RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 BAG6P46379 1132 aa24.13■■□□□ 1.45
NEK9-211ENST00000557673 FAM98CQ17RN3 349 aaKnown RBP24.13■■□□□ 1.45
NEK9-211ENST00000557673 TULP4Q9NRJ4 1543 aa24.12■■□□□ 1.45
NEK9-211ENST00000557673 PAK3O75914 559 aaPredicted RBP24.11■■□□□ 1.45
NEK9-211ENST00000557673 PRR36Q9H6K5 1346 aa24.1■■□□□ 1.45
NEK9-211ENST00000557673 TRPM3Q9HCF6 1732 aaPredicted RBP24.09■■□□□ 1.45
NEK9-211ENST00000557673 COL14A1Q05707 1796 aaKnown RBP24.08■■□□□ 1.45
NEK9-211ENST00000557673 PRDM11Q9NQV5 511 aa24.08■■□□□ 1.45
NEK9-211ENST00000557673 ALS2Q96Q42 1657 aa24.07■■□□□ 1.44
NEK9-211ENST00000557673 SPATA31A5Q5VU36 1347 aa24.07■■□□□ 1.44
NEK9-211ENST00000557673 SPATA31A7Q8IWB4 1347 aa24.07■■□□□ 1.44
NEK9-211ENST00000557673 NRAPQ86VF7 1730 aa24.04■■□□□ 1.44
NEK9-211ENST00000557673 NUDT16Q96DE0 195 aaKnown RBP24.03■■□□□ 1.44
NEK9-211ENST00000557673 EN1Q05925 392 aaPredicted RBP23.98■■□□□ 1.43
NEK9-211ENST00000557673 CDK19Q9BWU1 502 aa23.98■■□□□ 1.43
NEK9-211ENST00000557673 KIAA0232Q92628 1395 aa23.98■■□□□ 1.43
NEK9-211ENST00000557673 ATP7BP35670 1465 aa23.98■■□□□ 1.43
NEK9-211ENST00000557673 LRP5O75197 1615 aa23.98■■□□□ 1.43
NEK9-211ENST00000557673 PSDA5PKW4 1024 aaPredicted RBP23.97■■□□□ 1.43
NEK9-211ENST00000557673 ITSN1Q15811 1721 aa23.97■■□□□ 1.43
NEK9-211ENST00000557673 SPATA31A1Q5TZJ5 1347 aa23.97■■□□□ 1.43
NEK9-211ENST00000557673 CCDC61Q9Y6R9 512 aa23.97■■□□□ 1.43
NEK9-211ENST00000557673 FAM182BQ5T319 152 aa23.96■■□□□ 1.43
NEK9-211ENST00000557673 FAM196AQ6ZSG2 479 aa23.95■■□□□ 1.42
NEK9-211ENST00000557673 STRN4Q9NRL3 753 aa23.95■■□□□ 1.42
NEK9-211ENST00000557673 RGPD1P0DJD0 1748 aa23.95■■□□□ 1.42
NEK9-211ENST00000557673 DISP2A7MBM2 1401 aa23.94■■□□□ 1.42
NEK9-211ENST00000557673 CRYBG1Q9Y4K1 1723 aa23.94■■□□□ 1.42
NEK9-211ENST00000557673 EVA1CP58658 441 aa23.94■■□□□ 1.42
NEK9-211ENST00000557673 CHRNA2Q15822 529 aa23.94■■□□□ 1.42
NEK9-211ENST00000557673 NBPF8Q3BBV2 869 aa23.94■■□□□ 1.42
NEK9-211ENST00000557673 ARHGEF28Q8N1W1 1705 aaKnown RBP23.93■■□□□ 1.42
NEK9-211ENST00000557673 POLR3AO14802 1390 aaPredicted RBP23.93■■□□□ 1.42
NEK9-211ENST00000557673 THSD7AQ9UPZ6 1657 aa23.93■■□□□ 1.42
NEK9-211ENST00000557673 ZC3H6P61129 1189 aaKnown RBP23.93■■□□□ 1.42
NEK9-211ENST00000557673 ACEP12821 1306 aa23.92■■□□□ 1.42
NEK9-211ENST00000557673 PLEKHG3A1L390 1219 aa23.92■■□□□ 1.42
NEK9-211ENST00000557673 KIAA1210Q9ULL0 1709 aa23.91■■□□□ 1.42
NEK9-211ENST00000557673 NUTM2GQ5VZR2 741 aa23.91■■□□□ 1.42
NEK9-211ENST00000557673 ABTB2Q8N961 1025 aa23.9■■□□□ 1.42
NEK9-211ENST00000557673 PDE3BQ13370 1112 aa23.89■■□□□ 1.41
NEK9-211ENST00000557673 R3HDM1Q15032 1099 aaKnown RBP23.89■■□□□ 1.41
NEK9-211ENST00000557673 BARGINQ6ZT62 677 aa23.89■■□□□ 1.41
NEK9-211ENST00000557673 SIN3AQ96ST3 1273 aa23.89■■□□□ 1.41
NEK9-211ENST00000557673 TRIM37O94972 964 aa23.88■■□□□ 1.41
NEK9-211ENST00000557673 USP35Q9P2H5 1018 aa23.88■■□□□ 1.41
NEK9-211ENST00000557673 EZH2Q15910 746 aaKnown RBP23.87■■□□□ 1.41
NEK9-211ENST00000557673 PARD3Q8TEW0 1356 aa23.87■■□□□ 1.41
NEK9-211ENST00000557673 PHRF1Q9P1Y6 1649 aaKnown RBP23.86■■□□□ 1.41
NEK9-211ENST00000557673 NLRP13Q86W25 1043 aa23.86■■□□□ 1.41
NEK9-211ENST00000557673 CAMKK2Q96RR4 588 aa23.86■■□□□ 1.41
NEK9-211ENST00000557673 SSH2Q76I76 1423 aa23.85■■□□□ 1.41
NEK9-211ENST00000557673 APBA3O96018 575 aa23.85■■□□□ 1.41
NEK9-211ENST00000557673 CPDO75976 1380 aa23.85■■□□□ 1.41
NEK9-211ENST00000557673 SRPK2P78362 688 aaKnown RBP23.84■■□□□ 1.41
NEK9-211ENST00000557673 TCP11L2Q8N4U5 519 aa23.84■■□□□ 1.41
NEK9-211ENST00000557673 L3MBTL2Q969R5 705 aa23.84■■□□□ 1.41
NEK9-211ENST00000557673 THRAP3Q9Y2W1 955 aaKnown RBP23.84■■□□□ 1.41
NEK9-211ENST00000557673 BRD4O60885 1362 aaPredicted RBP23.83■■□□□ 1.41
NEK9-211ENST00000557673 NEUROD1Q13562 356 aa23.83■■□□□ 1.41
NEK9-211ENST00000557673 NBPF1Q3BBV0 1214 aa23.83■■□□□ 1.41
NEK9-211ENST00000557673 USP19O94966 1318 aa23.83■■□□□ 1.4
NEK9-211ENST00000557673 TNS1Q9HBL0 1735 aaKnown RBP23.82■■□□□ 1.4
NEK9-211ENST00000557673 C11orf95C9JLR9 678 aaPredicted RBP23.82■■□□□ 1.4
NEK9-211ENST00000557673 TOPAZ1Q8N9V7 1692 aa23.82■■□□□ 1.4
NEK9-211ENST00000557673 GCP02774 474 aa23.81■■□□□ 1.4
NEK9-211ENST00000557673 LARP1Q6PKG0 1096 aaKnown RBP23.81■■□□□ 1.4
NEK9-211ENST00000557673 CLSPNQ9HAW4 1339 aa23.81■■□□□ 1.4
NEK9-211ENST00000557673 CENPJQ9HC77 1338 aaPredicted RBP23.8■■□□□ 1.4
NEK9-211ENST00000557673 PPIP5K1Q6PFW1 1433 aa23.79■■□□□ 1.4
NEK9-211ENST00000557673 NBPF14Q5TI25 921 aa23.79■■□□□ 1.4
NEK9-211ENST00000557673 CAMTA1Q9Y6Y1 1673 aa23.79■■□□□ 1.4
NEK9-211ENST00000557673 NRKQ7Z2Y5 1582 aa23.78■■□□□ 1.4
NEK9-211ENST00000557673 CABP2Q9NPB3 220 aa23.76■■□□□ 1.39
NEK9-211ENST00000557673 TRPM1Q7Z4N2 1603 aa23.75■■□□□ 1.39
NEK9-211ENST00000557673 LMO7Q8WWI1 1683 aa23.73■■□□□ 1.39
NEK9-211ENST00000557673 NLRP6P59044 892 aa23.73■■□□□ 1.39
NEK9-211ENST00000557673 CCER1Q8TC90 406 aaPredicted RBP23.72■■□□□ 1.39
NEK9-211ENST00000557673 CABP1Q9NZU7 370 aa23.72■■□□□ 1.39
NEK9-211ENST00000557673 TONSLQ96HA7 1378 aa23.72■■□□□ 1.39
NEK9-211ENST00000557673 COL5A2P05997 1499 aaPredicted RBP23.72■■□□□ 1.39
NEK9-211ENST00000557673 CRB1P82279 1406 aa23.71■■□□□ 1.39
NEK9-211ENST00000557673 AATKQ6ZMQ8 1374 aa23.7■■□□□ 1.38
NEK9-211ENST00000557673 USP6P35125 1406 aa23.69■■□□□ 1.38
NEK9-211ENST00000557673 ZBTB7CA1YPR0 619 aa23.69■■□□□ 1.38
NEK9-211ENST00000557673 QRICH2Q9H0J4 1663 aa23.69■■□□□ 1.38
NEK9-211ENST00000557673 EVC2Q86UK5 1308 aa23.67■■□□□ 1.38
NEK9-211ENST00000557673 OVOS2A0A0G2JMS6 1433 aa23.67■■□□□ 1.38
NEK9-211ENST00000557673 OVOS2A0A0J9YW53 1432 aa23.67■■□□□ 1.38
NEK9-211ENST00000557673 OVOS2Q6IE36 1432 aa23.67■■□□□ 1.38
NEK9-211ENST00000557673 DDB1Q16531 1140 aa23.66■■□□□ 1.38
NEK9-211ENST00000557673 TOM1L2Q6ZVM7 507 aa23.66■■□□□ 1.38
NEK9-211ENST00000557673 ROCK2O75116 1388 aaKnown RBP23.65■■□□□ 1.38
NEK9-211ENST00000557673 PARP4Q9UKK3 1724 aaKnown RBP23.65■■□□□ 1.38
NEK9-211ENST00000557673 RREB1Q92766 1687 aa23.65■■□□□ 1.38
NEK9-211ENST00000557673 ZNF692Q9BU19 519 aaPredicted RBP23.65■■□□□ 1.38
NEK9-211ENST00000557673 CDCA7Q9BWT1 371 aaPredicted RBP23.64■■□□□ 1.37
NEK9-211ENST00000557673 SPON1Q9HCB6 807 aa23.64■■□□□ 1.37
NEK9-211ENST00000557673 PLSCR1O15162 318 aa23.63■■□□□ 1.37
NEK9-211ENST00000557673 KCNH5Q8NCM2 988 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms