RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 GPRASP1Q5JY77 1395 aa27.28■■□□□ 1.96
ABCD4-228ENST00000557588 POGKQ9P215 609 aa27.28■■□□□ 1.96
ABCD4-228ENST00000557588 ACIN1Q9UKV3 1341 aaKnown RBP27.27■■□□□ 1.96
ABCD4-228ENST00000557588 SPATA31A5Q5VU36 1347 aa27.26■■□□□ 1.95
ABCD4-228ENST00000557588 SPATA31A7Q8IWB4 1347 aa27.26■■□□□ 1.95
ABCD4-228ENST00000557588 PRR36Q9H6K5 1346 aa27.24■■□□□ 1.95
ABCD4-228ENST00000557588 EN1Q05925 392 aaPredicted RBP27.23■■□□□ 1.95
ABCD4-228ENST00000557588 ITSN1Q15811 1721 aa27.21■■□□□ 1.95
ABCD4-228ENST00000557588 PHRF1Q9P1Y6 1649 aaKnown RBP27.21■■□□□ 1.95
ABCD4-228ENST00000557588 HIRIP3Q9BW71 556 aaPredicted RBP27.2■■□□□ 1.94
ABCD4-228ENST00000557588 FAM182BQ5T319 152 aa27.18■■□□□ 1.94
ABCD4-228ENST00000557588 MINK1Q8N4C8 1332 aaPredicted RBP27.17■■□□□ 1.94
ABCD4-228ENST00000557588 TRAK1Q9UPV9 953 aa27.17■■□□□ 1.94
ABCD4-228ENST00000557588 WASLO00401 505 aaPredicted RBP27.16■■□□□ 1.94
ABCD4-228ENST00000557588 R3HDM1Q15032 1099 aaKnown RBP27.16■■□□□ 1.94
ABCD4-228ENST00000557588 PRDM11Q9NQV5 511 aa27.16■■□□□ 1.94
ABCD4-228ENST00000557588 ATP7BP35670 1465 aa27.16■■□□□ 1.94
ABCD4-228ENST00000557588 ARHGEF28Q8N1W1 1705 aaKnown RBP27.16■■□□□ 1.94
ABCD4-228ENST00000557588 SPATA31A1Q5TZJ5 1347 aa27.15■■□□□ 1.94
ABCD4-228ENST00000557588 RREB1Q92766 1687 aa27.14■■□□□ 1.93
ABCD4-228ENST00000557588 PARD3Q8TEW0 1356 aa27.13■■□□□ 1.93
ABCD4-228ENST00000557588 KIAA0232Q92628 1395 aa27.13■■□□□ 1.93
ABCD4-228ENST00000557588 NGDNQ8NEJ9 315 aaKnown RBP27.12■■□□□ 1.93
ABCD4-228ENST00000557588 EZH2Q15910 746 aaKnown RBP27.11■■□□□ 1.93
ABCD4-228ENST00000557588 TOPAZ1Q8N9V7 1692 aa27.11■■□□□ 1.93
ABCD4-228ENST00000557588 PAK3O75914 559 aaPredicted RBP27.09■■□□□ 1.93
ABCD4-228ENST00000557588 CAMKK2Q96RR4 588 aa27.09■■□□□ 1.93
ABCD4-228ENST00000557588 NUP188Q5SRE5 1749 aa27.08■■□□□ 1.93
ABCD4-228ENST00000557588 FAM196AQ6ZSG2 479 aa27.08■■□□□ 1.93
ABCD4-228ENST00000557588 NRKQ7Z2Y5 1582 aa27.08■■□□□ 1.93
ABCD4-228ENST00000557588 TRIM37O94972 964 aa27.05■■□□□ 1.92
ABCD4-228ENST00000557588 SSH2Q76I76 1423 aa27.05■■□□□ 1.92
ABCD4-228ENST00000557588 LMO7Q8WWI1 1683 aa27.05■■□□□ 1.92
ABCD4-228ENST00000557588 CHRNA2Q15822 529 aa27.04■■□□□ 1.92
ABCD4-228ENST00000557588 POLR3AO14802 1390 aaPredicted RBP27.03■■□□□ 1.92
ABCD4-228ENST00000557588 RAB3GAP2Q9H2M9 1393 aa27.03■■□□□ 1.92
ABCD4-228ENST00000557588 NUDT16Q96DE0 195 aaKnown RBP27.02■■□□□ 1.92
ABCD4-228ENST00000557588 STAC3Q96MF2 364 aa27.02■■□□□ 1.92
ABCD4-228ENST00000557588 STRN4Q9NRL3 753 aa27.02■■□□□ 1.92
ABCD4-228ENST00000557588 BARGINQ6ZT62 677 aa27.01■■□□□ 1.91
ABCD4-228ENST00000557588 DCAF11Q8TEB1 546 aa27■■□□□ 1.91
ABCD4-228ENST00000557588 CAMTA1Q9Y6Y1 1673 aa27■■□□□ 1.91
ABCD4-228ENST00000557588 APBA3O96018 575 aa26.99■■□□□ 1.91
ABCD4-228ENST00000557588 ZC3H6P61129 1189 aaKnown RBP26.98■■□□□ 1.91
ABCD4-228ENST00000557588 KDM2AQ9Y2K7 1162 aa26.98■■□□□ 1.91
ABCD4-228ENST00000557588 PARP4Q9UKK3 1724 aaKnown RBP26.98■■□□□ 1.91
ABCD4-228ENST00000557588 CPDO75976 1380 aa26.97■■□□□ 1.91
ABCD4-228ENST00000557588 USP35Q9P2H5 1018 aa26.95■■□□□ 1.9
ABCD4-228ENST00000557588 USP19O94966 1318 aa26.94■■□□□ 1.9
ABCD4-228ENST00000557588 PDE3BQ13370 1112 aa26.94■■□□□ 1.9
ABCD4-228ENST00000557588 NUTM2GQ5VZR2 741 aa26.94■■□□□ 1.9
ABCD4-228ENST00000557588 RGPD3A6NKT7 1758 aaPredicted RBP26.94■■□□□ 1.9
ABCD4-228ENST00000557588 RGPD4Q7Z3J3 1758 aa26.94■■□□□ 1.9
ABCD4-228ENST00000557588 ACEP12821 1306 aa26.93■■□□□ 1.9
ABCD4-228ENST00000557588 KIAA1210Q9ULL0 1709 aa26.93■■□□□ 1.9
ABCD4-228ENST00000557588 TCP11L2Q8N4U5 519 aa26.92■■□□□ 1.9
ABCD4-228ENST00000557588 CDK19Q9BWU1 502 aa26.92■■□□□ 1.9
ABCD4-228ENST00000557588 EVA1CP58658 441 aa26.91■■□□□ 1.9
ABCD4-228ENST00000557588 LARP1Q6PKG0 1096 aaKnown RBP26.91■■□□□ 1.9
ABCD4-228ENST00000557588 PEAK1Q9H792 1746 aa26.9■■□□□ 1.9
ABCD4-228ENST00000557588 COL5A2P05997 1499 aaPredicted RBP26.9■■□□□ 1.9
ABCD4-228ENST00000557588 PLEKHG3A1L390 1219 aa26.9■■□□□ 1.9
ABCD4-228ENST00000557588 NBPF8Q3BBV2 869 aa26.9■■□□□ 1.9
ABCD4-228ENST00000557588 CCDC61Q9Y6R9 512 aa26.9■■□□□ 1.9
ABCD4-228ENST00000557588 NBPF14Q5TI25 921 aa26.89■■□□□ 1.9
ABCD4-228ENST00000557588 THRAP3Q9Y2W1 955 aaKnown RBP26.89■■□□□ 1.9
ABCD4-228ENST00000557588 LRRC37A3O60309 1634 aa26.87■■□□□ 1.89
ABCD4-228ENST00000557588 ABTB2Q8N961 1025 aa26.86■■□□□ 1.89
ABCD4-228ENST00000557588 NINLQ9Y2I6 1382 aa26.84■■□□□ 1.89
ABCD4-228ENST00000557588 OVOS2A0A0G2JMS6 1433 aa26.84■■□□□ 1.89
ABCD4-228ENST00000557588 OVOS2A0A0J9YW53 1432 aa26.84■■□□□ 1.89
ABCD4-228ENST00000557588 OVOS2Q6IE36 1432 aa26.84■■□□□ 1.89
ABCD4-228ENST00000557588 C11orf95C9JLR9 678 aaPredicted RBP26.84■■□□□ 1.89
ABCD4-228ENST00000557588 YY1P25490 414 aa26.84■■□□□ 1.89
ABCD4-228ENST00000557588 SBF2Q86WG5 1849 aa26.83■■□□□ 1.89
ABCD4-228ENST00000557588 CRB1P82279 1406 aa26.83■■□□□ 1.89
ABCD4-228ENST00000557588 WNK3Q9BYP7 1800 aa26.82■■□□□ 1.88
ABCD4-228ENST00000557588 SPON1Q9HCB6 807 aa26.82■■□□□ 1.88
ABCD4-228ENST00000557588 BRD4O60885 1362 aaPredicted RBP26.82■■□□□ 1.88
ABCD4-228ENST00000557588 PPIP5K1Q6PFW1 1433 aa26.82■■□□□ 1.88
ABCD4-228ENST00000557588 SLIT3O75094 1523 aa26.81■■□□□ 1.88
ABCD4-228ENST00000557588 GCP02774 474 aa26.81■■□□□ 1.88
ABCD4-228ENST00000557588 CASZ1Q86V15 1759 aa26.81■■□□□ 1.88
ABCD4-228ENST00000557588 NLRP13Q86W25 1043 aa26.8■■□□□ 1.88
ABCD4-228ENST00000557588 KCNQ2O43526 872 aa26.79■■□□□ 1.88
ABCD4-228ENST00000557588 PPP1R1BQ9UD71 204 aaPredicted RBP26.78■■□□□ 1.88
ABCD4-228ENST00000557588 AATKQ6ZMQ8 1374 aa26.76■■□□□ 1.87
ABCD4-228ENST00000557588 COL18A1P39060 1754 aa26.75■■□□□ 1.87
ABCD4-228ENST00000557588 QRICH2Q9H0J4 1663 aa26.75■■□□□ 1.87
ABCD4-228ENST00000557588 USP6P35125 1406 aa26.74■■□□□ 1.87
ABCD4-228ENST00000557588 PIK3C2AO00443 1686 aa26.73■■□□□ 1.87
ABCD4-228ENST00000557588 PLSCR1O15162 318 aa26.73■■□□□ 1.87
ABCD4-228ENST00000557588 AKAP12Q02952 1782 aa26.72■■□□□ 1.87
ABCD4-228ENST00000557588 BCL9O00512 1426 aa26.72■■□□□ 1.87
ABCD4-228ENST00000557588 SRPK2P78362 688 aaKnown RBP26.71■■□□□ 1.87
ABCD4-228ENST00000557588 ANO8Q9HCE9 1232 aaPredicted RBP26.71■■□□□ 1.87
ABCD4-228ENST00000557588 CENPJQ9HC77 1338 aaPredicted RBP26.69■■□□□ 1.86
ABCD4-228ENST00000557588 DCAF8L1A6NGE4 600 aa26.69■■□□□ 1.86
ABCD4-228ENST00000557588 DDB1Q16531 1140 aa26.69■■□□□ 1.86
ABCD4-228ENST00000557588 NBPF1Q3BBV0 1214 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms