.41
SPG11-207ENST00000558138 BRD4O60885 1362 aaPredicted RBP12.49□□□□□ -0.41
SPG11-207ENST00000558138 NLRP6P59044 892 aa12.49□□□□□ -0.41
SPG11-207ENST00000558138 POTEAQ6S8J7 498 aa12.49□□□□□ -0.41
SPG11-207ENST00000558138 CCDC9Q9Y3X0 531 aaKnown RBP12.49□□□□□ -0.41
SPG11-207ENST00000558138 AKAP12Q02952 1782 aa12.48□□□□□ -0.41
SPG11-207ENST00000558138 NINLQ9Y2I6 1382 aa12.48□□□□□ -0.41
SPG11-207ENST00000558138 SOX12O15370 315 aa12.48□□□□□ -0.41
SPG11-207ENST00000558138 RXRBP28702 533 aa12.48□□□□□ -0.41
SPG11-207ENST00000558138 ZC3H6P61129 1189 aaKnown RBP12.48□□□□□ -0.41
SPG11-207ENST00000558138 PUS7Q96PZ0 661 aaKnown RBP12.48□□□□□ -0.41
SPG11-207ENST00000558138 QTRT2Q9H974 415 aaKnown RBP12.48□□□□□ -0.41
SPG11-207ENST00000558138 PRDM11Q9NQV5 511 aa12.48□□□□□ -0.41
SPG11-207ENST00000558138 TRPC5Q9UL62 973 aaPredicted RBP12.48□□□□□ -0.41
SPG11-207ENST00000558138 TTC21BQ7Z4L5 1316 aa12.47□□□□□ -0.41
SPG11-207ENST00000558138 TTC21AQ8NDW8 1320 aa12.46□□□□□ -0.41
SPG11-207ENST00000558138 PHRF1Q9P1Y6 1649 aaKnown RBP12.46□□□□□ -0.41
SPG11-207ENST00000558138 MON2Q7Z3U7 1717 aa12.45□□□□□ -0.42
SPG11-207ENST00000558138 A0A1W2PP64 1363 aa12.45□□□□□ -0.42
SPG11-207ENST00000558138 CPSF1Q10570 1443 aaKnown RBP12.45□□□□□ -0.42
SPG11-207ENST00000558138 PLCH1Q4KWH8 1693 aa12.45□□□□□ -0.42
SPG11-207ENST00000558138 KIAA0232Q92628 1395 aa12.44□□□□□ -0.42
SPG11-207ENST00000558138 A0A0G2JS52 829 aa12.44□□□□□ -0.42
SPG11-207ENST00000558138 RBM6P78332 1123 aaKnown RBP12.44□□□□□ -0.42
SPG11-207ENST00000558138 MYT1Q01538 1121 aa12.44□□□□□ -0.42
SPG11-207ENST00000558138 CHRNA2Q15822 529 aa12.44□□□□□ -0.42
SPG11-207ENST00000558138 UNC5CLQ8IV45 518 aa12.44□□□□□ -0.42
SPG11-207ENST00000558138 FNBP4Q8N3X1 1017 aaPredicted RBP12.44□□□□□ -0.42
SPG11-207ENST00000558138 BTG4Q9NY30 223 aa12.44□□□□□ -0.42
SPG11-207ENST00000558138 EDC4Q6P2E9 1401 aaKnown RBP12.44□□□□□ -0.42
SPG11-207ENST00000558138 ANKRD36BQ8N2N9 1353 aa12.43□□□□□ -0.42
SPG11-207ENST00000558138 COL14A1Q05707 1796 aaKnown RBP12.43□□□□□ -0.42
SPG11-207ENST00000558138 PIK3C2AO00443 1686 aa12.43□□□□□ -0.42
SPG11-207ENST00000558138 FAM83GA6ND36 823 aa12.43□□□□□ -0.42
SPG11-207ENST00000558138 EVA1CP58658 441 aa12.43□□□□□ -0.42
SPG11-207ENST00000558138 NME9Q86XW9 330 aa12.43□□□□□ -0.42
SPG11-207ENST00000558138 STRN4Q9NRL3 753 aa12.43□□□□□ -0.42
SPG11-207ENST00000558138 NRKQ7Z2Y5 1582 aa12.43□□□□□ -0.42
SPG11-207ENST00000558138 CRYBG1Q9Y4K1 1723 aa12.42□□□□□ -0.42
SPG11-207ENST00000558138 USP19O94966 1318 aa12.42□□□□□ -0.42
SPG11-207ENST00000558138 CD163L1Q9NR16 1453 aa12.42□□□□□ -0.42
SPG11-207ENST00000558138 GCP02774 474 aa12.42□□□□□ -0.42
SPG11-207ENST00000558138 KCNH5Q8NCM2 988 aa12.42□□□□□ -0.42
SPG11-207ENST00000558138 SSH2Q76I76 1423 aa12.41□□□□□ -0.42
SPG11-207ENST00000558138 COG3Q96JB2 828 aa12.41□□□□□ -0.42
SPG11-207ENST00000558138 NWD2Q9ULI1 1742 aa12.41□□□□□ -0.42
SPG11-207ENST00000558138 SLIT2O94813 1529 aa12.41□□□□□ -0.42
SPG11-207ENST00000558138 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.4□□□□□ -0.42
SPG11-207ENST00000558138 ATRNO75882 1429 aa12.4□□□□□ -0.42
SPG11-207ENST00000558138 ZRANB1Q9UGI0 708 aa12.4□□□□□ -0.42
SPG11-207ENST00000558138 BCL9LQ86UU0 1499 aa12.4□□□□□ -0.43
SPG11-207ENST00000558138 GJD4Q96KN9 370 aaPredicted RBP12.39□□□□□ -0.43
SPG11-207ENST00000558138 NSD3Q9BZ95 1437 aa12.38□□□□□ -0.43
SPG11-207ENST00000558138 SLIT3O75094 1523 aa12.38□□□□□ -0.43
SPG11-207ENST00000558138 SOCS7O14512 581 aa12.38□□□□□ -0.43
SPG11-207ENST00000558138 CSB-PGBD3P0DP91 1061 aa12.38□□□□□ -0.43
SPG11-207ENST00000558138 VPS72Q15906 364 aa12.38□□□□□ -0.43
SPG11-207ENST00000558138 USP35Q9P2H5 1018 aa12.38□□□□□ -0.43
SPG11-207ENST00000558138 MYOM1P52179 1685 aa12.38□□□□□ -0.43
SPG11-207ENST00000558138 GGNBP2Q9H3C7 697 aa12.37□□□□□ -0.43
SPG11-207ENST00000558138 CPDO75976 1380 aa12.37□□□□□ -0.43
SPG11-207ENST00000558138 RGS12O14924 1447 aa12.37□□□□□ -0.43
SPG11-207ENST00000558138 KIF20BQ96Q89 1820 aa12.36□□□□□ -0.43
SPG11-207ENST00000558138 NRAPQ86VF7 1730 aa12.36□□□□□ -0.43
SPG11-207ENST00000558138 CDK12Q9NYV4 1490 aaPredicted RBP12.35□□□□□ -0.43
SPG11-207ENST00000558138 USP31Q70CQ4 1352 aa12.35□□□□□ -0.43
SPG11-207ENST00000558138 CGNL1Q0VF96 1302 aa12.35□□□□□ -0.43
SPG11-207ENST00000558138 FAM98CQ17RN3 349 aaKnown RBP12.34□□□□□ -0.43
SPG11-207ENST00000558138 TOM1L2Q6ZVM7 507 aa12.34□□□□□ -0.43
SPG11-207ENST00000558138 PANK3Q9H999 370 aa12.34□□□□□ -0.43
SPG11-207ENST00000558138 KIF7Q2M1P5 1343 aa12.34□□□□□ -0.43
SPG11-207ENST00000558138 AATKQ6ZMQ8 1374 aa12.33□□□□□ -0.44
SPG11-207ENST00000558138 AMPHP49418 695 aa12.33□□□□□ -0.44
SPG11-207ENST00000558138 LARP1Q6PKG0 1096 aaKnown RBP12.33□□□□□ -0.44
SPG11-207ENST00000558138 ARHGEF25Q86VW2 580 aa12.33□□□□□ -0.44
SPG11-207ENST00000558138 OVOS2A0A0J9YW53 1432 aa12.33□□□□□ -0.44
SPG11-207ENST00000558138 OVOS2Q6IE36 1432 aa12.33□□□□□ -0.44
SPG11-207ENST00000558138 GLI3P10071 1580 aa12.33□□□□□ -0.44
SPG11-207ENST00000558138 LTN1O94822 1766 aa12.33□□□□□ -0.44
SPG11-207ENST00000558138 USP54Q70EL1 1684 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms